Eragrostis streak virus

Basic Information

Genus Mastrevirus
NCBI Assembly GCF_000872685.1
Isolate Zimbabwe: Guruve
Release date 2015/2/13
Submitter Shepherd,D.N., Varsani,A., Windram,O.P., Lefeuvre,P., Monjane,A.L., Owor,B.E., Martin,D.P., Shepherd,D., Martin,D., Windram,O., Monjane,A., Owor,B.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_010352
ACCGCGCTTTCTCATGCGAGGCCCACAAGGCCGAGCGGTCCCGGCTATGGTGCGTTTGCTTTTGTAGGGCTGCCCGTTTCAGAGGGCCGCGTTTGAATCGCATTATAAGTACTGTCTCCGGTGCGATCTCTGCATGGAGAGCTTTGAAGGAGCGGGTTCCTTTGTCCCCCAGGTTGCTTTGCCTCGTGTCCCCCCCGCAGCTCCGTCAGTCCCCAGTCTGCCGTGGAGTAGCGTCGGTGAGATAGCTATATTCATCTTTGTTGCAGTGCTAGCGCTTTACTTGCTTTGGATCTGGGTGGTGAGAGATTGTCTCTTCGTTGTTAAGGCTCGCCAAGGCGGATCAACGGAGGAGCTGCAGTTCGGGCCCAGGGAGCGCCCACCTGTCCCTGCTGGTGACAGGCCTCCTTTGCCTCCGGCTGTATCGGTTGCTACTACCAGTGAGACTAGACCTTTCTCGGTCTAGTCGGCCTTCAGCATGCCTCTTACCGCCGGGAAACGGAAGAGGTCAGGTGATGCGTCCAGTTCTAAGGTTGCTCGGCCGAAGCTCGGGCGTTCATCTGCCGCCCGTGCTGGTAAACCTAGTACTAGGGCTCGTCCATCCCTGCAGATCCAGACGCTTCAGGCGGCTGGACAGTCAATGATATCTGTCCCGTCTGGTGGCGTTTGTGATTTGCTTGGCTCGTTTGCCCGAGGATCCGATGAGGGCAACCGCCACACCAACGAGACTGTAACATACAAGGTAGCCCTCGACTATCATTTCGTGGCTACTGCAGGTGCCTGCAAGTATTCAAGTATCGGCACTGGCGTGGTGTGGTTGGTGTATGACGCACAGCCTCAGGGGAACTGTCCCCAGGTAAAGGATATTTTCCCGCATCCTGATTCCTTGAGCGCCTTCCCGTATACCTGGAAGGTTGGAAGAGAGGTGTGCCACCGGTTCGTGGTGAAGCGGCGATGGCTGTTCACGATGGAGACCAACGGGAGGATTGGTTCGGATACCCCTGGCCCTACCAGTTGCTGGCCCCCGTGCCGCAAGAACATTTACTTCCACAAGTTTGAAGCCGGCTTAGGGGTGAAAACGGAGTGGAAGAACACTACAGGCGGAGACGTCGGTGACATTAAGAAGGGTGCCCTGTATATTGTAATTGCCCCAGGCAATGGGCTCGAATTCACCGTGCATGGTAATGCTCGGTTGTACTTTAAGAGTGTTGGGAATCAGTGAGTCCCATGAATAATAAAACTTGTTTTAATATTTGTATGATTATTACGCCGAAGGCGTTGAATTACACAGTCCGCCGATGGGCGGACAGAAAATACACACAAACCAAAATAGGCGGTCAGATCGTGGCGGATAAGGGATAGCGAAGGAAAAAAATAAAACAAACCAAACTGACATTATTACATTGGTCGGCGCTCAGACTTCGATAGAAGGATGGGCTGTAGCTGACACCGCTGGCCCGCCGAAGAACCGTTCACCCGGTTCAAGGATGTATACAGTGCAGTTTGCATTGAAATAGTCCTGCTGTGCAGGCGTCATGTCCTTCAGCCAATCCTCATCCACATTGGCAAGCACTATTGTGGGGATGCTTTTCTTGGCCACCTTCTTGCGTTTCCCATATTTAGGGTTTACAATGTAATCTTTTTGGCAGCCAATTAACTGCTTCCAACATGGACAGAACTTGAAAGGGATGTCGTCTATGATGTTGAAGACTGCGTCCTCGTCGTATGAGGTCCAGTCGACGTTGTTCTGCCAGTAATTATGTCGTCCCAGGCTTCTGGCCCAAGTGGACTTTCCTGTTCTTGTTGGGCCGAGGATGTAGAGGCTCTGCTTCCTTGTTCCTGGAATATTCTGGATGTATGAGACATCCATTCGAGGTCAAAGGCTGCATCTTCAAGGCTTAAGCAGTCTGGATTCAGGAGCATGTATGCTTGGGGACTAACCTGGTATATGTTGGTGTAAACCCAGGACTGGATAGTTTCCCCATCTTGGAGCTGTGGTGCTGTAGGTGGATGTGGGTTGGTGTACGTTTCCTGTATCTCAGGAAACAGTCTGTTGGCTGAATACTCAAAGTATTGTAGCTTGGTTGCCCATTCGTAAGGGAGTGCCTTCTGTATCATAGAGAGGTACTCTTGCTTTGAGGTGGAGTGTTCGATGATATCTCTCACGATATCATCCTTGGATTGCTTAGTGGTGTTCCCCTCTGAGGTAGAGCCAAGGAAGGTTTTCTTCCTTGGTATGAATGTACCTCTCTCCCACACCTTCAGTGGGTTCTTCAATACGTAATCCCTTACCTTGTTAGCACTCTTTGCAGCTTGTATGTTGGGGTGGTAGTCTTCGATGTCGAAGAACCTTTCATCATGGGTGTAGACAGGCTTGACGCTCTGAGCTAAGGCATGCAGATGCCATGACCCATCTTGATGAGCTTCCCTACTCACCACGATGTATGCAGGAGTCCATGACTCTAAGAGACTCCATAGCACCAGACCTACGACTTCAGGCTCTAAGGTGCAGTGAGGGTATGTCAGGAAGGTGTTGACATTGCGGTGCTTGAAGCGACGCGTAGGAGCTGAAGGCACAGTTGATGCTATGCTCGACATCTCTACTGCTGGTCTGGAATGGAGGCTCCCAACAAACTCTCCTACGGTTTGCGAATCGAAATAACGCACAGCTGCTGCTTTATAGTACTCTAGGTGGGTTGGGCCTAATGAGTTTTTGGGCCGCAATGAGAAAGCGCAAACCAATAATATT

Gene Information

NCBI Accession YP_001686792.1
Location 134-463
Protein Name movement protein
Coding Region ATGGAGAGCTTTGAAGGAGCGGGTTCCTTTGTCCCCCAGGTTGCTTTGCCTCGTGTCCCCCCCGCAGCTCCGTCAGTCCCCAGTCTGCCGTGGAGTAGCGTCGGTGAGATAGCTATATTCATCTTTGTTGCAGTGCTAGCGCTTTACTTGCTTTGGATCTGGGTGGTGAGAGATTGTCTCTTCGTTGTTAAGGCTCGCCAAGGCGGATCAACGGAGGAGCTGCAGTTCGGGCCCAGGGAGCGCCCACCTGTCCCTGCTGGTGACAGGCCTCCTTTGCCTCCGGCTGTATCGGTTGCTACTACCAGTGAGACTAGACCTTTCTCGGTCTAG
Protein Sequence MESFEGAGSFVPQVALPRVPPAAPSVPSLPWSSVGEIAIFIFVAVLALYLLWIWVVRDCLFVVKARQGGSTEELQFGPRERPPVPAGDRPPLPPAVSVATTSETRPFSV

NCBI Accession YP_001686793.1
Location 476-1219
Protein Name coat protein
Coding Region ATGCCTCTTACCGCCGGGAAACGGAAGAGGTCAGGTGATGCGTCCAGTTCTAAGGTTGCTCGGCCGAAGCTCGGGCGTTCATCTGCCGCCCGTGCTGGTAAACCTAGTACTAGGGCTCGTCCATCCCTGCAGATCCAGACGCTTCAGGCGGCTGGACAGTCAATGATATCTGTCCCGTCTGGTGGCGTTTGTGATTTGCTTGGCTCGTTTGCCCGAGGATCCGATGAGGGCAACCGCCACACCAACGAGACTGTAACATACAAGGTAGCCCTCGACTATCATTTCGTGGCTACTGCAGGTGCCTGCAAGTATTCAAGTATCGGCACTGGCGTGGTGTGGTTGGTGTATGACGCACAGCCTCAGGGGAACTGTCCCCAGGTAAAGGATATTTTCCCGCATCCTGATTCCTTGAGCGCCTTCCCGTATACCTGGAAGGTTGGAAGAGAGGTGTGCCACCGGTTCGTGGTGAAGCGGCGATGGCTGTTCACGATGGAGACCAACGGGAGGATTGGTTCGGATACCCCTGGCCCTACCAGTTGCTGGCCCCCGTGCCGCAAGAACATTTACTTCCACAAGTTTGAAGCCGGCTTAGGGGTGAAAACGGAGTGGAAGAACACTACAGGCGGAGACGTCGGTGACATTAAGAAGGGTGCCCTGTATATTGTAATTGCCCCAGGCAATGGGCTCGAATTCACCGTGCATGGTAATGCTCGGTTGTACTTTAAGAGTGTTGGGAATCAGTGA
Protein Sequence MPLTAGKRKRSGDASSSKVARPKLGRSSAARAGKPSTRARPSLQIQTLQAAGQSMISVPSGGVCDLLGSFARGSDEGNRHTNETVTYKVALDYHFVATAGACKYSSIGTGVVWLVYDAQPQGNCPQVKDIFPHPDSLSAFPYTWKVGREVCHRFVVKRRWLFTMETNGRIGSDTPGPTSCWPPCRKNIYFHKFEAGLGVKTEWKNTTGGDVGDIKKGALYIVIAPGNGLEFTVHGNARLYFKSVGNQ

NCBI Accession YP_001686794.1
Location 1693-2595
Protein Name RepA
Coding Region ATGTCGAGCATAGCATCAACTGTGCCTTCAGCTCCTACGCGTCGCTTCAAGCACCGCAATGTCAACACCTTCCTGACATACCCTCACTGCACCTTAGAGCCTGAAGTCGTAGGTCTGGTGCTATGGAGTCTCTTAGAGTCATGGACTCCTGCATACATCGTGGTGAGTAGGGAAGCTCATCAAGATGGGTCATGGCATCTGCATGCCTTAGCTCAGAGCGTCAAGCCTGTCTACACCCATGATGAAAGGTTCTTCGACATCGAAGACTACCACCCCAACATACAAGCTGCAAAGAGTGCTAACAAGGTAAGGGATTACGTATTGAAGAACCCACTGAAGGTGTGGGAGAGAGGTACATTCATACCAAGGAAGAAAACCTTCCTTGGCTCTACCTCAGAGGGGAACACCACTAAGCAATCCAAGGATGATATCGTGAGAGATATCATCGAACACTCCACCTCAAAGCAAGAGTACCTCTCTATGATACAGAAGGCACTCCCTTACGAATGGGCAACCAAGCTACAATACTTTGAGTATTCAGCCAACAGACTGTTTCCTGAGATACAGGAAACGTACACCAACCCACATCCACCTACAGCACCACAGCTCCAAGATGGGGAAACTATCCAGTCCTGGGTTTACACCAACATATACCAGGTTAGTCCCCAAGCATACATGCTCCTGAATCCAGACTGCTTAAGCCTTGAAGATGCAGCCTTTGACCTCGAATGGATGTCTCATACATCCAGAATATTCCAGGAACAAGGAAGCAGAGCCTCTACATCCTCGGCCCAACAAGAACAGGAAAGTCCACTTGGGCCAGAAGCCTGGGACGACATAATTACTGGCAGAACAACGTCGACTGGACCTCATACGACGAGGACGCAGTCTTCAACATCATAG
Protein Sequence MSSIASTVPSAPTRRFKHRNVNTFLTYPHCTLEPEVVGLVLWSLLESWTPAYIVVSREAHQDGSWHLHALAQSVKPVYTHDERFFDIEDYHPNIQAAKSANKVRDYVLKNPLKVWERGTFIPRKKTFLGSTSEGNTTKQSKDDIVRDIIEHSTSKQEYLSMIQKALPYEWATKLQYFEYSANRLFPEIQETYTNPHPPTAPQLQDGETIQSWVYTNIYQVSPQAYMLLNPDCLSLEDAAFDLEWMSHTSRIFQEQGSRASTSSAQQEQESPLGPEAWDDIITGRTTSTGPHTTRTQSSTS

References More References in PubMed

1

Eragrostis minor streak virus: an Asian streak virus in Africa.

Martin DP, et al.  Arch Virol. 2011 Jul;156(7):1299-303. doi: 10.1007/s00705-011-1026-8. Epub 2011 May 26.

PMID: 21614438
2

Identification and molecular characterization of a novel sugarcane streak mastrevirus and an isolate of the A-strain of maize streak virus from sugarcane in Nigeria.

Yahaya A, et al.  Arch Virol. 2017 Feb;162(2):597-602. doi: 10.1007/s00705-016-3148-5. Epub 2016 Nov 4.

PMID: 27815694
3

Molecular diversity, geographic distribution and host range of monocot-infecting mastreviruses in Africa and surrounding islands.

Kraberger S, et al.  Virus Res. 2017 Jun 15;238:171-178. doi: 10.1016/j.virusres.2017.07.001. Epub 2017 Jul 4.

PMID: 28687345
4

A highly divergent South African geminivirus species illuminates the ancient evolutionary history of this family.

Varsani A, et al.  Virol J. 2009 Mar 25;6:36. doi: 10.1186/1743-422X-6-36.

PMID: 19321000
5

Establishment of three new genera in the family Geminiviridae: Becurtovirus, Eragrovirus and Turncurtovirus.

Varsani A, et al.  Arch Virol. 2014 Aug;159(8):2193-203. doi: 10.1007/s00705-014-2050-2. Epub 2014 Mar 22.

PMID: 24658781