Tomato leaf curl betasatellite

Basic Information

Abbreviation	ToLCB
Genebank Accession	AJ316036
Isolate	PK-RYK-97
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGTGGGCGAGCGGTGACCGGTGGCTTCTTGGTGGGTCCCACGTTGAAGGAGAAAGATAAATGGGCTGGATCCATGCAATTGGGCCTTAATTTGAATGGGCTTGGACCAGTAGATTCGGGACTGGGCCAATACAGTGAGATAAGAAATGGGTTCGTAAATTAAAACAAAGGATTTATTCATTTCTAATACATTACACACTCACACACACACATTCGTACATACATCGTATTCATCTCTTATACGTATATCAAGTAATGGAGCTTCTTCCATCATGAGTAAATCAATTGTCTCCACCATATCCTCTTGTCGAAACTCTCCTATATCAGAATCCTTGTACATGATTTGCAACAGATTTTGTATACCTTCCTCTAGAGCGTTGAAGTCGAACGGAAGTATGATCCCATCATGGCCGTATGGGATCATGAAGGTCTTCTTTGCCAGGGCTGGTGATTGTGTTGAGAACAATTCAATCTGTACTAGGATTGAATTGTCCTCGTTGATTTTCACGTCGATGGTAAACTCCATCCCCCTTTTGTTATTATATTTGATCGTCATTCTTGTAATTGTGAAATATACATGAGTTTAGTCGTCTTAAATAGTGGCCATATATCCAGATATATGGACATAATTATATACGTGTTTCAATAAATATCATATGAATTGTAGTGGAGTTAAGATGATTGATAGTGACAAAACTATCAATCATGTGTTCTATATGAAAAGAAAAAATAAACCTAATCATCTTGATGATTAGGATAGGATGAAAAAAAATTGTTATTGAGAGTGATAGTCGTACGGGTAAAACAAAATTAAAAAGAATAGAATTAAAAGAATAAAACATGGAAGGAAAATACAAACCTGATCACAAACATAAATCTCTTGAGAAAATTTGGGAGCGCAGCAAAAAAAAAACCAAACAATGAAATAAACGAGAACATGAGCAGAGAAAACGGAAAAGACAAACGAAACTAATAGCTTCCTCTTGTGAAAATGAGAAAATCCGTACACAGTAATTAATCAGTAATTACTGGCGCAGTAAATGTGAATAAAATTAAAACAGCGGTTAATTTTGGAGACTCCAATAGGTAAATAAGATACCAATTGAGGCACCGATATAATCCGGTGTCTCGGAAAGAGAAATAAATCCCGGATCCCCAAAATACCCCTAATTATGTGTCTGGAAGGCGCGTGGTAATGCGCTGAAAAAGGTGACCTTCTCTCTCCAGAAAATCACCGGAACGGCCAAACTGGCTGATTCCGGCATCAATTTACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCAGGAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession	CAC87062.1
Location	201-557
Gene Name	C1
Protein Name	putative C1 protein
Coding Region	ATGACGATCAAATATAATAACAAAAGGGGGATGGAGTTTACCATCGACGTGAAAATCAACGAGGACAATTCAATCCTAGTACAGATTGAATTGTTCTCAACACAATCACCAGCCCTGGCAAAGAAGACCTTCATGATCCCATACGGCCATGATGGGATCATACTTCCGTTCGACTTCAACGCTCTAGAGGAAGGTATACAAAATCTGTTGCAAATCATGTACAAGGATTCTGATATAGGAGAGTTTCGACAAGAGGATATGGTGGAGACAATTGATTTACTCATGATGGAAGAAGCTCCATTACTTGATATACGTATAAGAGATGAATACGATGTATGTACGAATGTGTGTGTGTGA
Protein Sequence	MTIKYNNKRGMEFTIDVKINEDNSILVQIELFSTQSPALAKKTFMIPYGHDGIILPFDFNALEEGIQNLLQIMYKDSDIGEFRQEDMVETIDLLMMEEAPLLDIRIRDEYDVCTNVCV

References More References in PubMed

1	Diverse begomovirus-betasatellite complexes cause tomato leaf curl disease in the western India. Sangeeta, et al. Virus Res. 2023 Apr 15;328:199079. doi: 10.1016/j.virusres.2023.199079. Epub 2023 Mar 3. PMID: 36813240
2	Genetic diversity and infectivity analysis of tomato yellow leaf curl virus Oman and its associated betasatellite. Al-Matroushi AR, et al. Cell Mol Biol (Noisy-le-grand). 2024 Nov 27;70(11):101-108. doi: 10.14715/cmb/2024.70.11.15. PMID: 39707774
3	Tomato leaf curl New Delhi virus: a widespread bipartite begomovirus in the territory of monopartite begomoviruses. Zaidi SS, et al. Mol Plant Pathol. 2017 Sep;18(7):901-911. doi: 10.1111/mpp.12481. Epub 2016 Oct 17. PMID: 27553982
4	The Global Dimension of Tomato Yellow Leaf Curl Disease: Current Status and Breeding Perspectives. Yan Z, et al. Microorganisms. 2021 Apr 1;9(4):740. doi: 10.3390/microorganisms9040740. PMID: 33916319
5	Accumulation and transmission of alphasatellite, betasatellite and tomato yellow leaf curl virus in susceptible and Ty-1-resistant tomato plants. Conflon D, et al. Virus Res. 2018 Jul 15;253:124-134. doi: 10.1016/j.virusres.2018.06.003. Epub 2018 Jun 15. PMID: 29908896
6	Transreplication Preference of the Tomato Leaf Curl Joydebpur Virus for a Noncognate Betasatellite through Iteron Resemblance on Nicotiana bethamiana. Vo TTB, et al. Microorganisms. 2023 Dec 1;11(12):2907. doi: 10.3390/microorganisms11122907. PMID: 38138051
7	Tomato Leaf Curl New Delhi Virus: An Emerging Virus Complex Threatening Vegetable and Fiber Crops. Moriones E, et al. Viruses. 2017 Sep 21;9(10):264. doi: 10.3390/v9100264. PMID: 28934148
8	Distinct tomato yellow leaf curl Chuxiong virus isolated from whiteflies and plants in China and its symptom determinant and suppressor of post-transcriptional gene silencing. Xie Y, et al. Virology. 2024 Jun;594:110040. doi: 10.1016/j.virol.2024.110040. Epub 2024 Mar 5. PMID: 38471198
9	Two distinct monopartite begomovirus-betasatellite complexes in western India cause tomato leaf curl disease. Sangeeta, et al. Virus Res. 2021 Apr 2;295:198319. doi: 10.1016/j.virusres.2021.198319. Epub 2021 Jan 26. PMID: 33508355
10	Molecular characterization of a new species of Begomovirus and betasatellite causing leaf curl disease of tomato in India. Kumari P, et al. Virus Res. 2010 Sep;152(1-2):19-29. doi: 10.1016/j.virusres.2010.05.015. Epub 2010 Jun 9. PMID: 20540978