Tomato leaf curl Gandhinagar betasatellite

Basic Information

Abbreviation	ToLCGanB
Genebank Accession	KC952006
Isolate	IN-pToGNbH14-12
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGTGGGCGAGCGGTGACCGATGGCTTCTTGGTGGGTCCCACGTTGGAACAGAAGGGTAAATGGGCTGGTCTTCATGTAATTGGGCCTGAAATGAATTGGGCTTGGACCAGTAGATTCGTGACTGGTCCAATAACAGGTAATAACAATTGGGCTAATTATTAAAGTGCTCATTTTATTCATTATAAATTCATTACACACTCACACACTCACATTCGTACATACATCGTATGCATCTCCTATACGTATATCAACTAATGGAGCCTCTTCCATCATGAGTAAATCAATTGTCTCCACCATATCCTCTTGTCGAAACTCTCCGATATCAGAATTCTTGTACATGATTTTGAATAGACTCTGTATACCTTCCTCTAGAGCGTTGAAATCGAACGGAGGTATGATCCCATCATGGCCGTATGGGATCATGAAGGTTTTCTTCGCCAGGGCTGGTGATTGTGTTGAGAACAATTCAATCTGTACTAGGATTGAATTGTCTTCGTTGATTTTCACGTCGATTGTAAACTCCATTCCCCTCTTGTTATCATATTTGATCGTCATTTTTGTAATTGTGAAATATACATGAGTTTGTCGTCTTAAATAGTGGCCATATATCTAGATATATGGACATAATTCATGTACGTGTTTCAATAAATATCATATGAATTGTAGTGGAGTTAAGATGATTGATAGTGACAAAACTATCAATCATGTGTTCTATATGAAAAGAAAAGTTAAAACTAATCATCTAGATGATTAGGAAAAGAGAAAAAAAAGAAAATTAAAAAATGAATTCAAAAGAATGCAGAAGATATAATAAGAAAGAAAAGAATGAAAAAAATAATCTACATATCTTGAGAAAAATATGGCCCCGCAGGGGAACTGACACAAAACTATAAAACTGGAAGAAACGTGAGAGAAATACGAAATCAAAACGTCCCGTTTTGATGAGGGAAAGAAAAAAAAAAGAAAATAAAAATTAATAAGTTATGGAAGGACAAGCTGACTGTGTGGTTTTACCATTTACGGCACTGTAAATGGTAGGAGGTAATAGTTAGGTAAAAAAAGGAGTCCCCGATAGGTAAATGTGTCCCCAATATATCGGTGACTTAATTGGTGTCAGGAGAGAGAAATAATTCCCGGATTCCAAAAATACCCCCTTATCTGTGTCTGGTAGGCGCGTGGGAGTGCGCTGAAAAAGTTGACCGTCTCTCTCCAAAAACTCACCGGAACACCCAAACTGGCTGATTCCGGCATCAATTTACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACAAGCTTACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession	AGT29633.1
Location	201-557
Gene Name	c1
Protein Name	C1 protein
Coding Region	ATGACGATCAAATATGATAACAAGAGGGGAATGGAGTTTACAATCGACGTGAAAATCAACGAAGACAATTCAATCCTAGTACAGATTGAATTGTTCTCAACACAATCACCAGCCCTGGCGAAGAAAACCTTCATGATCCCATACGGCCATGATGGGATCATACCTCCGTTCGATTTCAACGCTCTAGAGGAAGGTATACAGAGTCTATTCAAAATCATGTACAAGAATTCTGATATCGGAGAGTTTCGACAAGAGGATATGGTGGAGACAATTGATTTACTCATGATGGAAGAGGCTCCATTAGTTGATATACGTATAGGAGATGCATACGATGTATGTACGAATGTGAGTGTGTGA
Protein Sequence	MTIKYDNKRGMEFTIDVKINEDNSILVQIELFSTQSPALAKKTFMIPYGHDGIIPPFDFNALEEGIQSLFKIMYKNSDIGEFRQEDMVETIDLLMMEEAPLVDIRIGDAYDVCTNVSV

References More References in PubMed

1	Two distinct monopartite begomovirus-betasatellite complexes in western India cause tomato leaf curl disease. Sangeeta, et al. Virus Res. 2021 Apr 2;295:198319. doi: 10.1016/j.virusres.2021.198319. Epub 2021 Jan 26. PMID: 33508355
2	Diverse begomovirus-betasatellite complexes cause tomato leaf curl disease in the western India. Sangeeta, et al. Virus Res. 2023 Apr 15;328:199079. doi: 10.1016/j.virusres.2023.199079. Epub 2023 Mar 3. PMID: 36813240
3	A New Begomovirus Species in Association with Betasatellite Causing Tomato Leaf Curl Disease in Gandhinagar, India. Rathore S, et al. Plant Dis. 2014 Mar;98(3):428. doi: 10.1094/PDIS-07-13-0719-PDN. PMID: 30708408
4	A Distinct Strain of Tomato leaf curl Sudan virus Causes Tomato Leaf Curl Disease in Oman. Khan AJ, et al. Plant Dis. 2013 Nov;97(11):1396-1402. doi: 10.1094/PDIS-02-13-0210-RE. PMID: 30708466
5	Identification and molecular characterization of a new recombinant begomovirus and associated betasatellite DNA infecting Capsicum annuum in India. Bhatt BS, et al. Arch Virol. 2016 May;161(5):1389-94. doi: 10.1007/s00705-016-2769-z. Epub 2016 Jan 30. PMID: 26831933