Tomato leaf curl Karnataka betasatellite

Basic Information

Abbreviation ToLCuKaB
Genebank Accession MG758146
Isolate IN-Chr-17
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGATTTTTTTGGCGTTCCAGGTGGGTCCCACAATATCCAAAGGAAGAAAAATGGACCGGGGCAATGCAATTGGGCCTGAAAAGTAATGGGCTTGGACCAGTAGATTCGAGACTGGGCCAATATAATAAAATAAGAAATGGGCTCATAATCAAAACAAAGTCTTTATTGATTTCTAATACATTATACATTCACACATACACATTTGTATATACATCATATTCATCCCCTATACGTATATCAACTAATGGGGCCTCCTGCATAATCATTATATCAATAGCCTCTACCATGTCCTCCTGTCGAAAATCCCCAATATTGGAATCCCTGTACATGATCTTCAATATATTTTGTATCCCTTCCTCCAAATTGTTGAAATCAAAAGGTGGTATGATCCCATTATGTCCGTATGGGATCATGAAGGTCTTCTTTGCTAGGGCTGGTGTTCTTGTTGAGCACAAGTCAATTTGGACAAGAATTGAATTGTCCTCGCTGATCTTCACGTTGATGGTAAATACCATCCCCTTCTCGTTATCATACGTGATCGTCATTTGAAAGTAATTATGAACGACACATGAGTTTAGTTGTCTTAATAGTGGCCATATATCTGGATATATGGACAGAATTCATATACGTGGTTCATGATTCTCATATGAATTGATTCTCATATGAATGTCAGTGGAGTTACACAAGGTTGATAGTTACATGACTATCAATCATTGTCAATAACAAGGAAAAAAAGAAAAATTTAATCATGAAAGGATTAATTTTTGAAGAATAAAAGGGGAAGAAAATAAAAAAGAAAACCACGACAAAAATAATGGCGCGGGAAAAAATAAAAAAAAAAACGAAAAGGGAAGACAAACACTTGAGCTCAGACAGAAACCCCTTGAGAAACAATGGAAGCGCACCGGCAACACCCCGGAAAAAACAAAACAAGGGAGACACATGAGCAAAAAACAGAAAACTGAAAACTAAACTAAGAGGGTTGTACATGAAATAATAGAAAGTCCGTACACAGTAATTAATCTTTAATTACTGCTCTGTAAATCTCAATAAAATTAACCCAGGGGTTAATTTTGTTGTCTCCAATAGGTCAAATGTCCCCAATTGAGGCACCAATATATTGGTGGCTCGGAGAGAGAAATAATATCCGGATCCCGAATATACCCCTACATATGTGTCTGGAAGGCGCGTGGTAATGCGCTGAAAAAGGTGACCTTCTCTCTCCTAAAACTCACCGGAACCTCCAAACTGGCTGATTCCGGTGTCTATTTTCGACACGCGCAGCGGTGTGTACCCCTGGGAGGGTCTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCCTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession AYN61547.1
Location 201-557
Protein Name C1
Coding Region ATGACGATCACGTATGATAACGAGAAGGGGATGGTATTTACCATCAACGTGAAGATCAGCGAGGACAATTCAATTCTTGTCCAAATTGACTTGTGCTCAACAAGAACACCAGCCCTAGCAAAGAAGACCTTCATGATCCCATACGGACATAATGGGATCATACCACCTTTTGATTTCAACAATTTGGAGGAAGGGATACAAAATATATTGAAGATCATGTACAGGGATTCCAATATTGGGGATTTTCGACAGGAGGACATGGTAGAGGCTATTGATATAATGATTATGCAGGAGGCCCCATTAGTTGATATACGTATAGGGGATGAATATGATGTATATACAAATGTGTATGTGTGA
Protein Sequence MTITYDNEKGMVFTINVKISEDNSILVQIDLCSTRTPALAKKTFMIPYGHNGIIPPFDFNNLEEGIQNILKIMYRDSNIGDFRQEDMVEAIDIMIMQEAPLVDIRIGDEYDVYTNVYV

References More References in PubMed

1

Molecular analysis, infectivity and host range of Tomato leaf curl Karnataka virus associated with Corchorus yellow vein mosaic betasatellite.

Dokka N, et al.  Virus Res. 2021 Oct 2;303:198521. doi: 10.1016/j.virusres.2021.198521. Epub 2021 Jul 24.

PMID: 34314770
2

Transreplication Preference of the Tomato Leaf Curl Joydebpur Virus for a Noncognate Betasatellite through Iteron Resemblance on Nicotiana bethamiana.

Vo TTB, et al.  Microorganisms. 2023 Dec 1;11(12):2907. doi: 10.3390/microorganisms11122907.

PMID: 38138051
3

A New Begomovirus Species in Association with Betasatellite Causing Tomato Leaf Curl Disease in Gandhinagar, India.

Rathore S, et al.  Plant Dis. 2014 Mar;98(3):428. doi: 10.1094/PDIS-07-13-0719-PDN.

PMID: 30708408
4

Cotton leaf curl Multan betasatellite as a plant gene delivery vector trans-activated by taxonomically diverse geminiviruses.

Kharazmi S, et al.  Arch Virol. 2012 Jul;157(7):1269-79. doi: 10.1007/s00705-012-1290-2. Epub 2012 Apr 5.

PMID: 22476203
5

Association of Tomato Leaf Curl New Delhi Virus, Betasatellite, and Alphasatellite with Mosaic Disease of Spine Gourd (Momordica dioica Roxb. Willd) in India.

Venkataravanappa V, et al.  Iran J Biotechnol. 2019 Jan 11;17(1):e2134. doi: 10.21859/ijb.2134. eCollection 2019 Jan.

PMID: 31457044
6

Characterization of Tomato leaf curl New Delhi virus associated with leaf curl and yellowing disease of Watermelon and development of LAMP assay for its detection.

Venkataravanappa V, et al.  3 Biotech. 2020 Jun;10(6):282. doi: 10.1007/s13205-020-02245-x. Epub 2020 Jun 2.

PMID: 32550101
7

Molecular characterization of begomovirus and DNA satellites associated with mosaic and leaf curl disease of Jamaica cherry (Muntingia calabura) in India: Uncovering a new host for chilli leaf curl India virus.

Prasad KSUD, et al.  Virusdisease. 2024 Sep;35(3):484-495. doi: 10.1007/s13337-024-00891-w. Epub 2024 Sep 16.

PMID: 39464737
8

Diversity and phylogeography of begomoviruses and DNA satellites associated with the leaf curl and mosaic disease complex of eggplant.

Venkataravanappa V, et al.  Microb Pathog. 2023 Jul;180:106127. doi: 10.1016/j.micpath.2023.106127. Epub 2023 Apr 28.

PMID: 37119939
9

Molecular characterization of novel bipartite begomovirus associated with enation leaf disease of Garden croton (Codiaeum variegatum L.).

Venkataravanappa V, et al.  Virusdisease. 2022 Jun;33(2):194-207. doi: 10.1007/s13337-022-00772-0. Epub 2022 Jul 1.

PMID: 35991698
10

A Geminivirus-Satellite Complex is Associated with Leaf Deformity of Mentha (Mint) Plants in Punjab.

Borah BK, et al.  Indian J Virol. 2010 Oct;21(2):103-9. doi: 10.1007/s13337-010-0018-8. Epub 2011 Jan 11.

PMID: 23637488