Miscanthus streak virus

Basic Information

Genus Mastrevirus
NCBI Assembly GCF_000839945.1
Release date 2015/2/12
Submitter Chatani,M., Matsumoto,Y., Mizuta,H., Ikegami,M., Boulton,M.I., Davies,J.W.
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_003379
GGATCCCTATGGTAGCCGTCCTAGCCATCCTGATGATGGTGCACTGCATGGTATACTTGTGGCATTTATTGCGGTGCTTTGCCTCATAGGTTGCCTTTGGGCAGCATACCGACTGTTCCTTAAGGAGTGCCTTACTGATTGCAGTCAGCACACTTCATCAGGCGTCGTCGCGGGTCCTCGTCCGGCTGCAACAGGTCCTACTGCTGTTGTTGTACATAATGGTGCAGAAGCGCAAAGATCTTCGGCGTTCTGATGCCGGTTCTGCCGTTCGGGCCAAACTGCATAAGGCCTCGACTGGGAAGGCCTTCCCTGTAGGGAAGCGGGCTCCTCTGCAGATACGGTCCTATGCATGGGAGACGCCTGCCACGGCGACCACCCCTTCCGGACCTATCAGTATTACTGACGGTACCATCTTCATGTGTAACACCATTGACCCTGGGACTGGAGACGATCAGAGATCGCGGCATACCACGATGCTCTATAAGATGTCATTGAACGTGGTGCTCTGGCCTGGTGCGACTACGGCCCAAATAGTTGGGCCTTTCCGCGTGAACTTCTGGCTTGTGTATGATGCTGCCCCGACTGGAGTTGTCCCGAAGCTGACGGACATCTTTGACGTGGCCTATCCGAAGTGGGGAAACACTTGGCAGGTTTCCCGCTCTAATGTGCATAGGTTCATAGTTAAGCGTAAATGGAAGGTGGACTACCAGTCCTCTGGCGTCCCTGTTGGCAAGAGACAGAGCAGCGGTGTTGAATACGCCCCTGTTAATAATGTGGTGGAGTGCAACAAGTTCTTCGAGAAGCTGCGTGTGAAGACCGAATGGGCGAACACCTCTACCGGTGCAATTGGGGACGTGAAGAAGGGTGCGTTGTACCTGTGTGCCAATACCCGGCAGATGCCTGCTGGTGACTCAGTCACCACGAGTTGTACCACCATGATGCAAGGGTCTACCCGATTGTACTTCAAAGTGCTGGGGAACCAGTAATAATAAAAACTTATTTATTATATATTGCAAACCTGTGGATTACATGATAATGTGAGCGCATTATGCGCGACAACAAACTCAAGAAATTACATAAATTTGGGGGGTAGGGGCAAAGCAGGCGGCTATGGGCGCGCCCGCGGGCAACACACTTAAAAAAAACACAACAATAGATTCACTCTTCGGCCGGCAGGACGTAGAACTTCTGTCCTTCGTACATGTAATGTACGTGGGCGTTCGCGTGCAGGTACTCCACTTGTGCAGGTTTCATGTCCTTGATCCAGTCTTCGTCGTCATTGGTTAGAATGATGGACGGGATTCCCCCAGGGATTTTCTTCTTCTTACCGTACTTGGGATTCACTATGTAGTCACGCTGTGCTCCCACCAGCGCCTTCCACTGCGGCAAGAACTTGAAAGGCACATCGTCGATGACGTTGTAGATTGCATCTTTGTCATAGTGTGTGAAGTCTACGGTTGAGTTGTAGTAGTTGTGCCTCCCGATGTTTCTGGCCCAAGTGGTCTTTCCAGTTCGGCTTGGGCCGCAGATGTATATGCTTCGTGGTCTCCGCGGCCCGTTAGGCTGTATTCAAACCACTGTTGGTTTGTAAGTATTCAAGAAATTTGAAAGAGTGAAGCTTAATCGGTAGTTACCTGGTTCCATTCCTGGTCTATGATGTCAACGAGCTCCGGCGGACAGACGATCTGCTCATTTGGGAACGGTGACTGATATACCGGAGGTGGTTCGGTAAACAAGGCTGCTGCACTGTATTCAAACTGCTGGAGTCTGATGGCCCAGTCAAATGGGAATTCTTTACGGACCATGGACAGGTATTCATTCCTATTGGTGGAGGAGGCTATTATCATAGCCATCCTTTGATCACGGGTAGGCTTCTCGGGTTTCTTGATCCTGAGTTGGAGTTCACCCATTTCATCAGAGTCACCGTTGGTTTTGGATATGTATCCGAAAACCTTTTCAGCATCTCTGACGGGCTGAATGTTTGGGTGGAAACCCTGAACATCAAAGAACTTGGGGTTCCTTGTGCATAGTTTGGTGTTTAGCTGTATAAGGACATGGAGATGCGGGTCCCCGTCCTTATGGAACTCTTGGGATACCTTAATGTATCCTGGAATTTTCTCGGTCAGGCGAGAGAACAATTCCTTCATCAGCTCGGATGGTGTTAGGTTGCAGTGTGGATAGGTAAGGAAGAATTGCTTGCTGTTCCAACGTGGTGTTGGATGGTTTGAAGGACCAGGACGGTTGGATGCTGCAGATGATGCAGGTGCCCTCATCTCTACTACTCTATGGGTGTGGCTCCGATGCTCTCAGAAAACTTGCTACTGGTTTCGCTGGTGCCGGTGCCACCCCTCGTTAGATGGGCTGCGTATTTATAATGGGCCGGCGGGGGAGCGAAACCAATAATATTACCGCTCCCCCTCCCTGGCCCATTAGTAGGCCCCTTGCCTCGGTGCGCTGCGCCTTTGGTCCCCGTTCCTTGCCGCCTTTGGCAGAAGATCGCACTCAGGCTGCTGTAAAATGGCACCGCCATTTGAGTGTTTTTGCTTTGGTGCCTTTGGTTTGCGGCTTTAAAAAGAGGCGGAGGCTCAGAGATCGCACCAAAACCAAAGGTACGCAGGTTGCTTGTCTTCGAACTTGGGTCATTAAGTTTTGCTTCGTTTGTAAGTTTTTAT

Gene Information

NCBI Accession NP_569143.1
Location join(2357-2672,1-89)
Protein Name hypothetical protein
Coding Region ATGGGCTGCGTATTTATAATGGGCCGGCGGGGGAGCGAAACCAATAATATTACCGCTCCCCCTCCCTGGCCCATTAGTAGGCCCCTTGCCTCGGTGCGCTGCGCCTTTGGTCCCCGTTCCTTGCCGCCTTTGGCAGAAGATCGCACTCAGGCTGCTGTAAAATGGCACCGCCATTTGAGTGTTTTTGCTTTGGTGCCTTTGGTTTGCGGCTTTAAAAAGAGGCGGAGGCTCAGAGATCGCACCAAAACCAAAGGTACGCAGGTTGCTTGTCTTCGAACTTGGGTCATTAAGTTTTGCTTCGTTTGTAAGTTTTTATGGATCCCTATGGTAGCCGTCCTAGCCATCCTGATGATGGTGCACTGCATGGTATACTTGTGGCATTTATTGCGGTGCTTTGCCTCATAG
Protein Sequence MGCVFIMGRRGSETNNITAPPPWPISRPLASVRCAFGPRSLPPLAEDRTQAAVKWHRHLSVFALVPLVCGFKKRRRLRDRTKTKGTQVACLRTWVIKFCFVCKFLWIPMVAVLAILMMVHCMVYLWHLLRCFAS

NCBI Accession NP_569144.1
Location join(2671-2672,1-253)
Protein Name hypothetical protein
Coding Region ATGGATCCCTATGGTAGCCGTCCTAGCCATCCTGATGATGGTGCACTGCATGGTATACTTGTGGCATTTATTGCGGTGCTTTGCCTCATAGGTTGCCTTTGGGCAGCATACCGACTGTTCCTTAAGGAGTGCCTTACTGATTGCAGTCAGCACACTTCATCAGGCGTCGTCGCGGGTCCTCGTCCGGCTGCAACAGGTCCTACTGCTGTTGTTGTACATAATGGTGCAGAAGCGCAAAGATCTTCGGCGTTCTGA
Protein Sequence MDPYGSRPSHPDDGALHGILVAFIAVLCLIGCLWAAYRLFLKECLTDCSQHTSSGVVAGPRPAATGPTAVVVHNGAEAQRSSAF

NCBI Accession NP_569145.1
Location 219-986
Protein Name hypothetical protein
Coding Region ATGGTGCAGAAGCGCAAAGATCTTCGGCGTTCTGATGCCGGTTCTGCCGTTCGGGCCAAACTGCATAAGGCCTCGACTGGGAAGGCCTTCCCTGTAGGGAAGCGGGCTCCTCTGCAGATACGGTCCTATGCATGGGAGACGCCTGCCACGGCGACCACCCCTTCCGGACCTATCAGTATTACTGACGGTACCATCTTCATGTGTAACACCATTGACCCTGGGACTGGAGACGATCAGAGATCGCGGCATACCACGATGCTCTATAAGATGTCATTGAACGTGGTGCTCTGGCCTGGTGCGACTACGGCCCAAATAGTTGGGCCTTTCCGCGTGAACTTCTGGCTTGTGTATGATGCTGCCCCGACTGGAGTTGTCCCGAAGCTGACGGACATCTTTGACGTGGCCTATCCGAAGTGGGGAAACACTTGGCAGGTTTCCCGCTCTAATGTGCATAGGTTCATAGTTAAGCGTAAATGGAAGGTGGACTACCAGTCCTCTGGCGTCCCTGTTGGCAAGAGACAGAGCAGCGGTGTTGAATACGCCCCTGTTAATAATGTGGTGGAGTGCAACAAGTTCTTCGAGAAGCTGCGTGTGAAGACCGAATGGGCGAACACCTCTACCGGTGCAATTGGGGACGTGAAGAAGGGTGCGTTGTACCTGTGTGCCAATACCCGGCAGATGCCTGCTGGTGACTCAGTCACCACGAGTTGTACCACCATGATGCAAGGGTCTACCCGATTGTACTTCAAAGTGCTGGGGAACCAGTAA
Protein Sequence MVQKRKDLRRSDAGSAVRAKLHKASTGKAFPVGKRAPLQIRSYAWETPATATTPSGPISITDGTIFMCNTIDPGTGDDQRSRHTTMLYKMSLNVVLWPGATTAQIVGPFRVNFWLVYDAAPTGVVPKLTDIFDVAYPKWGNTWQVSRSNVHRFIVKRKWKVDYQSSGVPVGKRQSSGVEYAPVNNVVECNKFFEKLRVKTEWANTSTGAIGDVKKGALYLCANTRQMPAGDSVTTSCTTMMQGSTRLYFKVLGNQ

NCBI Accession NP_569146.1
Location 1159->1568
Protein Name hypothetical protein
Coding Region CAGCCTAACGGGCCGCGGAGACCACGAAGCATATACATCTGCGGCCCAAGCCGAACTGGAAAGACCACTTGGGCCAGAAACATCGGGAGGCACAACTACTACAACTCAACCGTAGACTTCACACACTATGACAAAGATGCAATCTACAACGTCATCGACGATGTGCCTTTCAAGTTCTTGCCGCAGTGGAAGGCGCTGGTGGGAGCACAGCGTGACTACATAGTGAATCCCAAGTACGGTAAGAAGAAGAAAATCCCTGGGGGAATCCCGTCCATCATTCTAACCAATGACGACGAAGACTGGATCAAGGACATGAAACCTGCACAAGTGGAGTACCTGCACGCGAACGCCCACGTACATTACATGTACGAAGGACAGAAGTTCTACGTCCTGCCGGCCGAAGAGTGA
Protein Sequence QPNGPRRPRSIYICGPSRTGKTTWARNIGRHNYYNSTVDFTHYDKDAIYNVIDDVPFKFLPQWKALVGAQRDYIVNPKYGKKKKIPGGIPSIILTNDDEDWIKDMKPAQVEYLHANAHVHYMYEGQKFYVLPAEE

NCBI Accession NP_569147.1
Location 1620-2273
Protein Name hypothetical protein
Coding Region ATGAGGGCACCTGCATCATCTGCAGCATCCAACCGTCCTGGTCCTTCAAACCATCCAACACCACGTTGGAACAGCAAGCAATTCTTCCTTACCTATCCACACTGCAACCTAACACCATCCGAGCTGATGAAGGAATTGTTCTCTCGCCTGACCGAGAAAATTCCAGGATACATTAAGGTATCCCAAGAGTTCCATAAGGACGGGGACCCGCATCTCCATGTCCTTATACAGCTAAACACCAAACTATGCACAAGGAACCCCAAGTTCTTTGATGTTCAGGGTTTCCACCCAAACATTCAGCCCGTCAGAGATGCTGAAAAGGTTTTCGGATACATATCCAAAACCAACGGTGACTCTGATGAAATGGGTGAACTCCAACTCAGGATCAAGAAACCCGAGAAGCCTACCCGTGATCAAAGGATGGCTATGATAATAGCCTCCTCCACCAATAGGAATGAATACCTGTCCATGGTCCGTAAAGAATTCCCATTTGACTGGGCCATCAGACTCCAGCAGTTTGAATACAGTGCAGCAGCCTTGTTTACCGAACCACCTCCGGTATATCAGTCACCGTTCCCAAATGAGCAGATCGTCTGTCCGCCGGAGCTCGTTGACATCATAGACCAGGAATGGAACCAGGTAACTACCGATTAA
Protein Sequence MRAPASSAASNRPGPSNHPTPRWNSKQFFLTYPHCNLTPSELMKELFSRLTEKIPGYIKVSQEFHKDGDPHLHVLIQLNTKLCTRNPKFFDVQGFHPNIQPVRDAEKVFGYISKTNGDSDEMGELQLRIKKPEKPTRDQRMAMIIASSTNRNEYLSMVRKEFPFDWAIRLQQFEYSAAALFTEPPPVYQSPFPNEQIVCPPELVDIIDQEWNQVTTD