Tomato leaf curl Joydebpur betasatellite

Basic Information

Abbreviation ToLCJoB
Genebank Accession AJ966244
Isolate BD-Gaz-05
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGGGGTCTTTGGCGTCCGAGGTGGGTCCCACTGTATCCAAAAGAAGAAATATGGATTTGGGCAATGCAATTGGGCCTTAATTTTATGGGCTTCTATTATTGGGCTATGATATTGGACTCCAAGAATATATGAAACATAATATCTTATTAATACGTCATACAAATACAATTTGTACATATATCATATATGTACATTTACATCCATATCGTATTCCTCTATTACGTTTATGTTTACTACTGGAGCCTCGTTCATCATTAGGATATCAATACACTCAACCATGTCCTCACGCCGGAACTCCTTGATGGTCGAGTCTTTGTACATGATCTTTAGTAGGTTACATATTCCTTCCTCGATGTTGTTGAAGTCAAATGGACCTATGAACCCTTGATGGCCGTATGGGATCCTGAATTTGGCTTTGGCTAGTGCTGGTGACCGTGTGGATGTCAAATCCACATGAACCATGATGGAATCGTCGTTCGTCAACTTCACATTCACAGTGAATTCCATGCCATTCTTATTATCATACTTGATCGTCATAATGAATTCTGTGAGGTGAAACATGAGTGCCTCTCATTATATAGGAGTCGTATATCTTGATATATGAACCTAATTCAATTACGTGTGCTGCTCTAAATCACATATAATACGTGGTTAAGTGATGTTTGATAGTGACAACACTATCAAATATTCAAAAAGAAAAAGAAAACAAAATCATAATTATAAAATAATTATGAGGAAGAAAAAAAGGAAAATAAAAACAACTGAATGAAACATGAGTTTCAGTCAGATAAACAAATCAAAAAACAAACACTAAACACAACCTAAACACACACACACACAAACACAAACCCTATGAAAAGAAAAGGGAGCGCAGCGACGAAACAACCAAGAACTGACAACAACAATCACAGACGTGTGAAGAAAAAAAAAGAAAGAAAAGAAAAAAATGAATGATTGGACTCTACAATCATGAATATTCAAGTCCGTACACATGAGTTATTTACTGTTTTACCGCACGGTAAAATAGTAAATGATATTTACCCCGGGGTAAATATCTGAGACCCCAATAGGTAAATGAGACCCCAATTGAGGCACCGATATATTGGGGGCTCGGAAAGAGAAATAAATCCCGCGTTCCAAAAATGCCCCTAATTCTGTGTCTGCATGGCGCGTGGGAGTGCGCCTAAAAAGGTGACCTTCTCTCTCCAAAAACTCACCGGAACCACCAAACTGGCTGATTCCGGTGTCAATTTTCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCCTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession CAI84641.1
Location 193-573
Gene Name aC1
Protein Name aC1 protein
Coding Region ATGTTTCACCTCACAGAATTCATTATGACGATCAAGTATGATAATAAGAATGGCATGGAATTCACTGTGAATGTGAAGTTGACGAACGACGATTCCATCATGGTTCATGTGGATTTGACATCCACACGGTCACCAGCACTAGCCAAAGCCAAATTCAGGATCCCATACGGCCATCAAGGGTTCATAGGTCCATTTGACTTCAACAACATCGAGGAAGGAATATGTAACCTACTAAAGATCATGTACAAAGACTCGACCATCAAGGAGTTCCGGCGTGAGGACATGGTTGAGTGTATTGATATCCTAATGATGAACGAGGCTCCAGTAGTAAACATAAACGTAATAGAGGAATACGATATGGATGTAAATGTACATATATGA
Protein Sequence MFHLTEFIMTIKYDNKNGMEFTVNVKLTNDDSIMVHVDLTSTRSPALAKAKFRIPYGHQGFIGPFDFNNIEEGICNLLKIMYKDSTIKEFRREDMVECIDILMMNEAPVVNINVIEEYDMDVNVHI

References More References in PubMed

1

Transreplication Preference of the Tomato Leaf Curl Joydebpur Virus for a Noncognate Betasatellite through Iteron Resemblance on Nicotiana bethamiana.

Vo TTB, et al.  Microorganisms. 2023 Dec 1;11(12):2907. doi: 10.3390/microorganisms11122907.

PMID: 38138051
2

Tomato leaf curl Joydebpur virus: a monopartite begomovirus causing severe leaf curl in tomato in West Bengal.

Tiwari N, et al.  Arch Virol. 2013 Jan;158(1):1-10. doi: 10.1007/s00705-012-1440-6. Epub 2012 Aug 24.

PMID: 22918555
3

A New Begomovirus Species Causing Tomato Leaf Curl Disease in Patna, India.

Kumari P, et al.  Plant Dis. 2009 May;93(5):545. doi: 10.1094/PDIS-93-5-0545B.

PMID: 30764166
4

Molecular characterization of a new species of Begomovirus and betasatellite causing leaf curl disease of tomato in India.

Kumari P, et al.  Virus Res. 2010 Sep;152(1-2):19-29. doi: 10.1016/j.virusres.2010.05.015. Epub 2010 Jun 9.

PMID: 20540978
5

Diversity and phylogeography of begomoviruses and DNA satellites associated with the leaf curl and mosaic disease complex of eggplant.

Venkataravanappa V, et al.  Microb Pathog. 2023 Jul;180:106127. doi: 10.1016/j.micpath.2023.106127. Epub 2023 Apr 28.

PMID: 37119939
6

Complete nucleotide sequence of a begomovirus and associated betasatellite infecting croton (Croton bonplandianus) in Pakistan.

Hussain K, et al.  Arch Virol. 2011 Jun;156(6):1101-5. doi: 10.1007/s00705-011-0993-0. Epub 2011 Apr 13.

PMID: 21487662
7

Host-specific adaptation of diverse betasatellites associated with distinct Indian tomato-infecting begomoviruses.

Ranjan P, et al.  Virus Genes. 2014 Apr;48(2):334-42. doi: 10.1007/s11262-013-1031-y. Epub 2014 Jan 3.

PMID: 24384936
8

Molecular characterization and sequence variability of betasatellites associated with leaf curl disease of kenaf (hibiscus cannabinus L.) from different geographical locations of India.

Paul S, et al.  Acta Virol. 2008;52(4):251-6.

PMID: 19143482