Tomato leaf curl Joydebpur betasatellite

Basic Information

Abbreviation	ToLCJoB
Genebank Accession	AJ966244
Isolate	BD-Gaz-05
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGTGGGCGAGCGGGGTCTTTGGCGTCCGAGGTGGGTCCCACTGTATCCAAAAGAAGAAATATGGATTTGGGCAATGCAATTGGGCCTTAATTTTATGGGCTTCTATTATTGGGCTATGATATTGGACTCCAAGAATATATGAAACATAATATCTTATTAATACGTCATACAAATACAATTTGTACATATATCATATATGTACATTTACATCCATATCGTATTCCTCTATTACGTTTATGTTTACTACTGGAGCCTCGTTCATCATTAGGATATCAATACACTCAACCATGTCCTCACGCCGGAACTCCTTGATGGTCGAGTCTTTGTACATGATCTTTAGTAGGTTACATATTCCTTCCTCGATGTTGTTGAAGTCAAATGGACCTATGAACCCTTGATGGCCGTATGGGATCCTGAATTTGGCTTTGGCTAGTGCTGGTGACCGTGTGGATGTCAAATCCACATGAACCATGATGGAATCGTCGTTCGTCAACTTCACATTCACAGTGAATTCCATGCCATTCTTATTATCATACTTGATCGTCATAATGAATTCTGTGAGGTGAAACATGAGTGCCTCTCATTATATAGGAGTCGTATATCTTGATATATGAACCTAATTCAATTACGTGTGCTGCTCTAAATCACATATAATACGTGGTTAAGTGATGTTTGATAGTGACAACACTATCAAATATTCAAAAAGAAAAAGAAAACAAAATCATAATTATAAAATAATTATGAGGAAGAAAAAAAGGAAAATAAAAACAACTGAATGAAACATGAGTTTCAGTCAGATAAACAAATCAAAAAACAAACACTAAACACAACCTAAACACACACACACACAAACACAAACCCTATGAAAAGAAAAGGGAGCGCAGCGACGAAACAACCAAGAACTGACAACAACAATCACAGACGTGTGAAGAAAAAAAAAGAAAGAAAAGAAAAAAATGAATGATTGGACTCTACAATCATGAATATTCAAGTCCGTACACATGAGTTATTTACTGTTTTACCGCACGGTAAAATAGTAAATGATATTTACCCCGGGGTAAATATCTGAGACCCCAATAGGTAAATGAGACCCCAATTGAGGCACCGATATATTGGGGGCTCGGAAAGAGAAATAAATCCCGCGTTCCAAAAATGCCCCTAATTCTGTGTCTGCATGGCGCGTGGGAGTGCGCCTAAAAAGGTGACCTTCTCTCTCCAAAAACTCACCGGAACCACCAAACTGGCTGATTCCGGTGTCAATTTTCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCCTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession	CAI84641.1
Location	193-573
Gene Name	aC1
Protein Name	aC1 protein
Coding Region	ATGTTTCACCTCACAGAATTCATTATGACGATCAAGTATGATAATAAGAATGGCATGGAATTCACTGTGAATGTGAAGTTGACGAACGACGATTCCATCATGGTTCATGTGGATTTGACATCCACACGGTCACCAGCACTAGCCAAAGCCAAATTCAGGATCCCATACGGCCATCAAGGGTTCATAGGTCCATTTGACTTCAACAACATCGAGGAAGGAATATGTAACCTACTAAAGATCATGTACAAAGACTCGACCATCAAGGAGTTCCGGCGTGAGGACATGGTTGAGTGTATTGATATCCTAATGATGAACGAGGCTCCAGTAGTAAACATAAACGTAATAGAGGAATACGATATGGATGTAAATGTACATATATGA
Protein Sequence	MFHLTEFIMTIKYDNKNGMEFTVNVKLTNDDSIMVHVDLTSTRSPALAKAKFRIPYGHQGFIGPFDFNNIEEGICNLLKIMYKDSTIKEFRREDMVECIDILMMNEAPVVNINVIEEYDMDVNVHI

References More References in PubMed

1	Tomato leaf curl Joydebpur virus: a monopartite begomovirus causing severe leaf curl in tomato in West Bengal. Tiwari N, et al. Arch Virol. 2013 Jan;158(1):1-10. doi: 10.1007/s00705-012-1440-6. Epub 2012 Aug 24. PMID: 22918555
2	Molecular characterization of a new species of Begomovirus and betasatellite causing leaf curl disease of tomato in India. Kumari P, et al. Virus Res. 2010 Sep;152(1-2):19-29. doi: 10.1016/j.virusres.2010.05.015. Epub 2010 Jun 9. PMID: 20540978
3	A New Begomovirus Species Causing Tomato Leaf Curl Disease in Patna, India. Kumari P, et al. Plant Dis. 2009 May;93(5):545. doi: 10.1094/PDIS-93-5-0545B. PMID: 30764166
4	Host-specific adaptation of diverse betasatellites associated with distinct Indian tomato-infecting begomoviruses. Ranjan P, et al. Virus Genes. 2014 Apr;48(2):334-42. doi: 10.1007/s11262-013-1031-y. Epub 2014 Jan 3. PMID: 24384936
5	Complete nucleotide sequence of a begomovirus and associated betasatellite infecting croton (Croton bonplandianus) in Pakistan. Hussain K, et al. Arch Virol. 2011 Jun;156(6):1101-5. doi: 10.1007/s00705-011-0993-0. Epub 2011 Apr 13. PMID: 21487662
6	Molecular characterization and sequence variability of betasatellites associated with leaf curl disease of kenaf (hibiscus cannabinus L.) from different geographical locations of India. Paul S, et al. Acta Virol. 2008;52(4):251-6. PMID: 19143482
7	Diversity and phylogeography of begomoviruses and DNA satellites associated with the leaf curl and mosaic disease complex of eggplant. Venkataravanappa V, et al. Microb Pathog. 2023 Jul;180:106127. doi: 10.1016/j.micpath.2023.106127. Epub 2023 Apr 28. PMID: 37119939