Eleusine indica associated virus
Basic Information
| Genus |
Mastrevirus
|
| NCBI Assembly |
GCF_018585455.1 |
| Isolate |
Reunion |
| Release date |
2021/6/1 |
| Submitter |
Claverie,S., Ouattara,A., Hoarau,M., Filloux,D., Varsani,A., Roumagnac,P., Martin,D.P., Lett,J.M., Lefeuvre,P. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACGATTTGGCCCGTGAAGCGACGGCCGCCGTGTGCGCTCTACGGCGGACGGAGCGGTAGGCAAAGATGCTGCTTTGCACGAAATGTCGTTGTCTGTCTTTAATAATTGATGCTTTACGCGTCATTCTTTATAAAAGAAGGGGGCCCACACACAGCTTTAAGATGGGGAGGGCATCGCACTATCAGGTATTCACTCCTTCGTCCTCCTGGGTTGTGTCCCAATCTCCTCCCGAGGTCGTGGCGAGCTCGGATCCGTGGTTCCGCGTGATATATATCTTGGTTATTTCCCTAATTATTTTAGGGACTATATACCTTGCCTATCGGTGGTTCATACGTGATGTCGTCATACTGTTTAGGGCGAAGAGACAGCGGAGCACGGAAGAGATTGGTTTCGGCAATACTCCAGCTCGGGCCGACGGTGGATTCTCTCTCACCGGACGAGGAACTGCTTCCGCGGCTCCAGTTCCTCCTGTCTAGGGCTCTTCTCCTGCTTGAGGAGGTAGAGGCCGATGGCGAAGGTGATGAAACGCAAGAGGTCCCGTCCGGGGGACGAGGTAGCCTGGACCAAGCGGTCAAGGTGGAGCGCTTCGAAGGTTCCTTCCAAGGGAAGCACTAGTAGGACTAGGGTACGTCCTAGTCTTCAGATACAGGAGCTGGTACAGACAGGTAACAGTAAGTTGGAGGTTAAAAATGGTGGATCGTGCCTTCTTCTTGGCACGTTCGCACGTGGCGCTGATGAGGGTCAGCGACACACAAACGAGACTATGATATACAAGGTTGCCATAGACATGCATTTCTCTGTGACAGCAGCGGCTGCAGCGTACTCTAACCAGGGTACTGGGGTCGTTTGGTTGATCTATGATTCACAGCCGACCGGAACTCAGCCCACTCTGAAGGATATCTTCGCCTATGATACCAACCAGGTATCGTGGCCTTACCTTTGGAAGGTTTCAAGGGAGGCGTGTCATAGGTTCGTCGTGAAGAGACGTTACACGTTCTACCTGGAGACGAATGGAAGGAGGAACGATGAGGTTCCACCCCAGAATGCAGTCTGGGCTCCATGTAAAACTAGTTGTTACTTCCACAAGTTTGCTAAAGGGTTAGGTGTGCGAACTGAGTGGAAGAACAACACAGACGGGGGCATTGGGTCGATTAAGAAAGGTGCGTTGTATTTTGCCATAGCACCTGGCAATGGGATAGAGTTTAATCTTTTTGGAAGGAACCGTCTGTACTTCAAATCTATTGGTAATCAATAAGATATGTATGGAATGTTATTATTATAATGACATTTGGTTGTCAAGAAATAAGACAAAAACATACTCGGCGGCAGATCGTGGCGGCTATGGGATAGCGAAGGAAAAAAACACCCGGAAAAAACTCAGCTTTGTGAAAATGGTCAGCGCGTCGTCGAGCTTGCGAGTGACGCTGTAGCTGACACGGCTGGCCGCTTAGGCTAAGAAAAGAATCGTTCACCCGATTCCATTACATAGATGTCACAATTACATTCAAAATACTCCAGCTGTGCTGGAGTCATACATTTCATCCAATCCTCATCATTATTTACTAATATGATGCTAGGAATTCCTCCAGGAATTCATTTCTTCTTCCCGTACTTGGGGTTGACGGTGAAGTCTCGTTGGCCCCCGACCAGCTGTTTCCAACAGGGGCAGAACTTGAAGGGTATGTCGTCGATGACGTTATACTTAGCGTCCTTGTTGTAGCATGTGAAATCGACGCAGTTCTGCCAGTAGTTATGATGGGAAGGAGCTATGCTCCTGGCCCATGTTGTCTTACCGGTCCTTGTTGGACCGACGATGTAGAGGCTCCTTGGTCGAGAAGGCCTTTCTGCAGCATCTCCCTAGATGTGTTGTGCATCCAGTAGAGATCGTTAACAGCCTGCTCAATTGTTACCACATGTGGTGAATGAACCATGTAGACATACGGATGTACCTGATAGATGTTTTCGGTCATCCATGTTTCAATGGTCTCGTAACAATGGAGGTCGGGTGTGGTAACTGGATGAGGAGGGATGAATGGAGCCTCTGTTGTTGGAAACAACCTCTCGGCTGAGTATTCGAAATGCTGTAATTTCGTGGCCCAGTCGAATGGGAAGGCTTTCTGCACCATGGATAAATCCCCCCCTGGGGATAAATACTCCCCTCTCATACTTAGTGATTGGATTCTTAAGGATATACTCTCTAGTTTTATTTGGAGAGCGTGAAGGCTGGATGTTAGGGTGATGACCCTGAATGTCAAAAAAACTAGGATCCCTAGTTTTAACAGGCTTATCAGTTTGGAGAAGACAGTGGAGATGAGGAGTATTATCCTGGTGGAACTCAGAAGAAATAATAATATAAATAGGATTGTAAGGACGTGCCTTACCCCAGAGAAATTCACCTGCTTCCTGCGGTGAAACGGAGCAGTGTGGATAGGTGAGGAAGATGTTGGCGCTTCGGAGATGGAATGAACGGCTAGTGGACCCGACATGGAAGTCTCTGACGGACTGGTGGGGCAGAGATGGCAGAGAGTCAGATGAACTCATCGTTTCTCTGGTGGTCTTCTGGCGGCTTAGCAACTAACCGTCAGCTCCGCTGCGCGAACTCTATGATACGATTTGGTTCGTGTTCGTGCTCACCCCCGTGCCTTAAAGAGTGTGCTGGATGGGCCCTATTGGGCCCGCCTGTCGCGATCACGGGCCAAATCCTTTTAATATT
Gene Information
|
NCBI Accession
|
YP_010087738.1
|
|
Location
|
66-476 |
|
Protein Name
|
movement protein |
|
Coding Region
|
ATGCTGCTTTGCACGAAATGTCGTTGTCTGTCTTTAATAATTGATGCTTTACGCGTCATTCTTTATAAAAGAAGGGGGCCCACACACAGCTTTAAGATGGGGAGGGCATCGCACTATCAGGTATTCACTCCTTCGTCCTCCTGGGTTGTGTCCCAATCTCCTCCCGAGGTCGTGGCGAGCTCGGATCCGTGGTTCCGCGTGATATATATCTTGGTTATTTCCCTAATTATTTTAGGGACTATATACCTTGCCTATCGGTGGTTCATACGTGATGTCGTCATACTGTTTAGGGCGAAGAGACAGCGGAGCACGGAAGAGATTGGTTTCGGCAATACTCCAGCTCGGGCCGACGGTGGATTCTCTCTCACCGGACGAGGAACTGCTTCCGCGGCTCCAGTTCCTCCTGTCTAG |
|
Protein Sequence
|
MLLCTKCRCLSLIIDALRVILYKRRGPTHSFKMGRASHYQVFTPSSSWVVSQSPPEVVASSDPWFRVIYILVISLIILGTIYLAYRWFIRDVVILFRAKRQRSTEEIGFGNTPARADGGFSLTGRGTASAAPVPPV |
|
NCBI Accession
|
YP_010087739.1
|
|
Location
|
509-1255 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGGCGAAGGTGATGAAACGCAAGAGGTCCCGTCCGGGGGACGAGGTAGCCTGGACCAAGCGGTCAAGGTGGAGCGCTTCGAAGGTTCCTTCCAAGGGAAGCACTAGTAGGACTAGGGTACGTCCTAGTCTTCAGATACAGGAGCTGGTACAGACAGGTAACAGTAAGTTGGAGGTTAAAAATGGTGGATCGTGCCTTCTTCTTGGCACGTTCGCACGTGGCGCTGATGAGGGTCAGCGACACACAAACGAGACTATGATATACAAGGTTGCCATAGACATGCATTTCTCTGTGACAGCAGCGGCTGCAGCGTACTCTAACCAGGGTACTGGGGTCGTTTGGTTGATCTATGATTCACAGCCGACCGGAACTCAGCCCACTCTGAAGGATATCTTCGCCTATGATACCAACCAGGTATCGTGGCCTTACCTTTGGAAGGTTTCAAGGGAGGCGTGTCATAGGTTCGTCGTGAAGAGACGTTACACGTTCTACCTGGAGACGAATGGAAGGAGGAACGATGAGGTTCCACCCCAGAATGCAGTCTGGGCTCCATGTAAAACTAGTTGTTACTTCCACAAGTTTGCTAAAGGGTTAGGTGTGCGAACTGAGTGGAAGAACAACACAGACGGGGGCATTGGGTCGATTAAGAAAGGTGCGTTGTATTTTGCCATAGCACCTGGCAATGGGATAGAGTTTAATCTTTTTGGAAGGAACCGTCTGTACTTCAAATCTATTGGTAATCAATAA |
|
Protein Sequence
|
MAKVMKRKRSRPGDEVAWTKRSRWSASKVPSKGSTSRTRVRPSLQIQELVQTGNSKLEVKNGGSCLLLGTFARGADEGQRHTNETMIYKVAIDMHFSVTAAAAAYSNQGTGVVWLIYDSQPTGTQPTLKDIFAYDTNQVSWPYLWKVSREACHRFVVKRRYTFYLETNGRRNDEVPPQNAVWAPCKTSCYFHKFAKGLGVRTEWKNNTDGGIGSIKKGALYFAIAPGNGIEFNLFGRNRLYFKSIGNQ |
|
NCBI Accession
|
YP_010087740.1
|
|
Location
|
1767-2486 |
|
Protein Name
|
RepA |
|
Coding Region
|
ATGTCGGGTCCACTAGCCGTTCATTCCATCTCCGAAGCGCCAACATCTTCCTCACCTATCCACACTGCTCCGTTTCACCGCAGGAAGCAGGTGAATTTCTCTGGGGTAAGGCACGTCCTTACAATCCTATTTATATTATTATTTCTTCTGAGTTCCACCAGGATAATACTCCTCATCTCCACTGTCTTCTCCAAACTGATAAGCCTGTTAAAACTAGGGATCCTAGTTTTTTTGACATTCAGGGTCATCACCCTAACATCCAGCCTTCACGCTCTCCAAATAAAACTAGAGAGTATATCCTTAAGAATCCAATCACTAAGTATGAGAGGGGAGTATTTATCCCCAGGGGGGGATTTATCCATGGTGCAGAAAGCCTTCCCATTCGACTGGGCCACGAAATTACAGCATTTCGAATACTCAGCCGAGAGGTTGTTTCCAACAACAGAGGCTCCATTCATCCCTCCTCATCCAGTTACCACACCCGACCTCCATTGTTACGAGACCATTGAAACATGGATGACCGAAAACATCTATCAGGTACATCCGTATGTCTACATGGTTCATTCACCACATGTGGTAACAATTGAGCAGGCTGTTAACGATCTCTACTGGATGCACAACACATCTAGGGAGATGCTGCAGAAAGGCCTTCTCGACCAAGGAGCCTCTACATCGTCGGTCCAACAAGGACCGGTAAGACAACATGGGCCAGGAGCATAG |
|
Protein Sequence
|
MSGPLAVHSISEAPTSSSPIHTAPFHRRKQVNFSGVRHVLTILFILLFLLSSTRIILLISTVFSKLISLLKLGILVFLTFRVITLTSSLHALQIKLESISLRIQSLSMRGEYLSPGGDLSMVQKAFPFDWATKLQHFEYSAERLFPTTEAPFIPPHPVTTPDLHCYETIETWMTENIYQVHPYVYMVHSPHVVTIEQAVNDLYWMHNTSREMLQKGLLDQGASTSSVQQGPVRQHGPGA |