Melenis repens associated virus
Basic Information
Genomic Organization
JBrowse
Genome
GCAGCATCGCCTTTTGGGCCGAGGGGACATTCGTGCGCTCTGAATGGCCCCGAGGCGTCCGCATCAGGCTGGCTGGGCATGCTTTTGGTAGTGGGTTTCCGCGTAATTCGCTTGCAAAGCAAGCCAAAGTGGGTTATATAATTGTTGGCCTTTGTTTAAAGCCATCGATGGAGAAGGGTCCACTTCCGCAGGAATTTACAGTGGGGTCTAATCTCCCTCCCGCCGGGCCCTCAGGCGTCGGTAACGACGCTGCGTGGAGGTTCTTGGTTTTACTCTTCGCGTGTACTGCGGTTGCTGGTGTCTCGGTCTTCGCCTGCTGGAGGCTCTGCGGTAAGGATCTGCTCCTTACTCTGAAGGCAAAGCGTAGCAGGACCATCACGGAGCTAGGGTTCGGCCAGACTCCCGAAGGGAGGTACGCTGGAAGGGGTGCTCAACAGGTGGGCCAGGTCGGCGGGATCCCGGGGTAGCGTAGTACACTTCGGGGCCGGTCAGCGCCCCGTTTGGCCGGCGGCGTCGATGCCGGCGGCGAGGGGGAGCACCAGTAGAAAGAGGACTAGGGATGACTGGGCCTGGGACTCTCGCAAGAGGCGTCGTGTTCGGCCCACTACGTCTGCTATTCCGCGTGGGCCTCGTGGCCGTAGGCCCAGTTTGCAGGTGGATCAGGACGTATATGCAGGGCCCACTCTCGTTGAAGTTCCCGCCGTTGGCGGGATAGTTGGTATTATGACCAACTTCATGCGGGGGAGTGACGAGAGCGCGCGTCACACTGCAGAGACTATCCTGTACAAGATAGGGATCGATGTGTATGTGACTGTCTCGGAGGCCCTTACAGTATATTCAGGTAAGGGGGTCAATGTCGCTTGGCTGGTATACGATGCGCAGCCGACTGGCACGCGTCCTACGTGTGCCGATATCTTCCCGCTGGCGAGTCCGAATTTCAATACTCAGCCGTGTGTATGGAAAGTGGGAAGGGAGGTCTGCCATCGTTTTGTGGTTAAGAGGAGGTGGCTTTTCACTCTGGAGACCAATGGAGTTCGTCCTGGCACTTCGTTCTCGGGGGCGAACGGCGTTCCCCCATGTAATAGATCCCTGTACTTCCACAAGTTCTGCAAGCGATTGGGCGTCAGGACGGAGTGGAAGAACACCCCCGGAGGGACAGATGGGGACATCAAGACGGGTGCCTTGTATCTAGTATTCGCTGCGGGCAATAAGATGTCCTTCAGCGTTAGCGGGGTATGCAGGAAGTACTTCAAGAGTGTCGGGAACCAGTAGTTTGTAATTCGGAAGAATTAATAAAAGCCGTCAGGCATTTTATTCATATTGATGATGTTTACAATGGCGTAAGCTCAAACTCAAATTACACACAAATACAAACATATGGCGGACAGGACAAAGCAGGCGGCTATAGGGCGCGCAAGGGGAAGTCCTCAACACAACACCCCGGACATACTATACAAACACTACGCCGCAGTATGCGGCGCTTCGGCTATGAAGGAATCTCCTTCATAGAGCCTGAATATTGTGCAGTTGCTCTCCAGGTAGGAGAGCTGTTCCGGCCTCATCGCCTGCAGCCAGTCCTCGTCCTCGTTAGCGAGGACTATTGTAGGTATTCCGCCCTTTATGAGCTTCTTCTTACCATATTTGGGGTTGACAGTGTAGTCTCTCTGGGCCCCGATGAGAGCCTTCCAACAAGGACAGTACTTGAATGGTATGTCATCCACTATGTTGTATTGGGCTTCAGCGTCATATAAGCTGAAGTCTACATTATTTTGCCAATAGTTATGGCGTCCTAAGCTTCGGGCCCATGTTGTCTTCCCTGTCCTTGTTGGGCCGCAGATGTAGAGGGAGCTCGGTCGCACCTGCTTTCAAAGCATGTGTCATGGAGCCATCTAAGTTCAGCTTCAGCGTCCGCGTGAGGGTGAAGAAGTTGGTATACCTCCGGAGTGACCTGGTAGACATTATCACGGACCCAATCGGACAGTGTTTCGTGGCAGCGAAACAAGGAGTCCGGAAATGGAGGTTCGTATGCCGAAGGTGGATCGGGGTAGAGCTTCTGAGCAGCGTACTCCCAGGCTTGAAGCCGGACGCAGAAGTCGTACGGGAAGCACTTCTTGACCTCATTGAGGTACTCCTGCCTGGAGGAGCACCGCCGGAGGATGGACGCCATCACCTCGTCCTTCAAGGGCTGTCGGGGAGCTCGTCTGTGTCGTATAGGCCCGGATCCTCCTGATCCAGGTTCACTATCGGCGGCAGGTCGAGAATTGTTTGAAGATCCTGCATCAGCTTGAACCGCTCCCTCTGCACGTGCAGTAGGTGCGCGTGCTCCGCGGGCCCGGAAGGTACCCCAACGGAATTCTCCCAAAGAGTATTTAGATATATAAGCCAGCACAGCTTTGCAGTTTCGAGTACCTTGTATGTTAGGGTGAAAACCCAGAATATCAAAGAAGCCTGTATCAGATGTATAGATACGTTGATTAGTCTGAGCCAGGGCGTGGATGTGTGGAGTCCCATCTTGATGGAGCTCGCGATTAACAGCGACGAAACTAACAGCGTAAGCTGAAAGGAGGTTTTTGAGATTGCTTCCCACAACCTCAGGCTCCAGTGGGCATCTGGAGTATGTGAGGAAGACATTTGAATTTTGGAAGTAGAATCGGCTAGACTCTCCTGGCTCAGTGTTCATCAGGAGAGCGGTTCAGCTCTCCAACACTTAGCCGCAGAATCGAGGGGCAAAAACTCTCTAGCCTAAACCCTCTTGCCTCTGCGCGCCGCGAATGAGTATTACGGGCCGGGCCGGTATTTATCGGCAGGCCGGCCGAGGTCCAAAAGGCGATGCGCGCGGAGGATAACATT
Gene Information
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NCBI Accession
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QDO73336.1
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Location
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168-467 |
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Protein Name
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movement protein |
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Coding Region
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ATGGAGAAGGGTCCACTTCCGCAGGAATTTACAGTGGGGTCTAATCTCCCTCCCGCCGGGCCCTCAGGCGTCGGTAACGACGCTGCGTGGAGGTTCTTGGTTTTACTCTTCGCGTGTACTGCGGTTGCTGGTGTCTCGGTCTTCGCCTGCTGGAGGCTCTGCGGTAAGGATCTGCTCCTTACTCTGAAGGCAAAGCGTAGCAGGACCATCACGGAGCTAGGGTTCGGCCAGACTCCCGAAGGGAGGTACGCTGGAAGGGGTGCTCAACAGGTGGGCCAGGTCGGCGGGATCCCGGGGTAG |
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Protein Sequence
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MEKGPLPQEFTVGSNLPPAGPSGVGNDAAWRFLVLLFACTAVAGVSVFACWRLCGKDLLLTLKAKRSRTITELGFGQTPEGRYAGRGAQQVGQVGGIPG |
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NCBI Accession
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QDO73337.1
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Location
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517-1272 |
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Protein Name
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coat protein |
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Coding Region
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ATGCCGGCGGCGAGGGGGAGCACCAGTAGAAAGAGGACTAGGGATGACTGGGCCTGGGACTCTCGCAAGAGGCGTCGTGTTCGGCCCACTACGTCTGCTATTCCGCGTGGGCCTCGTGGCCGTAGGCCCAGTTTGCAGGTGGATCAGGACGTATATGCAGGGCCCACTCTCGTTGAAGTTCCCGCCGTTGGCGGGATAGTTGGTATTATGACCAACTTCATGCGGGGGAGTGACGAGAGCGCGCGTCACACTGCAGAGACTATCCTGTACAAGATAGGGATCGATGTGTATGTGACTGTCTCGGAGGCCCTTACAGTATATTCAGGTAAGGGGGTCAATGTCGCTTGGCTGGTATACGATGCGCAGCCGACTGGCACGCGTCCTACGTGTGCCGATATCTTCCCGCTGGCGAGTCCGAATTTCAATACTCAGCCGTGTGTATGGAAAGTGGGAAGGGAGGTCTGCCATCGTTTTGTGGTTAAGAGGAGGTGGCTTTTCACTCTGGAGACCAATGGAGTTCGTCCTGGCACTTCGTTCTCGGGGGCGAACGGCGTTCCCCCATGTAATAGATCCCTGTACTTCCACAAGTTCTGCAAGCGATTGGGCGTCAGGACGGAGTGGAAGAACACCCCCGGAGGGACAGATGGGGACATCAAGACGGGTGCCTTGTATCTAGTATTCGCTGCGGGCAATAAGATGTCCTTCAGCGTTAGCGGGGTATGCAGGAAGTACTTCAAGAGTGTCGGGAACCAGTAG |
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Protein Sequence
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MPAARGSTSRKRTRDDWAWDSRKRRRVRPTTSAIPRGPRGRRPSLQVDQDVYAGPTLVEVPAVGGIVGIMTNFMRGSDESARHTAETILYKIGIDVYVTVSEALTVYSGKGVNVAWLVYDAQPTGTRPTCADIFPLASPNFNTQPCVWKVGREVCHRFVVKRRWLFTLETNGVRPGTSFSGANGVPPCNRSLYFHKFCKRLGVRTEWKNTPGGTDGDIKTGALYLVFAAGNKMSFSVSGVCRKYFKSVGNQ |
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NCBI Accession
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QDO73338.1
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Location
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1790-2680 |
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Protein Name
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RepA |
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Coding Region
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ATGAACACTGAGCCAGGAGAGTCTAGCCGATTCTACTTCCAAAATTCAAATGTCTTCCTCACATACTCCAGATGCCCACTGGAGCCTGAGGTTGTGGGAAGCAATCTCAAAAACCTCCTTTCAGCTTACGCTGTTAGTTTCGTCGCTGTTAATCGCGAGCTCCATCAAGATGGGACTCCACACATCCACGCCCTGGCTCAGACTAATCAACGTATCTATACATCTGATACAGGCTTCTTTGATATTCTGGGTTTTCACCCTAACATACAAGGTACTCGAAACTGCAAAGCTGTGCTGGCTTATATATCTAAATACTCTTTGGGAGAATTCCGTTGGGGTACCTTCCGGGCCCGCGGAGCACGCGCACCTACTGCACGTGCAGAGGGAGCGGTTCAAGCTGATGCAGGATCTTCAAACAATTCTCGACCTGCCGCCGATAGTGAACCTGGATCAGGAGGATCCGGGCCTATACGACACAGACGAGCTCCCCGACAGCCCTTGAAGGACGAGGTGATGGCGTCCATCCTCCGGCGGTGCTCCTCCAGGCAGGAGTACCTCAATGAGGTCAAGAAGTGCTTCCCGTACGACTTCTGCGTCCGGCTTCAAGCCTGGGAGTACGCTGCTCAGAAGCTCTACCCCGATCCACCTTCGGCATACGAACCTCCATTTCCGGACTCCTTGTTTCGCTGCCACGAAACACTGTCCGATTGGGTCCGTGATAATGTCTACCAGGTCACTCCGGAGGTATACCAACTTCTTCACCCTCACGCGGACGCTGAAGCTGAACTTAGATGGCTCCATGACACATGCTTTGAAAGCAGGTGCGACCGAGCTCCCTCTACATCTGCGGCCCAACAAGGACAGGGAAGACAACATGGGCCCGAAGCTTAG |
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Protein Sequence
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MNTEPGESSRFYFQNSNVFLTYSRCPLEPEVVGSNLKNLLSAYAVSFVAVNRELHQDGTPHIHALAQTNQRIYTSDTGFFDILGFHPNIQGTRNCKAVLAYISKYSLGEFRWGTFRARGARAPTARAEGAVQADAGSSNNSRPAADSEPGSGGSGPIRHRRAPRQPLKDEVMASILRRCSSRQEYLNEVKKCFPYDFCVRLQAWEYAAQKLYPDPPSAYEPPFPDSLFRCHETLSDWVRDNVYQVTPEVYQLLHPHADAEAELRWLHDTCFESRCDRAPSTSAAQQGQGRQHGPEA |