Mulberry crinkle leaf virus
Basic Information
Genomic Organization
JBrowse
Genome
ACAGCCCCCTCGCTTGGTGGCGCCACGTGGCGCCCGTGGATTGGCCCCGAAGGGGCCCACCATTAAATGCGCCGAAGGCGCAATGTGAACCCGACAAAAGGAGGCGGCCGACACAAGAAAAAGAAAAAGAAAAAGAAAAAGAAAAAGGAAAAAGCAAAAGCAGATTCGCCGACAGTTTTTAAAAGTGGGACCCACTAATAATTATTAAAGAGGTTGCTTGCGGAGCAAGGAACCGATGAGCTATAAATACCCCCCCGCCCCAAATATTTTTAAAATGTCTGAGTATTGCGAACTTGCCGAAGACAGTAAGTACTGTACAACGATTTTAATTGTTCAATTTATTGTTATTGCCCTAGCCATTCTCAGTTATGTCTTTGTGGAGTACCAAATTAGGAGAGTTGCCTCAGAGCTTGCAAGGCTGCGTAATTATGCTAGCCTGCAAGCAATTAATGGGCATGGAAGACCAAATCCTGAGCCAGAAAATAGACATGAGAACCGAGACCGGATTCGAGAGTTCAGTGGACCACTTGGTCCACCTTACTCAGTGCCGTAGACTTTTGAGACTGATAAGACGTTTTTCCAGGGTTAAGGACCGTGCTGCAGTAAATGGCGATTACCAGGAGCTCTGCTCTGAGATCAAGGCGGGGATGGAACCCCGGAACGATACCACGCAGGCCCAGAACTGCTCGAGCCACGCGGGTTGCAAGTGTTATGCGAACCCCGTGGAGAAGAAGAGGCCCAAGGTCGAGTTTGGCCAGAAGGAAGAGACGGCCCATAAACGCGTTGGGTCCAGTGAAACGTGGCACATTTGGAATTAAATTAGCCAGTATAAATCATACTGGTGGTAATGGGTATCATTTGACCCATTTTGACCATGGGGATGACACAAACCAAAGAACCGGAAGAAAAATAAAAATTAATGGAATTAACATTAGGGGTAAACTGTTCCTAAATAATCCTAGGACTAATTCTTATCACATTGTCAGGCTGTGGATAATCAGGGATACCAGACCGGGGTCGGAACCGGTGTCGTTCAGCTCGTTCATGGACATGCACGACAACGAGCCAATGACAGCGATGGTGAAGAAGGACTGGGGAGAACGGTTTCAAGTTCTCAAGGATCTGACCTTTCATTTAGTGGGAGCCAATGGTTTATCTTTCAACGAAGACGTGGTCGAGGAGTATTTTAAATTTAAGGGATATGTTTTGTATAATCACGAGGATTCTGGATCCTTGGCAAATGTACTTGAGAATGGCATATTTTTGTACGCAGCAACTTCACATCCGTCTGAGAATGTGACTTTGACTGCTAATTGTCGTGTTTATTTTTATGACGCAGAATAATTAATAAAGTTTATATTTTTTTTACAGATTAAGTTGAATGTTTTCAAGGAAAAAAAAAGAGAAAAAGGATGCCGGAGTCTCCCGACGATTGGACGATCATACCTCTGGATGGGAGTCCCCACAGTCAGGAGGATATGAATCCGGATCCGTTAGATCTAATTATGGTACAGATGGAAGAGATAATTCACAATCTGAATTTAATAGAACAGAGATTGAACGTGCAGTTAGAGCTGTTATCCCTGTTACTGGGTCGGGAGTTTTGTCCCGGCCAGAACAGTTTGAAAGACCAAGTAGATCACTACGGGAAGCACGAGAAAGGGAAGAAAGACTCAAAGAAGCGCAGAGGAGATTAGATGAAGAGTTTGAAAAGGTTGTTCATTCATTAATACTTTTAATAGAATTTATCACTAGCAGACATGTAATAAACTAATACATTATCATCGAACCATGGTTTAAGTGTACTTGCCATCCGTACAACCCAATCCATGTCTTCATTAACTAATACAATACAGGGAATTCCGCCACTAATACGAAAATCCTTCATATACTTGCCCTTAAGAATGATATCCTTTTGAGCACCTAATAATGATTTAAACCAAGAAGTACTAATCTTCTCGTATTCAATATCATCTATTACATTATATAATGCAAAATCATCATAATCTAAAAAACTTAAACTACCGGTAAAATAATTGTGTCTTCCTAAAGATCTGGCCCATTGCGTCTTGCCGGATCTGGTTGGTCCACAGATGTAGAGGCTGATGGGCCTGTCTGGCTTGGACTCGGGCTCCTGTTGCACATATATTGTTGTGGAACAGTTAGGCCCACTTCCCACCAAAAATCATCATGACATCTATAACACAAAACAGAATCGGCCCATTGACGACTTACGAATAGAATATTGTCCTTGGCCCATTGCTGAATAGGTTCAGGTAGGCCCGGGAAGTCAGTCCACCGGGGAACGTAAGGAATACTTCTTCGGCGGTAATGGTCTCTAGCGAAACCGGTAATTGACGGCCATCTGAGAACGTAGTCCTGTGGTCTTCGTTCTCGGACAAGGGCGAGGAAGGACTCCTCGTCTGTTGCCAAGGTAAGGATCTCTCCAAAGATCTTCTCAGCGCTTGCAACAGGACTTCGTCCTCGTGTGTTAAATTCTCCGTGTTCAATGAAGTGACCCTCCTTCTGGATATATTTTCTGACGGCGGCTGGCGAGGAGCACTTCTGGACATTCGGATGGTAGGTGCCCGAGGAGTGTTCCTGCGGCAAATCAAAGAAATTAGGATTTCTTGTTTCTAATTTTTTGTCCAATTGGACAATAGCATGAAAATGACTGTTGTCATCTTTATGTTTTTCTTCAGCCACACAGGCATACTTGACTGTGTATGAATTAAGAATTTGGAGTAAATGGGACATGACCCAAGTAATAGATTCGGGACATTGAGGGAAGGTAAGGAAAACATTCTTGGCAGCCAACCTGAAGTTAGAATTTGAAGCCATTTATAGAAGGGAAGGAGTTGAAAGCCGTACGAAGAGGGGAGAGTAAGGTTCTATAGGTAAGGAGGGATTGGTGGCAGCGGCAAATGAAGCGAGGGGGCCTTATATAATATT
Gene Information
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NCBI Accession
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AKM94181.1
|
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Location
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236-553 |
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Protein Name
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ORF1 |
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Coding Region
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ATGAGCTATAAATACCCCCCCGCCCCAAATATTTTTAAAATGTCTGAGTATTGCGAACTTGCCGAAGACAGTAAGTACTGTACAACGATTTTAATTGTTCAATTTATTGTTATTGCCCTAGCCATTCTCAGTTATGTCTTTGTGGAGTACCAAATTAGGAGAGTTGCCTCAGAGCTTGCAAGGCTGCGTAATTATGCTAGCCTGCAAGCAATTAATGGGCATGGAAGACCAAATCCTGAGCCAGAAAATAGACATGAGAACCGAGACCGGATTCGAGAGTTCAGTGGACCACTTGGTCCACCTTACTCAGTGCCGTAG |
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Protein Sequence
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MSYKYPPAPNIFKMSEYCELAEDSKYCTTILIVQFIVIALAILSYVFVEYQIRRVASELARLRNYASLQAINGHGRPNPEPENRHENRDRIREFSGPLGPPYSVP |
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NCBI Accession
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AKM94182.1
|
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Location
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369-818 |
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Protein Name
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putative movement protein |
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Coding Region
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ATGTCTTTGTGGAGTACCAAATTAGGAGAGTTGCCTCAGAGCTTGCAAGGCTGCGTAATTATGCTAGCCTGCAAGCAATTAATGGGCATGGAAGACCAAATCCTGAGCCAGAAAATAGACATGAGAACCGAGACCGGATTCGAGAGTTCAGTGGACCACTTGGTCCACCTTACTCAGTGCCGTAGACTTTTGAGACTGATAAGACGTTTTTCCAGGGTTAAGGACCGTGCTGCAGTAAATGGCGATTACCAGGAGCTCTGCTCTGAGATCAAGGCGGGGATGGAACCCCGGAACGATACCACGCAGGCCCAGAACTGCTCGAGCCACGCGGGTTGCAAGTGTTATGCGAACCCCGTGGAGAAGAAGAGGCCCAAGGTCGAGTTTGGCCAGAAGGAAGAGACGGCCCATAAACGCGTTGGGTCCAGTGAAACGTGGCACATTTGGAATTAA |
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Protein Sequence
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MSLWSTKLGELPQSLQGCVIMLACKQLMGMEDQILSQKIDMRTETGFESSVDHLVHLTQCRRLLRLIRRFSRVKDRAAVNGDYQELCSEIKAGMEPRNDTTQAQNCSSHAGCKCYANPVEKKRPKVEFGQKEETAHKRVGSSETWHIWN |
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NCBI Accession
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AKM94183.1
|
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Location
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607-1344 |
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Protein Name
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putative coat protein |
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Coding Region
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ATGGCGATTACCAGGAGCTCTGCTCTGAGATCAAGGCGGGGATGGAACCCCGGAACGATACCACGCAGGCCCAGAACTGCTCGAGCCACGCGGGTTGCAAGTGTTATGCGAACCCCGTGGAGAAGAAGAGGCCCAAGGTCGAGTTTGGCCAGAAGGAAGAGACGGCCCATAAACGCGTTGGGTCCAGTGAAACGTGGCACATTTGGAATTAAATTAGCCAGTATAAATCATACTGGTGGTAATGGGTATCATTTGACCCATTTTGACCATGGGGATGACACAAACCAAAGAACCGGAAGAAAAATAAAAATTAATGGAATTAACATTAGGGGTAAACTGTTCCTAAATAATCCTAGGACTAATTCTTATCACATTGTCAGGCTGTGGATAATCAGGGATACCAGACCGGGGTCGGAACCGGTGTCGTTCAGCTCGTTCATGGACATGCACGACAACGAGCCAATGACAGCGATGGTGAAGAAGGACTGGGGAGAACGGTTTCAAGTTCTCAAGGATCTGACCTTTCATTTAGTGGGAGCCAATGGTTTATCTTTCAACGAAGACGTGGTCGAGGAGTATTTTAAATTTAAGGGATATGTTTTGTATAATCACGAGGATTCTGGATCCTTGGCAAATGTACTTGAGAATGGCATATTTTTGTACGCAGCAACTTCACATCCGTCTGAGAATGTGACTTTGACTGCTAATTGTCGTGTTTATTTTTATGACGCAGAATAA |
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Protein Sequence
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MAITRSSALRSRRGWNPGTIPRRPRTARATRVASVMRTPWRRRGPRSSLARRKRRPINALGPVKRGTFGIKLASINHTGGNGYHLTHFDHGDDTNQRTGRKIKINGINIRGKLFLNNPRTNSYHIVRLWIIRDTRPGSEPVSFSSFMDMHDNEPMTAMVKKDWGERFQVLKDLTFHLVGANGLSFNEDVVEEYFKFKGYVLYNHEDSGSLANVLENGIFLYAATSHPSENVTLTANCRVYFYDAE |
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NCBI Accession
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AKM94184.1
|
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Location
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1382-1774 |
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Protein Name
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ORF4 |
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Coding Region
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ATGTTTTCAAGGAAAAAAAAAGAGAAAAAGGATGCCGGAGTCTCCCGACGATTGGACGATCATACCTCTGGATGGGAGTCCCCACAGTCAGGAGGATATGAATCCGGATCCGTTAGATCTAATTATGGTACAGATGGAAGAGATAATTCACAATCTGAATTTAATAGAACAGAGATTGAACGTGCAGTTAGAGCTGTTATCCCTGTTACTGGGTCGGGAGTTTTGTCCCGGCCAGAACAGTTTGAAAGACCAAGTAGATCACTACGGGAAGCACGAGAAAGGGAAGAAAGACTCAAAGAAGCGCAGAGGAGATTAGATGAAGAGTTTGAAAAGGTTGTTCATTCATTAATACTTTTAATAGAATTTATCACTAGCAGACATGTAATAAACTAA |
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Protein Sequence
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MFSRKKKEKKDAGVSRRLDDHTSGWESPQSGGYESGSVRSNYGTDGRDNSQSEFNRTEIERAVRAVIPVTGSGVLSRPEQFERPSRSLREAREREERLKEAQRRLDEEFEKVVHSLILLIEFITSRHVIN |
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NCBI Accession
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AKM94186.1
|
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Location
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NA |
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Protein Name
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putative C1:C2-like Rep protein |
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Coding Region
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GAGCCCGAGTCCAAGCCAGACAGGCCCATCAGCCTCTACATCTGTGGACCAACCAGATCCGGCAAGACGCAATGGGCCAGATCTTTAGGAAGACACAATTATTTTACCGGTAGTTTAAGTTTTTTAGATTATGATGATTTTGCATTATATAATGTAATAGATGATATTGAATACGAGAAGATTAGTACTTCTTGGTTTAAATCATTATTAGGTGCTCAAAAGGATATCATTCTTAAGGGCAAGTATATGAAGGATTTTCGTATTAGTGGCGGAATTCCCTGTATTGTATTAGTTAATGAAGACATGGATTGGGTTGTACGGATGGCAAGTACACTTAAACCATGGTTCGATGATAATGTATTAGTTTATTACATGTCTGCTAGTGATAAATTCTATTAA |
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Protein Sequence
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EPESKPDRPISLYICGPTRSGKTQWARSLGRHNYFTGSLSFLDYDDFALYNVIDDIEYEKISTSWFKSLLGAQKDIILKGKYMKDFRISGGIPCIVLVNEDMDWVVRMASTLKPWFDDNVLVYYMSASDKFY |
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NCBI Accession
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AKM94185.1
|
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Location
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2047-2841 |
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Protein Name
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putative RepA-like protein |
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Coding Region
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ATGGCTTCAAATTCTAACTTCAGGTTGGCTGCCAAGAATGTTTTCCTTACCTTCCCTCAATGTCCCGAATCTATTACTTGGGTCATGTCCCATTTACTCCAAATTCTTAATTCATACACAGTCAAGTATGCCTGTGTGGCTGAAGAAAAACATAAAGATGACAACAGTCATTTTCATGCTATTGTCCAATTGGACAAAAAATTAGAAACAAGAAATCCTAATTTCTTTGATTTGCCGCAGGAACACTCCTCGGGCACCTACCATCCGAATGTCCAGAAGTGCTCCTCGCCAGCCGCCGTCAGAAAATATATCCAGAAGGAGGGTCACTTCATTGAACACGGAGAATTTAACACACGAGGACGAAGTCCTGTTGCAAGCGCTGAGAAGATCTTTGGAGAGATCCTTACCTTGGCAACAGACGAGGAGTCCTTCCTCGCCCTTGTCCGAGAACGAAGACCACAGGACTACGTTCTCAGATGGCCGTCAATTACCGGTTTCGCTAGAGACCATTACCGCCGAAGAAGTATTCCTTACGTTCCCCGGTGGACTGACTTCCCGGGCCTACCTGAACCTATTCAGCAATGGGCCAAGGACAATATTCTATTCGTAAGTCGTCAATGGGCCGATTCTGTTTTGTGTTATAGATGTCATGATGATTTTTGGTGGGAAGTGGGCCTAACTGTTCCACAACAATATATGTGCAACAGGAGCCCGAGTCCAAGCCAGACAGGCCCATCAGCCTCTACATCTGTGGACCAACCAGATCCGGCAAGACGCAATGGGCCAGATCTTTAG |
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Protein Sequence
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MASNSNFRLAAKNVFLTFPQCPESITWVMSHLLQILNSYTVKYACVAEEKHKDDNSHFHAIVQLDKKLETRNPNFFDLPQEHSSGTYHPNVQKCSSPAAVRKYIQKEGHFIEHGEFNTRGRSPVASAEKIFGEILTLATDEESFLALVRERRPQDYVLRWPSITGFARDHYRRRSIPYVPRWTDFPGLPEPIQQWAKDNILFVSRQWADSVLCYRCHDDFWWEVGLTVPQQYMCNRSPSPSQTGPSASTSVDQPDPARRNGPDL |