Tomato leaf curl India betasatellite

Basic Information

Abbreviation	ToLCuINB
Genebank Accession	JQ012916
Isolate	IN-AC1S1-11
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGTGGGCGAGCGGTGCCGATGGCCTCTTGGTGGGTCCCATTGTATGTATTGACTTGATTTGACTTCTATTGGGCCACAATTAATGGGCTTGGAAGTGATTGGACCCGTATATAATATCCAATATGGATATTGGATATCTTGTTGTTAGTTGTTTTATCGTTGATGGGCTGATATGGAAATTAAACGGTGAACCTCTTATTGAATATATAGGGTTCGATTACATCCATCCCCTCAATCTCGGGGTTTTGAAGTACAAGTATATCGAGCCTTTCGATTATGTCTTCTATCTCGATCTCCTCGATGTTGGCCCCGTTGTTGGCGAATAAGAAATTCGCGATGATGTTCCCTTCGAATCCGTTGAAGTCGAATGGAATGTGCATGTTCCCGTACATGTATTTGATGACCCCTTCGTACTTGATGATTGCCGGTGTCTTGGTCGATACGAGTCGCATGTGAATGAAGAGCTTCATGCCGTCCATGATGCGTACGTCGACCGTGAATCGGACTCCCTGCTTGTTTGTTCCGCTCCTCGTCATCTTGATCGTGCGATTGAATTGTGTATTACGCGTGCTTTTATAGACTTAAACTTTAGATATTTAGCGTTGTTGTGTGGTTGTGAGTGATCGATTAGTATGTGATTGTGGATGAATAACATAAAGATATGATGGAGATGTATTACATGTGTGGTGATGTTGGATTGAATCCGTCATACGTGGGTTCGTATTCAATACAAGTATACAAGGGGTAGAAGATAAGGTATAAGAAATCTGAACGTGAGAAGACTGAACTGAAAAGGAAAGAAAACGAAAACAAAGAAAAAACTATCATCTCAGAAAAAATGGAAGCGCAGCGGATCGAAACAAGGAAGGATAAACAAAGATAAACAAAGAATATGCCCCTTGAATCGTCAAAGGTAAAAAAAGGAAACGTAAAAAACGACCCCGTTTTTGAAGTGATAAAAAAAGAAAAAATAGAAGAGAAAAAAATGGACGGTAAATCTGGCATTTACCGCGCGGTAAATAGTAAATAAGTGAATAAGAGTAAATAACAAAGGGTAAATTGATCCCCAATAGGTAAATTGAGACCCGATATATTGGGGATCAATTGGGTCTCAATATTTGGGGTTCCCTAAAATACCCCCGCTTTTATGCAGGATAGGCGCGTCGGAGTGCGCCGATAAAGTGAACATTCTCTCTCCTAAAATGAGACCCAATGCAATTTCCCGGTGATCGGAGTCGAATTTTCCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGAAACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession	AET50436.1
Location	182-538
Protein Name	C1 protein
Coding Region	ATGACGAGGAGCGGAACAAACAAGCAGGGAGTCCGATTCACGGTCGACGTACGCATCATGGACGGCATGAAGCTCTTCATTCACATGCGACTCGTATCGACCAAGACACCGGCAATCATCAAGTACGAAGGGGTCATCAAATACATGTACGGGAACATGCACATTCCATTCGACTTCAACGGATTCGAAGGGAACATCATCGCGAATTTCTTATTCGCCAACAACGGGGCCAACATCGAGGAGATCGAGATAGAAGACATAATCGAAAGGCTCGATATACTTGTACTTCAAAACCCCGAGATTGAGGGGATGGATGTAATCGAACCCTATATATTCAATAAGAGGTTCACCGTTTAA
Protein Sequence	MTRSGTNKQGVRFTVDVRIMDGMKLFIHMRLVSTKTPAIIKYEGVIKYMYGNMHIPFDFNGFEGNIIANFLFANNGANIEEIEIEDIIERLDILVLQNPEIEGMDVIEPYIFNKRFTV

References More References in PubMed

1	Two distinct monopartite begomovirus-betasatellite complexes in western India cause tomato leaf curl disease. Sangeeta, et al. Virus Res. 2021 Apr 2;295:198319. doi: 10.1016/j.virusres.2021.198319. Epub 2021 Jan 26. PMID: 33508355
2	Diverse begomovirus-betasatellite complexes cause tomato leaf curl disease in the western India. Sangeeta, et al. Virus Res. 2023 Apr 15;328:199079. doi: 10.1016/j.virusres.2023.199079. Epub 2023 Mar 3. PMID: 36813240
3	Transreplication Preference of the Tomato Leaf Curl Joydebpur Virus for a Noncognate Betasatellite through Iteron Resemblance on Nicotiana bethamiana. Vo TTB, et al. Microorganisms. 2023 Dec 1;11(12):2907. doi: 10.3390/microorganisms11122907. PMID: 38138051
4	Genetic variability of Cotton leaf curl betasatellite in Northern India. Sohrab SS, et al. Saudi J Biol Sci. 2014 Dec;21(6):626-31. doi: 10.1016/j.sjbs.2014.11.006. Epub 2014 Nov 13. PMID: 25473373
5	Tomato Leaf Curl New Delhi Virus: An Emerging Virus Complex Threatening Vegetable and Fiber Crops. Moriones E, et al. Viruses. 2017 Sep 21;9(10):264. doi: 10.3390/v9100264. PMID: 28934148
6	Differential pathogenicity among Tomato leaf curl Gujarat virus isolates from India. Ranjan P, et al. Virus Genes. 2013 Dec;47(3):524-31. doi: 10.1007/s11262-013-0977-0. Epub 2013 Sep 12. PMID: 24026875
7	A New Begomovirus Species Causing Tomato Leaf Curl Disease in Patna, India. Kumari P, et al. Plant Dis. 2009 May;93(5):545. doi: 10.1094/PDIS-93-5-0545B. PMID: 30764166
8	A New Begomovirus Species in Association with Betasatellite Causing Tomato Leaf Curl Disease in Gandhinagar, India. Rathore S, et al. Plant Dis. 2014 Mar;98(3):428. doi: 10.1094/PDIS-07-13-0719-PDN. PMID: 30708408
9	Association of tomato leaf curl Gujarat virus and tomato leaf curl Bangladesh betasatellite on papaya showing typical leaf curl symptoms in North India. Varun P, et al. 3 Biotech. 2018 May;8(5):243. doi: 10.1007/s13205-018-1254-7. Epub 2018 May 8. PMID: 29744275
10	A recombinant Tobacco curly shoot virus causes leaf curl disease in tomato in a north-eastern state of India and has potentiality to trans-replicate a non-cognate betasatellite. Shilpi S, et al. Virus Genes. 2015 Feb;50(1):87-96. doi: 10.1007/s11262-014-1141-1. Epub 2014 Nov 20. PMID: 25410052