Tomato leaf curl India betasatellite


Basic Information

Abbreviation ToLCuINB
Genebank Accession JQ012916
Isolate IN-AC1S1-11
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGGTGCCGATGGCCTCTTGGTGGGTCCCATTGTATGTATTGACTTGATTTGACTTCTATTGGGCCACAATTAATGGGCTTGGAAGTGATTGGACCCGTATATAATATCCAATATGGATATTGGATATCTTGTTGTTAGTTGTTTTATCGTTGATGGGCTGATATGGAAATTAAACGGTGAACCTCTTATTGAATATATAGGGTTCGATTACATCCATCCCCTCAATCTCGGGGTTTTGAAGTACAAGTATATCGAGCCTTTCGATTATGTCTTCTATCTCGATCTCCTCGATGTTGGCCCCGTTGTTGGCGAATAAGAAATTCGCGATGATGTTCCCTTCGAATCCGTTGAAGTCGAATGGAATGTGCATGTTCCCGTACATGTATTTGATGACCCCTTCGTACTTGATGATTGCCGGTGTCTTGGTCGATACGAGTCGCATGTGAATGAAGAGCTTCATGCCGTCCATGATGCGTACGTCGACCGTGAATCGGACTCCCTGCTTGTTTGTTCCGCTCCTCGTCATCTTGATCGTGCGATTGAATTGTGTATTACGCGTGCTTTTATAGACTTAAACTTTAGATATTTAGCGTTGTTGTGTGGTTGTGAGTGATCGATTAGTATGTGATTGTGGATGAATAACATAAAGATATGATGGAGATGTATTACATGTGTGGTGATGTTGGATTGAATCCGTCATACGTGGGTTCGTATTCAATACAAGTATACAAGGGGTAGAAGATAAGGTATAAGAAATCTGAACGTGAGAAGACTGAACTGAAAAGGAAAGAAAACGAAAACAAAGAAAAAACTATCATCTCAGAAAAAATGGAAGCGCAGCGGATCGAAACAAGGAAGGATAAACAAAGATAAACAAAGAATATGCCCCTTGAATCGTCAAAGGTAAAAAAAGGAAACGTAAAAAACGACCCCGTTTTTGAAGTGATAAAAAAAGAAAAAATAGAAGAGAAAAAAATGGACGGTAAATCTGGCATTTACCGCGCGGTAAATAGTAAATAAGTGAATAAGAGTAAATAACAAAGGGTAAATTGATCCCCAATAGGTAAATTGAGACCCGATATATTGGGGATCAATTGGGTCTCAATATTTGGGGTTCCCTAAAATACCCCCGCTTTTATGCAGGATAGGCGCGTCGGAGTGCGCCGATAAAGTGAACATTCTCTCTCCTAAAATGAGACCCAATGCAATTTCCCGGTGATCGGAGTCGAATTTTCCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGAAACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession AET50436.1
Location 182-538
Protein Name C1 protein
Coding Region ATGACGAGGAGCGGAACAAACAAGCAGGGAGTCCGATTCACGGTCGACGTACGCATCATGGACGGCATGAAGCTCTTCATTCACATGCGACTCGTATCGACCAAGACACCGGCAATCATCAAGTACGAAGGGGTCATCAAATACATGTACGGGAACATGCACATTCCATTCGACTTCAACGGATTCGAAGGGAACATCATCGCGAATTTCTTATTCGCCAACAACGGGGCCAACATCGAGGAGATCGAGATAGAAGACATAATCGAAAGGCTCGATATACTTGTACTTCAAAACCCCGAGATTGAGGGGATGGATGTAATCGAACCCTATATATTCAATAAGAGGTTCACCGTTTAA
Protein Sequence MTRSGTNKQGVRFTVDVRIMDGMKLFIHMRLVSTKTPAIIKYEGVIKYMYGNMHIPFDFNGFEGNIIANFLFANNGANIEEIEIEDIIERLDILVLQNPEIEGMDVIEPYIFNKRFTV

References More References in PubMed

1

Diverse begomovirus-betasatellite complexes cause tomato leaf curl disease in the western India.

Sangeeta, et al.  Virus Res. 2023 Apr 15;328:199079. doi: 10.1016/j.virusres.2023.199079. Epub 2023 Mar 3.

PMID: 36813240

2

Two distinct monopartite begomovirus-betasatellite complexes in western India cause tomato leaf curl disease.

Sangeeta, et al.  Virus Res. 2021 Apr 2;295:198319. doi: 10.1016/j.virusres.2021.198319. Epub 2021 Jan 26.

PMID: 33508355

3

Tomato Leaf Curl New Delhi Virus: An Emerging Virus Complex Threatening Vegetable and Fiber Crops.

Moriones E, et al.  Viruses. 2017 Sep 21;9(10):264. doi: 10.3390/v9100264.

PMID: 28934148

4

Transreplication Preference of the Tomato Leaf Curl Joydebpur Virus for a Noncognate Betasatellite through Iteron Resemblance on Nicotiana bethamiana.

Vo TTB, et al.  Microorganisms. 2023 Dec 1;11(12):2907. doi: 10.3390/microorganisms11122907.

PMID: 38138051

5

Genetic variability of Cotton leaf curl betasatellite in Northern India.

Sohrab SS, et al.  Saudi J Biol Sci. 2014 Dec;21(6):626-31. doi: 10.1016/j.sjbs.2014.11.006. Epub 2014 Nov 13.

PMID: 25473373

6

Detection and characterization of a new betasatellite: variation in disease symptoms of tomato leaf curl Pakistan virus-India due to associated betasatellite.

Kumar J, et al.  Arch Virol. 2013 Jan;158(1):257-61. doi: 10.1007/s00705-012-1486-5. Epub 2012 Sep 29.

PMID: 23053516

7

A New Begomovirus Species in Association with Betasatellite Causing Tomato Leaf Curl Disease in Gandhinagar, India.

Rathore S, et al.  Plant Dis. 2014 Mar;98(3):428. doi: 10.1094/PDIS-07-13-0719-PDN.

PMID: 30708408

8

A new betasatellite associated with cotton leaf curl Burewala virus infecting tomato in India: influence on symptoms and viral accumulation.

Kumar J, et al.  Arch Virol. 2013 Jun;158(6):1349-53. doi: 10.1007/s00705-013-1613-y. Epub 2013 Jan 30.

PMID: 23361863

9

Association of tomato leaf curl Gujarat virus and tomato leaf curl Bangladesh betasatellite on papaya showing typical leaf curl symptoms in North India.

Varun P, et al.  3 Biotech. 2018 May;8(5):243. doi: 10.1007/s13205-018-1254-7. Epub 2018 May 8.

PMID: 29744275

10

Characterization of a new begomovirus and betasatellite associated with chilli leaf curl disease in India.

Khan ZA, et al.  Arch Virol. 2017 Feb;162(2):561-565. doi: 10.1007/s00705-016-3096-0. Epub 2016 Oct 13.

PMID: 27738844