Tomato leaf curl India betasatellite

Basic Information

Abbreviation	ToLCuINB
Genebank Accession	JQ012916
Isolate	IN-AC1S1-11
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGTGGGCGAGCGGTGCCGATGGCCTCTTGGTGGGTCCCATTGTATGTATTGACTTGATTTGACTTCTATTGGGCCACAATTAATGGGCTTGGAAGTGATTGGACCCGTATATAATATCCAATATGGATATTGGATATCTTGTTGTTAGTTGTTTTATCGTTGATGGGCTGATATGGAAATTAAACGGTGAACCTCTTATTGAATATATAGGGTTCGATTACATCCATCCCCTCAATCTCGGGGTTTTGAAGTACAAGTATATCGAGCCTTTCGATTATGTCTTCTATCTCGATCTCCTCGATGTTGGCCCCGTTGTTGGCGAATAAGAAATTCGCGATGATGTTCCCTTCGAATCCGTTGAAGTCGAATGGAATGTGCATGTTCCCGTACATGTATTTGATGACCCCTTCGTACTTGATGATTGCCGGTGTCTTGGTCGATACGAGTCGCATGTGAATGAAGAGCTTCATGCCGTCCATGATGCGTACGTCGACCGTGAATCGGACTCCCTGCTTGTTTGTTCCGCTCCTCGTCATCTTGATCGTGCGATTGAATTGTGTATTACGCGTGCTTTTATAGACTTAAACTTTAGATATTTAGCGTTGTTGTGTGGTTGTGAGTGATCGATTAGTATGTGATTGTGGATGAATAACATAAAGATATGATGGAGATGTATTACATGTGTGGTGATGTTGGATTGAATCCGTCATACGTGGGTTCGTATTCAATACAAGTATACAAGGGGTAGAAGATAAGGTATAAGAAATCTGAACGTGAGAAGACTGAACTGAAAAGGAAAGAAAACGAAAACAAAGAAAAAACTATCATCTCAGAAAAAATGGAAGCGCAGCGGATCGAAACAAGGAAGGATAAACAAAGATAAACAAAGAATATGCCCCTTGAATCGTCAAAGGTAAAAAAAGGAAACGTAAAAAACGACCCCGTTTTTGAAGTGATAAAAAAAGAAAAAATAGAAGAGAAAAAAATGGACGGTAAATCTGGCATTTACCGCGCGGTAAATAGTAAATAAGTGAATAAGAGTAAATAACAAAGGGTAAATTGATCCCCAATAGGTAAATTGAGACCCGATATATTGGGGATCAATTGGGTCTCAATATTTGGGGTTCCCTAAAATACCCCCGCTTTTATGCAGGATAGGCGCGTCGGAGTGCGCCGATAAAGTGAACATTCTCTCTCCTAAAATGAGACCCAATGCAATTTCCCGGTGATCGGAGTCGAATTTTCCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGAAACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession	AET50436.1
Location	182-538
Protein Name	C1 protein
Coding Region	ATGACGAGGAGCGGAACAAACAAGCAGGGAGTCCGATTCACGGTCGACGTACGCATCATGGACGGCATGAAGCTCTTCATTCACATGCGACTCGTATCGACCAAGACACCGGCAATCATCAAGTACGAAGGGGTCATCAAATACATGTACGGGAACATGCACATTCCATTCGACTTCAACGGATTCGAAGGGAACATCATCGCGAATTTCTTATTCGCCAACAACGGGGCCAACATCGAGGAGATCGAGATAGAAGACATAATCGAAAGGCTCGATATACTTGTACTTCAAAACCCCGAGATTGAGGGGATGGATGTAATCGAACCCTATATATTCAATAAGAGGTTCACCGTTTAA
Protein Sequence	MTRSGTNKQGVRFTVDVRIMDGMKLFIHMRLVSTKTPAIIKYEGVIKYMYGNMHIPFDFNGFEGNIIANFLFANNGANIEEIEIEDIIERLDILVLQNPEIEGMDVIEPYIFNKRFTV

References More References in PubMed

1	Diverse begomovirus-betasatellite complexes cause tomato leaf curl disease in the western India. Sangeeta, et al. Virus Res. 2023 Apr 15;328:199079. doi: 10.1016/j.virusres.2023.199079. Epub 2023 Mar 3. PMID: 36813240
2	Two distinct monopartite begomovirus-betasatellite complexes in western India cause tomato leaf curl disease. Sangeeta, et al. Virus Res. 2021 Apr 2;295:198319. doi: 10.1016/j.virusres.2021.198319. Epub 2021 Jan 26. PMID: 33508355
3	Transreplication Preference of the Tomato Leaf Curl Joydebpur Virus for a Noncognate Betasatellite through Iteron Resemblance on Nicotiana bethamiana. Vo TTB, et al. Microorganisms. 2023 Dec 1;11(12):2907. doi: 10.3390/microorganisms11122907. PMID: 38138051
4	Differential pathogenicity among Tomato leaf curl Gujarat virus isolates from India. Ranjan P, et al. Virus Genes. 2013 Dec;47(3):524-31. doi: 10.1007/s11262-013-0977-0. Epub 2013 Sep 12. PMID: 24026875
5	Genetic variability of Cotton leaf curl betasatellite in Northern India. Sohrab SS, et al. Saudi J Biol Sci. 2014 Dec;21(6):626-31. doi: 10.1016/j.sjbs.2014.11.006. Epub 2014 Nov 13. PMID: 25473373
6	Tomato Leaf Curl New Delhi Virus: An Emerging Virus Complex Threatening Vegetable and Fiber Crops. Moriones E, et al. Viruses. 2017 Sep 21;9(10):264. doi: 10.3390/v9100264. PMID: 28934148
7	A recombinant Tobacco curly shoot virus causes leaf curl disease in tomato in a north-eastern state of India and has potentiality to trans-replicate a non-cognate betasatellite. Shilpi S, et al. Virus Genes. 2015 Feb;50(1):87-96. doi: 10.1007/s11262-014-1141-1. Epub 2014 Nov 20. PMID: 25410052
8	Molecular analysis, infectivity and host range of Tomato leaf curl Karnataka virus associated with Corchorus yellow vein mosaic betasatellite. Dokka N, et al. Virus Res. 2021 Oct 2;303:198521. doi: 10.1016/j.virusres.2021.198521. Epub 2021 Jul 24. PMID: 34314770
9	A new begomovirus-betasatellite complex is associated with chilli leaf curl disease in Sri Lanka. Senanayake DM, et al. Virus Genes. 2013 Feb;46(1):128-39. doi: 10.1007/s11262-012-0836-4. Epub 2012 Oct 23. PMID: 23090833
10	Characterization of a new begomovirus and betasatellite associated with chilli leaf curl disease in India. Khan ZA, et al. Arch Virol. 2017 Feb;162(2):561-565. doi: 10.1007/s00705-016-3096-0. Epub 2016 Oct 13. PMID: 27738844