Axonopus compressus streak virus
Basic Information
| Genus |
Mastrevirus
|
| NCBI Assembly |
GCF_000920415.1 |
| Isolate |
Nigeria |
| Release date |
2015/2/22 |
| Submitter |
Oluwafemi,S., Kraberger,S., Shepherd,D.N., Martin,D.P., Varsani,A. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ATGTTCTATCGGATGGAGAGGGGTCCTTTACCGCAGGTAAGCTCCGTCTATGTTCTGAGTCCCCCAGCCGGACCCGCCCCGACGACTTTCGTCGGGAACGACGGAGCGTGGAGGTTCTTGGTTCTCTTGCTTGCCTGTACAGCGTTGGCTGGTGGGACGCTTTTCGCCTGCTGGCGGCTTTTGGGAAAGGATCTGCTCCTTACCTTGAAGGCTCGCCGGAGCCGCACGGTGACGGAGTTAGGGTTCGGCCAGACGCCCCCCGGGCGTCAGGCTGGAGCAGGTTCTCAACCGGTGGGCCCGTTCGGCTAATAACAGGGGTAGTGTTTCTCACTTCTCTGCAGGATCCCGCCCTAATTGGAGCGCTGTCATGCCTTCTACCTCGGCGCCTCGCAGGCGTCGCCGGAACGATGATTGGGCGTGGGACTCGGCAACTCGCCGTCGTGTACGGCCAAGGACAGGTTATGTACCTAGAGGTCCTAGGAGGAACAAATTGCCTAGCCTGCAGGTGGATCAGGACGTATATGCCGCCGCCACGGCGATTGATGTTAATACGCACGGTGCTGATGTCAGCCTCCTGACGAACTTCCTCCGCGGGACCTCGGAAGATGCCCGGCACACCAACGAGACTATTCTGTACAAGCTCAGCCTGGACCTGTATATCATGGTGGATGATGTCCATCAGGTTTATTCAGGGAAGTCAGTTTGCTGCTGTTGGTTGGTGTACGATGCACAGCCTACCGGTGCTCTCCCGGATGGATCTTCGATCTTCAGCTACAACGCTGACCTGCTGTCTCAGCCTGCCGTCTGGAAGGTGGGCAGGGAGGTGTGTCATCGCTTTGTGGTGAAGCGTCGATGGGTCTTTACTCTAGAGACCAATGGGTGTAAGGCCGGTACGCTGTTTACAAATACAGCCGGTACTATGGGGATACCTCCGTGCAACCGTTCCATATACTTCCACAAGTTCTGCAAGCGTCTCGGCGTAAGAACTGAGTGGAAGAATAGCTCTGGGGGTACCATAGGTGACATTAAAACGGGTGCGTTTGTATCTTGTGTTTGCACCTGGCAACGCCATGGGCCATAAAGTTCAGGGTGTTGTAAGAAAGTACTTCAAGTCCGTGGGTAACCAGTAAAACGGTTACATGTAAAATAGTTTGTAATAAAACGGCAGTTTTATTCATTACAATACCAGTGGCTGCGCTGAGCAGCGATTTTGTACATAATATGGGGGGACAGGACAAAGCAGGCGGCTATAGGGCGCGCATGGGGTAGTCCTCAATAAACGCACCCAACTGAACTCTAGATACATTCCTCCGACGTCGATGAGACGTCGTCCTTTATGAAGGAATCCCCTTCATAGAGGTATACTACTACACAGTTGCGTTCGAAGTACGAACGCTGAGACGCAGTCATGGCGCGCATCCAGTCTTCGTCATCGTTAACGATGACTATTGAGGGGATACCCCCCTTTATTAGCTTCTTCTTTCCGTATTTTGGGTTGACAGTGAAGTCCTTCTGTCCGCCGATGAGCGCCTTCCAACAAGGACAGTACTTGAATGGGATGTCGTCTATCACGTTGTATTTGGCTTCCACGTCATATGACGTGAAGTCTACATTATTTTGCCAGTAGTTGTGTCGTCCCAGGCTTCGGGCCCATGTTGATTTGCCTGTCCTTGTTGGTCCACAGATGTAGAGGGAGAGGGGTCTTGCCTGTTCATAACGGTGTTATGAAGCCATTGAAGATCCTCCTGTGCGTTAGCATATGGGTGGAGCAACGAATATACCTCCGGAGTTATCTCGTAGATGTTGTCACGGACCCAATCATGTATATTTTCATGACAGTGAAAATAGGAGTCCGGAAACGGAGGTTGATAGACCGCCGGTGTGTCGAAGAGCTTGTTGGCAGCGTATTCCCAGTTCTGCAGCCTTGCGCAGAAGTCGTACGGGAATGCCTTCTTGACCCCGTTGAGGAACTCCTGCTTACTGGAGGACCCCGCGAGAATTGACGTCATTAAGACGTCCTTTCTATCTCTTCCGGGGTCGTTGGCCAGCTCCCTGGATCGTGATCCTCGTCGTTGATCGGCCTGGGGAGGTGAAGAGCTTGACGAAGCGCCTCCTCCAGCTGTATCCTCTCCAATGCCACACGCAGCATCTGCGCGTGTTCCGCGGGGCCGTAAGGAGCCGTAATTGAATGTTCCTGTTGGAGATTTGAGTATATACGACAGTACAGTCTGTGGACTTCTAGCACTCTGGATATTTGGATGAAAACCTTGTACATCAAAAAAACCAGGGCTATATGTGTGCACACGTTTGTCAGTTTGAGCAAGAGCATGAATATGGGGAGTCCCATCCTTATGAAGCTCGCTAGTAACAGTGATAAACATAACATGGTAAGGTGAGAGTAGGCTGAGTAGGAAGGAACCGATAAGTTCCGGAGCCAGGTTACACCTGGGATATGTGAGGAATATGTTTCTGGATTGAAACCTGAATCCTGATGGCCCTCCATGCTCAGTGTTGTTCATAGAGCGGAAGCTTCCAACACTTAGCCAAAATTTCCGCTCTCGAGTGTTTTATGTCTTACCTCCGTTTGCCCAAGTGCCCAAGGCGGGCCTTGGTGGGTTTATATAGCCCCCGGCTCTTAGGTGGGCTGGGCCGAAAGGGCGAACGGTAGCGACCGCGAGGGAGCGCCCATAATATTACCGTTCGCCCTTTTCGGCCGAGGGGACATTCGTGCGCTCTGAATGGCCCCGAGGCGTTTGCCTGTTCTGTCAGCTTTATCTTTAAGGAAAGGTGGCGCATTTTCGTGGTGATTGCTTGCTAAGCAAGCGTTAGTGGACTATAAAGGGAGGCTGGTGGATGAG
Gene Information
|
NCBI Accession
|
YP_009021761.1
|
|
Location
|
1-309 |
|
Protein Name
|
movement protein |
|
Coding Region
|
ATGTTCTATCGGATGGAGAGGGGTCCTTTACCGCAGGTAAGCTCCGTCTATGTTCTGAGTCCCCCAGCCGGACCCGCCCCGACGACTTTCGTCGGGAACGACGGAGCGTGGAGGTTCTTGGTTCTCTTGCTTGCCTGTACAGCGTTGGCTGGTGGGACGCTTTTCGCCTGCTGGCGGCTTTTGGGAAAGGATCTGCTCCTTACCTTGAAGGCTCGCCGGAGCCGCACGGTGACGGAGTTAGGGTTCGGCCAGACGCCCCCCGGGCGTCAGGCTGGAGCAGGTTCTCAACCGGTGGGCCCGTTCGGCTAA |
|
Protein Sequence
|
MFYRMERGPLPQVSSVYVLSPPAGPAPTTFVGNDGAWRFLVLLLACTALAGGTLFACWRLLGKDLLLTLKARRSRTVTELGFGQTPPGRQAGAGSQPVGPFG |
|
NCBI Accession
|
YP_009021762.1
|
|
Location
|
368-1081 |
|
Protein Name
|
capsid protein |
|
Coding Region
|
ATGCCTTCTACCTCGGCGCCTCGCAGGCGTCGCCGGAACGATGATTGGGCGTGGGACTCGGCAACTCGCCGTCGTGTACGGCCAAGGACAGGTTATGTACCTAGAGGTCCTAGGAGGAACAAATTGCCTAGCCTGCAGGTGGATCAGGACGTATATGCCGCCGCCACGGCGATTGATGTTAATACGCACGGTGCTGATGTCAGCCTCCTGACGAACTTCCTCCGCGGGACCTCGGAAGATGCCCGGCACACCAACGAGACTATTCTGTACAAGCTCAGCCTGGACCTGTATATCATGGTGGATGATGTCCATCAGGTTTATTCAGGGAAGTCAGTTTGCTGCTGTTGGTTGGTGTACGATGCACAGCCTACCGGTGCTCTCCCGGATGGATCTTCGATCTTCAGCTACAACGCTGACCTGCTGTCTCAGCCTGCCGTCTGGAAGGTGGGCAGGGAGGTGTGTCATCGCTTTGTGGTGAAGCGTCGATGGGTCTTTACTCTAGAGACCAATGGGTGTAAGGCCGGTACGCTGTTTACAAATACAGCCGGTACTATGGGGATACCTCCGTGCAACCGTTCCATATACTTCCACAAGTTCTGCAAGCGTCTCGGCGTAAGAACTGAGTGGAAGAATAGCTCTGGGGGTACCATAGGTGACATTAAAACGGGTGCGTTTGTATCTTGTGTTTGCACCTGGCAACGCCATGGGCCATAA |
|
Protein Sequence
|
MPSTSAPRRRRRNDDWAWDSATRRRVRPRTGYVPRGPRRNKLPSLQVDQDVYAAATAIDVNTHGADVSLLTNFLRGTSEDARHTNETILYKLSLDLYIMVDDVHQVYSGKSVCCCWLVYDAQPTGALPDGSSIFSYNADLLSQPAVWKVGREVCHRFVVKRRWVFTLETNGCKAGTLFTNTAGTMGIPPCNRSIYFHKFCKRLGVRTEWKNSSGGTIGDIKTGAFVSCVCTWQRHGP |
|
NCBI Accession
|
YP_009021763.1
|
|
Location
|
1297-1707,1782-2519 |
|
Protein Name
|
replication associated protein |
|
Coding Region
|
ATGAACAACACTGAGCATGGAGGGCCATCAGGATTCAGGTTTCAATCCAGAAACATATTCCTCACATATCCCAGGTGTAACCTGGCTCCGGAACTTATCGGTTCCTTCCTACTCAGCCTACTCTCACCTTACCATGTTATGTTTATCACTGTTACTAGCGAGCTTCATAAGGATGGGACTCCCCATATTCATGCTCTTGCTCAAACTGACAAACGTGTGCACACATATAGCCCTGGTTTTTTTGATGTACAAGGTTTTCATCCAAATATCCAGAGTGCTAGAAGTCCACAGACTGTACTGTCGTATATACTCAAATCTCCAACAGGAACATTCAATTACGGCTCCTTACGGCCCCGCGGAACACGCGCAGATGCTGCGTGTGGCATTGGAGAGGATACAGCTGGAGGAGGCGCTTCGTCAAGCTCTTCACCTCCCCAGGCCGATCAACGACGAGGATCACGATCCAGGGAGCTGGCCAACGACCCCGGAAGAGATAGAAAGGACGTCTTAATGACGTCAATTCTCGCGGGGTCCTCCAGTAAGCAGGAGTTCCTCAACGGGGTCAAGAAGGCATTCCCGTACGACTTCTGCGCAAGGCTGCAGAACTGGGAATACGCTGCCAACAAGCTCTTCGACACACCGGCGGTCTATCAACCTCCGTTTCCGGACTCCTATTTTCACTGTCATGAAAATATACATGATTGGGTCCGTGACAACATCTACGAGATAACTCCGGAGGCAAGACCCCTCTCCCTCTACATCTGTGGACCAACAAGGACAGGCAAATCAACATGGGCCCGAAGCCTGGGACGACACAACTACTGGCAAAATAATGTAGACTTCACGTCATATGACGTGGAAGCCAAATACAACGTGATAGACGACATCCCATTCAAGTACTGTCCTTGTTGGAAGGCGCTCATCGGCGGACAGAAGGACTTCACTGTCAACCCAAAATACGGAAAGAAGAAGCTAATAAAGGGGGGTATCCCCTCAATAGTCATCGTTAACGATGACGAAGACTGGATGCGCGCCATGACTGCGTCTCAGCGTTCGTACTTCGAACGCAACTGTGTAGTAGTATACCTCTATGAAGGGGATTCCTTCATAAAGGACGACGTCTCATCGACGTCGGAGGAATGTATCTAG |
|
Protein Sequence
|
MNNTEHGGPSGFRFQSRNIFLTYPRCNLAPELIGSFLLSLLSPYHVMFITVTSELHKDGTPHIHALAQTDKRVHTYSPGFFDVQGFHPNIQSARSPQTVLSYILKSPTGTFNYGSLRPRGTRADAACGIGEDTAGGGASSSSSPPQADQRRGSRSRELANDPGRDRKDVLMTSILAGSSSKQEFLNGVKKAFPYDFCARLQNWEYAANKLFDTPAVYQPPFPDSYFHCHENIHDWVRDNIYEITPEARPLSLYICGPTRTGKSTWARSLGRHNYWQNNVDFTSYDVEAKYNVIDDIPFKYCPCWKALIGGQKDFTVNPKYGKKKLIKGGIPSIVIVNDDEDWMRAMTASQRSYFERNCVVVYLYEGDSFIKDDVSSTSEECI |
|
NCBI Accession
|
YP_009021764.1
|
|
Location
|
1608-2519 |
|
Protein Name
|
RepA |
|
Coding Region
|
ATGAACAACACTGAGCATGGAGGGCCATCAGGATTCAGGTTTCAATCCAGAAACATATTCCTCACATATCCCAGGTGTAACCTGGCTCCGGAACTTATCGGTTCCTTCCTACTCAGCCTACTCTCACCTTACCATGTTATGTTTATCACTGTTACTAGCGAGCTTCATAAGGATGGGACTCCCCATATTCATGCTCTTGCTCAAACTGACAAACGTGTGCACACATATAGCCCTGGTTTTTTTGATGTACAAGGTTTTCATCCAAATATCCAGAGTGCTAGAAGTCCACAGACTGTACTGTCGTATATACTCAAATCTCCAACAGGAACATTCAATTACGGCTCCTTACGGCCCCGCGGAACACGCGCAGATGCTGCGTGTGGCATTGGAGAGGATACAGCTGGAGGAGGCGCTTCGTCAAGCTCTTCACCTCCCCAGGCCGATCAACGACGAGGATCACGATCCAGGGAGCTGGCCAACGACCCCGGAAGAGATAGAAAGGACGTCTTAATGACGTCAATTCTCGCGGGGTCCTCCAGTAAGCAGGAGTTCCTCAACGGGGTCAAGAAGGCATTCCCGTACGACTTCTGCGCAAGGCTGCAGAACTGGGAATACGCTGCCAACAAGCTCTTCGACACACCGGCGGTCTATCAACCTCCGTTTCCGGACTCCTATTTTCACTGTCATGAAAATATACATGATTGGGTCCGTGACAACATCTACGAGATAACTCCGGAGGTATATTCGTTGCTCCACCCATATGCTAACGCACAGGAGGATCTTCAATGGCTTCATAACACCGTTATGAACAGGCAAGACCCCTCTCCCTCTACATCTGTGGACCAACAAGGACAGGCAAATCAACATGGGCCCGAAGCCTGGGACGACACAACTACTGGCAAAATAATGTAG |
|
Protein Sequence
|
MNNTEHGGPSGFRFQSRNIFLTYPRCNLAPELIGSFLLSLLSPYHVMFITVTSELHKDGTPHIHALAQTDKRVHTYSPGFFDVQGFHPNIQSARSPQTVLSYILKSPTGTFNYGSLRPRGTRADAACGIGEDTAGGGASSSSSPPQADQRRGSRSRELANDPGRDRKDVLMTSILAGSSSKQEFLNGVKKAFPYDFCARLQNWEYAANKLFDTPAVYQPPFPDSYFHCHENIHDWVRDNIYEITPEVYSLLHPYANAQEDLQWLHNTVMNRQDPSPSTSVDQQGQANQHGPEAWDDTTTGKIM |