Tomato leaf curl betasatellite

Basic Information

Abbreviation	ToLCB
Genebank Accession	AJ316036
Isolate	PK-RYK-97
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGTGGGCGAGCGGTGACCGGTGGCTTCTTGGTGGGTCCCACGTTGAAGGAGAAAGATAAATGGGCTGGATCCATGCAATTGGGCCTTAATTTGAATGGGCTTGGACCAGTAGATTCGGGACTGGGCCAATACAGTGAGATAAGAAATGGGTTCGTAAATTAAAACAAAGGATTTATTCATTTCTAATACATTACACACTCACACACACACATTCGTACATACATCGTATTCATCTCTTATACGTATATCAAGTAATGGAGCTTCTTCCATCATGAGTAAATCAATTGTCTCCACCATATCCTCTTGTCGAAACTCTCCTATATCAGAATCCTTGTACATGATTTGCAACAGATTTTGTATACCTTCCTCTAGAGCGTTGAAGTCGAACGGAAGTATGATCCCATCATGGCCGTATGGGATCATGAAGGTCTTCTTTGCCAGGGCTGGTGATTGTGTTGAGAACAATTCAATCTGTACTAGGATTGAATTGTCCTCGTTGATTTTCACGTCGATGGTAAACTCCATCCCCCTTTTGTTATTATATTTGATCGTCATTCTTGTAATTGTGAAATATACATGAGTTTAGTCGTCTTAAATAGTGGCCATATATCCAGATATATGGACATAATTATATACGTGTTTCAATAAATATCATATGAATTGTAGTGGAGTTAAGATGATTGATAGTGACAAAACTATCAATCATGTGTTCTATATGAAAAGAAAAAATAAACCTAATCATCTTGATGATTAGGATAGGATGAAAAAAAATTGTTATTGAGAGTGATAGTCGTACGGGTAAAACAAAATTAAAAAGAATAGAATTAAAAGAATAAAACATGGAAGGAAAATACAAACCTGATCACAAACATAAATCTCTTGAGAAAATTTGGGAGCGCAGCAAAAAAAAAACCAAACAATGAAATAAACGAGAACATGAGCAGAGAAAACGGAAAAGACAAACGAAACTAATAGCTTCCTCTTGTGAAAATGAGAAAATCCGTACACAGTAATTAATCAGTAATTACTGGCGCAGTAAATGTGAATAAAATTAAAACAGCGGTTAATTTTGGAGACTCCAATAGGTAAATAAGATACCAATTGAGGCACCGATATAATCCGGTGTCTCGGAAAGAGAAATAAATCCCGGATCCCCAAAATACCCCTAATTATGTGTCTGGAAGGCGCGTGGTAATGCGCTGAAAAAGGTGACCTTCTCTCTCCAGAAAATCACCGGAACGGCCAAACTGGCTGATTCCGGCATCAATTTACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCAGGAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession	CAC87062.1
Location	201-557
Gene Name	C1
Protein Name	putative C1 protein
Coding Region	ATGACGATCAAATATAATAACAAAAGGGGGATGGAGTTTACCATCGACGTGAAAATCAACGAGGACAATTCAATCCTAGTACAGATTGAATTGTTCTCAACACAATCACCAGCCCTGGCAAAGAAGACCTTCATGATCCCATACGGCCATGATGGGATCATACTTCCGTTCGACTTCAACGCTCTAGAGGAAGGTATACAAAATCTGTTGCAAATCATGTACAAGGATTCTGATATAGGAGAGTTTCGACAAGAGGATATGGTGGAGACAATTGATTTACTCATGATGGAAGAAGCTCCATTACTTGATATACGTATAAGAGATGAATACGATGTATGTACGAATGTGTGTGTGTGA
Protein Sequence	MTIKYNNKRGMEFTIDVKINEDNSILVQIELFSTQSPALAKKTFMIPYGHDGIILPFDFNALEEGIQNLLQIMYKDSDIGEFRQEDMVETIDLLMMEEAPLLDIRIRDEYDVCTNVCV

References More References in PubMed

1	Diverse begomovirus-betasatellite complexes cause tomato leaf curl disease in the western India. Sangeeta, et al. Virus Res. 2023 Apr 15;328:199079. doi: 10.1016/j.virusres.2023.199079. Epub 2023 Mar 3. PMID: 36813240
2	Transreplication Preference of the Tomato Leaf Curl Joydebpur Virus for a Noncognate Betasatellite through Iteron Resemblance on Nicotiana bethamiana. Vo TTB, et al. Microorganisms. 2023 Dec 1;11(12):2907. doi: 10.3390/microorganisms11122907. PMID: 38138051
3	Two distinct monopartite begomovirus-betasatellite complexes in western India cause tomato leaf curl disease. Sangeeta, et al. Virus Res. 2021 Apr 2;295:198319. doi: 10.1016/j.virusres.2021.198319. Epub 2021 Jan 26. PMID: 33508355
4	Genetic diversity and infectivity analysis of tomato yellow leaf curl virus Oman and its associated betasatellite. Al-Matroushi AR, et al. Cell Mol Biol (Noisy-le-grand). 2024 Nov 27;70(11):101-108. doi: 10.14715/cmb/2024.70.11.15. PMID: 39707774
5	Molecular analysis, infectivity and host range of Tomato leaf curl Karnataka virus associated with Corchorus yellow vein mosaic betasatellite. Dokka N, et al. Virus Res. 2021 Oct 2;303:198521. doi: 10.1016/j.virusres.2021.198521. Epub 2021 Jul 24. PMID: 34314770
6	N-terminal acetylation of the betaC1 protein encoded by the betasatellite of tomato yellow leaf curl China virus is critical for its viral pathogenicity. Wang Y, et al. Virology. 2023 Sep;586:1-11. doi: 10.1016/j.virol.2023.07.003. Epub 2023 Jul 14. PMID: 37473501
7	Tomato Leaf Curl New Delhi Virus: An Emerging Virus Complex Threatening Vegetable and Fiber Crops. Moriones E, et al. Viruses. 2017 Sep 21;9(10):264. doi: 10.3390/v9100264. PMID: 28934148
8	Molecular and biological characterization of Chilli leaf curl virus and associated Tomato leaf curl betasatellite infecting tobacco in Oman. Shahid MS, et al. Virol J. 2019 Nov 9;16(1):131. doi: 10.1186/s12985-019-1235-4. PMID: 31706358
9	Tomato leaf curl New Delhi virus: a widespread bipartite begomovirus in the territory of monopartite begomoviruses. Zaidi SS, et al. Mol Plant Pathol. 2017 Sep;18(7):901-911. doi: 10.1111/mpp.12481. Epub 2016 Oct 17. PMID: 27553982
10	The Global Dimension of Tomato Yellow Leaf Curl Disease: Current Status and Breeding Perspectives. Yan Z, et al. Microorganisms. 2021 Apr 1;9(4):740. doi: 10.3390/microorganisms9040740. PMID: 33916319