Melenis repens associated virus

Basic Information

Genus Maldovirus
Isolate Reunion
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

MK546380
GCAGCATCGCCTTTTGGGCCGAGGGGACATTCGTGCGCTCTGAATGGCCCCGAGGCGTCCGCATCAGGCTGGCTGGGCATGCTTTTGGTAGTGGGTTTCCGCGTAATTCGCTTGCAAAGCAAGCCAAAGTGGGTTATATAATTGTTGGCCTTTGTTTAAAGCCATCGATGGAGAAGGGTCCACTTCCGCAGGAATTTACAGTGGGGTCTAATCTCCCTCCCGCCGGGCCCTCAGGCGTCGGTAACGACGCTGCGTGGAGGTTCTTGGTTTTACTCTTCGCGTGTACTGCGGTTGCTGGTGTCTCGGTCTTCGCCTGCTGGAGGCTCTGCGGTAAGGATCTGCTCCTTACTCTGAAGGCAAAGCGTAGCAGGACCATCACGGAGCTAGGGTTCGGCCAGACTCCCGAAGGGAGGTACGCTGGAAGGGGTGCTCAACAGGTGGGCCAGGTCGGCGGGATCCCGGGGTAGCGTAGTACACTTCGGGGCCGGTCAGCGCCCCGTTTGGCCGGCGGCGTCGATGCCGGCGGCGAGGGGGAGCACCAGTAGAAAGAGGACTAGGGATGACTGGGCCTGGGACTCTCGCAAGAGGCGTCGTGTTCGGCCCACTACGTCTGCTATTCCGCGTGGGCCTCGTGGCCGTAGGCCCAGTTTGCAGGTGGATCAGGACGTATATGCAGGGCCCACTCTCGTTGAAGTTCCCGCCGTTGGCGGGATAGTTGGTATTATGACCAACTTCATGCGGGGGAGTGACGAGAGCGCGCGTCACACTGCAGAGACTATCCTGTACAAGATAGGGATCGATGTGTATGTGACTGTCTCGGAGGCCCTTACAGTATATTCAGGTAAGGGGGTCAATGTCGCTTGGCTGGTATACGATGCGCAGCCGACTGGCACGCGTCCTACGTGTGCCGATATCTTCCCGCTGGCGAGTCCGAATTTCAATACTCAGCCGTGTGTATGGAAAGTGGGAAGGGAGGTCTGCCATCGTTTTGTGGTTAAGAGGAGGTGGCTTTTCACTCTGGAGACCAATGGAGTTCGTCCTGGCACTTCGTTCTCGGGGGCGAACGGCGTTCCCCCATGTAATAGATCCCTGTACTTCCACAAGTTCTGCAAGCGATTGGGCGTCAGGACGGAGTGGAAGAACACCCCCGGAGGGACAGATGGGGACATCAAGACGGGTGCCTTGTATCTAGTATTCGCTGCGGGCAATAAGATGTCCTTCAGCGTTAGCGGGGTATGCAGGAAGTACTTCAAGAGTGTCGGGAACCAGTAGTTTGTAATTCGGAAGAATTAATAAAAGCCGTCAGGCATTTTATTCATATTGATGATGTTTACAATGGCGTAAGCTCAAACTCAAATTACACACAAATACAAACATATGGCGGACAGGACAAAGCAGGCGGCTATAGGGCGCGCAAGGGGAAGTCCTCAACACAACACCCCGGACATACTATACAAACACTACGCCGCAGTATGCGGCGCTTCGGCTATGAAGGAATCTCCTTCATAGAGCCTGAATATTGTGCAGTTGCTCTCCAGGTAGGAGAGCTGTTCCGGCCTCATCGCCTGCAGCCAGTCCTCGTCCTCGTTAGCGAGGACTATTGTAGGTATTCCGCCCTTTATGAGCTTCTTCTTACCATATTTGGGGTTGACAGTGTAGTCTCTCTGGGCCCCGATGAGAGCCTTCCAACAAGGACAGTACTTGAATGGTATGTCATCCACTATGTTGTATTGGGCTTCAGCGTCATATAAGCTGAAGTCTACATTATTTTGCCAATAGTTATGGCGTCCTAAGCTTCGGGCCCATGTTGTCTTCCCTGTCCTTGTTGGGCCGCAGATGTAGAGGGAGCTCGGTCGCACCTGCTTTCAAAGCATGTGTCATGGAGCCATCTAAGTTCAGCTTCAGCGTCCGCGTGAGGGTGAAGAAGTTGGTATACCTCCGGAGTGACCTGGTAGACATTATCACGGACCCAATCGGACAGTGTTTCGTGGCAGCGAAACAAGGAGTCCGGAAATGGAGGTTCGTATGCCGAAGGTGGATCGGGGTAGAGCTTCTGAGCAGCGTACTCCCAGGCTTGAAGCCGGACGCAGAAGTCGTACGGGAAGCACTTCTTGACCTCATTGAGGTACTCCTGCCTGGAGGAGCACCGCCGGAGGATGGACGCCATCACCTCGTCCTTCAAGGGCTGTCGGGGAGCTCGTCTGTGTCGTATAGGCCCGGATCCTCCTGATCCAGGTTCACTATCGGCGGCAGGTCGAGAATTGTTTGAAGATCCTGCATCAGCTTGAACCGCTCCCTCTGCACGTGCAGTAGGTGCGCGTGCTCCGCGGGCCCGGAAGGTACCCCAACGGAATTCTCCCAAAGAGTATTTAGATATATAAGCCAGCACAGCTTTGCAGTTTCGAGTACCTTGTATGTTAGGGTGAAAACCCAGAATATCAAAGAAGCCTGTATCAGATGTATAGATACGTTGATTAGTCTGAGCCAGGGCGTGGATGTGTGGAGTCCCATCTTGATGGAGCTCGCGATTAACAGCGACGAAACTAACAGCGTAAGCTGAAAGGAGGTTTTTGAGATTGCTTCCCACAACCTCAGGCTCCAGTGGGCATCTGGAGTATGTGAGGAAGACATTTGAATTTTGGAAGTAGAATCGGCTAGACTCTCCTGGCTCAGTGTTCATCAGGAGAGCGGTTCAGCTCTCCAACACTTAGCCGCAGAATCGAGGGGCAAAAACTCTCTAGCCTAAACCCTCTTGCCTCTGCGCGCCGCGAATGAGTATTACGGGCCGGGCCGGTATTTATCGGCAGGCCGGCCGAGGTCCAAAAGGCGATGCGCGCGGAGGATAACATT

Gene Information

NCBI Accession QDO73336.1
Location 168-467
Protein Name movement protein
Coding Region ATGGAGAAGGGTCCACTTCCGCAGGAATTTACAGTGGGGTCTAATCTCCCTCCCGCCGGGCCCTCAGGCGTCGGTAACGACGCTGCGTGGAGGTTCTTGGTTTTACTCTTCGCGTGTACTGCGGTTGCTGGTGTCTCGGTCTTCGCCTGCTGGAGGCTCTGCGGTAAGGATCTGCTCCTTACTCTGAAGGCAAAGCGTAGCAGGACCATCACGGAGCTAGGGTTCGGCCAGACTCCCGAAGGGAGGTACGCTGGAAGGGGTGCTCAACAGGTGGGCCAGGTCGGCGGGATCCCGGGGTAG
Protein Sequence MEKGPLPQEFTVGSNLPPAGPSGVGNDAAWRFLVLLFACTAVAGVSVFACWRLCGKDLLLTLKAKRSRTITELGFGQTPEGRYAGRGAQQVGQVGGIPG

NCBI Accession QDO73337.1
Location 517-1272
Protein Name coat protein
Coding Region ATGCCGGCGGCGAGGGGGAGCACCAGTAGAAAGAGGACTAGGGATGACTGGGCCTGGGACTCTCGCAAGAGGCGTCGTGTTCGGCCCACTACGTCTGCTATTCCGCGTGGGCCTCGTGGCCGTAGGCCCAGTTTGCAGGTGGATCAGGACGTATATGCAGGGCCCACTCTCGTTGAAGTTCCCGCCGTTGGCGGGATAGTTGGTATTATGACCAACTTCATGCGGGGGAGTGACGAGAGCGCGCGTCACACTGCAGAGACTATCCTGTACAAGATAGGGATCGATGTGTATGTGACTGTCTCGGAGGCCCTTACAGTATATTCAGGTAAGGGGGTCAATGTCGCTTGGCTGGTATACGATGCGCAGCCGACTGGCACGCGTCCTACGTGTGCCGATATCTTCCCGCTGGCGAGTCCGAATTTCAATACTCAGCCGTGTGTATGGAAAGTGGGAAGGGAGGTCTGCCATCGTTTTGTGGTTAAGAGGAGGTGGCTTTTCACTCTGGAGACCAATGGAGTTCGTCCTGGCACTTCGTTCTCGGGGGCGAACGGCGTTCCCCCATGTAATAGATCCCTGTACTTCCACAAGTTCTGCAAGCGATTGGGCGTCAGGACGGAGTGGAAGAACACCCCCGGAGGGACAGATGGGGACATCAAGACGGGTGCCTTGTATCTAGTATTCGCTGCGGGCAATAAGATGTCCTTCAGCGTTAGCGGGGTATGCAGGAAGTACTTCAAGAGTGTCGGGAACCAGTAG
Protein Sequence MPAARGSTSRKRTRDDWAWDSRKRRRVRPTTSAIPRGPRGRRPSLQVDQDVYAGPTLVEVPAVGGIVGIMTNFMRGSDESARHTAETILYKIGIDVYVTVSEALTVYSGKGVNVAWLVYDAQPTGTRPTCADIFPLASPNFNTQPCVWKVGREVCHRFVVKRRWLFTLETNGVRPGTSFSGANGVPPCNRSLYFHKFCKRLGVRTEWKNTPGGTDGDIKTGALYLVFAAGNKMSFSVSGVCRKYFKSVGNQ

NCBI Accession QDO73338.1
Location 1790-2680
Protein Name RepA
Coding Region ATGAACACTGAGCCAGGAGAGTCTAGCCGATTCTACTTCCAAAATTCAAATGTCTTCCTCACATACTCCAGATGCCCACTGGAGCCTGAGGTTGTGGGAAGCAATCTCAAAAACCTCCTTTCAGCTTACGCTGTTAGTTTCGTCGCTGTTAATCGCGAGCTCCATCAAGATGGGACTCCACACATCCACGCCCTGGCTCAGACTAATCAACGTATCTATACATCTGATACAGGCTTCTTTGATATTCTGGGTTTTCACCCTAACATACAAGGTACTCGAAACTGCAAAGCTGTGCTGGCTTATATATCTAAATACTCTTTGGGAGAATTCCGTTGGGGTACCTTCCGGGCCCGCGGAGCACGCGCACCTACTGCACGTGCAGAGGGAGCGGTTCAAGCTGATGCAGGATCTTCAAACAATTCTCGACCTGCCGCCGATAGTGAACCTGGATCAGGAGGATCCGGGCCTATACGACACAGACGAGCTCCCCGACAGCCCTTGAAGGACGAGGTGATGGCGTCCATCCTCCGGCGGTGCTCCTCCAGGCAGGAGTACCTCAATGAGGTCAAGAAGTGCTTCCCGTACGACTTCTGCGTCCGGCTTCAAGCCTGGGAGTACGCTGCTCAGAAGCTCTACCCCGATCCACCTTCGGCATACGAACCTCCATTTCCGGACTCCTTGTTTCGCTGCCACGAAACACTGTCCGATTGGGTCCGTGATAATGTCTACCAGGTCACTCCGGAGGTATACCAACTTCTTCACCCTCACGCGGACGCTGAAGCTGAACTTAGATGGCTCCATGACACATGCTTTGAAAGCAGGTGCGACCGAGCTCCCTCTACATCTGCGGCCCAACAAGGACAGGGAAGACAACATGGGCCCGAAGCTTAG
Protein Sequence MNTEPGESSRFYFQNSNVFLTYSRCPLEPEVVGSNLKNLLSAYAVSFVAVNRELHQDGTPHIHALAQTNQRIYTSDTGFFDILGFHPNIQGTRNCKAVLAYISKYSLGEFRWGTFRARGARAPTARAEGAVQADAGSSNNSRPAADSEPGSGGSGPIRHRRAPRQPLKDEVMASILRRCSSRQEYLNEVKKCFPYDFCVRLQAWEYAAQKLYPDPPSAYEPPFPDSLFRCHETLSDWVRDNVYQVTPEVYQLLHPHADAEAELRWLHDTCFESRCDRAPSTSAAQQGQGRQHGPEA

References More References in PubMed

1

Retention and Transmission of Grapevine Leafroll-Associated Virus 3 by Pseudococcus calceolariae.

McGreal B, et al.  Front Microbiol. 2021 May 12;12:663948. doi: 10.3389/fmicb.2021.663948. eCollection 2021.

PMID: 34054767
2

Genomic characterization of a novel potyvirus infecting Barleria repens in South Africa.

Read DA, et al.  Arch Virol. 2022 Dec 28;168(1):10. doi: 10.1007/s00705-022-05662-w.

PMID: 36576587
3

First report of Soybean dwarf virus infecting white clover (Trifolium repens) in Finland.

Luoto A, et al.  Plant Dis. 2021 Jun 15. doi: 10.1094/PDIS-04-21-0822-PDN. Online ahead of print.

PMID: 34129350
4

First Report of Alfalfa mosaic virus Associated with Severe Mosaic and Mottling of Pepper (Capsicum annuum) and White Clover (Trifolium repens) in Oklahoma.

Abdalla OA, et al.  Plant Dis. 2012 Nov;96(11):1705. doi: 10.1094/PDIS-07-12-0630-PDN.

PMID: 30727477
5

Co-infection patterns and geographic distribution of a complex pathosystem targeted by pathogen-resistant plants.

Biddle JM, et al.  Ecol Appl. 2012 Jan;22(1):35-52. doi: 10.1890/11-0341.1.

PMID: 22471074
6

Identification, molecular and biological characterization of two novel secovirids in wild grass species in Belgium.

Maclot FJ, et al.  Virus Res. 2021 Jun;298:198397. doi: 10.1016/j.virusres.2021.198397. Epub 2021 Mar 18.

PMID: 33744338
7

The potential of plant viruses to promote genotypic diversity via genotype x environment interactions.

van Mölken T, et al.  Ann Bot. 2011 Jun;107(8):1391-7. doi: 10.1093/aob/mcr078. Epub 2011 Apr 22.

PMID: 21515605
8

Association of phytoplasmas and viruses with malformed clovers.

Fránová J, et al.  Folia Microbiol (Praha). 2004;49(5):617-24. doi: 10.1007/BF02931544.

PMID: 15702556
9

The risk of vector-borne infections in sled dogs associated with existing and new endemic areas in Poland: Part 1: A population study on sled dogs during the racing season.

Bajer A, et al.  Vet Parasitol. 2014 May 28;202(3-4):276-86. doi: 10.1016/j.vetpar.2013.12.033. Epub 2014 Jan 20.

PMID: 24491396
10

Attributes of bean yellow mosaic potyvirus transmission from clover to snap beans by four species of aphids (Homoptera: Aphididae).

Hampton RO, et al.  J Econ Entomol. 2005 Dec;98(6):1816-23. doi: 10.1603/0022-0493-98.6.1816.

PMID: 16539099