Tomato leaf curl Bangladesh betasatellite

Basic Information

Abbreviation ToLCBDB
Genebank Accession AJ542489
Isolate BD-Gaz-01
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGGGGTTTTTGGCGTTCCAGGTGGGTCCCACCATATCCAAAAGAAGAAAAATTGGGCTGGGTCAATGCAATTGGGCCGTAATTGAAATGGGCTTGGACCAGTAGATTCGAGACTGGGCCATATAATTAAATAACAAATGGGCTCACAATCAAAACAAAGTCTTTATTCATGTGAAATACATTACACACTCAGACACACACATTCGTACATACATCATAATCATCCCATATACGTATGTCAACTACCGGGGCCTCATGCATCATCAGTATATCTATAGCCTCTACCATGTCCTCCTGTCGAAATTCTCTAACATGAGAATCCTTGTACATGATCCTCAACATATTATGTATCCCTTCCTCTATATTGTTGAAGTCGAAAGGTGGTATGATCCCATCATGGCCGTATGTGATCAGGAACGTTTTCTTAGCCATGGCTGGTGATCTTGTTGAGCACAATGCAATCTGCACCATAATTGAATTGTCGTCTTTGAGTTTCACATCTATAGTAAACTCCATCCCCTTGGTGTTATTATATTTGATCGTCATTTCTTTAATTGTGAAATATACATGAGTTCAGTCGTCCTAAATAGTGGCCATATATCAGGATATATGGACATAATTCATATACGTGGTACAATAATTATCATAGGAAGTGGAGTTAATTTAGATATGGTTGATAGTTACATGACTATCAATCCTCTTTAAAAAAAAGGAAAAAAGAAAACTTAATCATGAAAGGATTAAGTCGGGAAGAATAAAAGGAAAAAATAAAAGAAATAGAAAATCAAGAAAGAAATCAAAAATCATGAAAATTTAAAAAAATAAAACACGACAGGAAAACACAATCATGAACACAAACAGAAACCACTTGAGAAAATATGGAAGCGCAGCGAAAAAACTAAAAAAAACAAACAAAGGAGACACATGAGCAAAAAACGGAAAATACAAACCTGAACTACGAGGGTCCCACATGAAATTTCAGAAAGTCCGTACACAGTAATTAATCAGTAATTACTGTTCAGTAAATGTGAATAAAATTAACCCAAGGGGTTAATTTTAGAGACACCAATAGGTAAATGGACACCGATACACCAGAGTCCCCAATTGAGACACCGATATATTGGTACCTCGGAGAGAGAAATAAATCCCGGATTCCCAAAATACCCCTATCTCTGTGTCTGGAAGGCGCGTGGTAATGCTTTGAAAAAGGTGACCTTCTCTCTCCAAAAACTCACCGGAACGGCCAAACTGGCTGATTCCGGCGTCAATTTTCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession CAD65754.1
Location 201-557
Gene Name C1
Protein Name C1 protein
Coding Region ATGACGATCAAATATAATAACACCAAGGGGATGGAGTTTACTATAGATGTGAAACTCAAAGACGACAATTCAATTATGGTGCAGATTGCATTGTGCTCAACAAGATCACCAGCCATGGCTAAGAAAACGTTCCTGATCACATACGGCCATGATGGGATCATACCACCTTTCGACTTCAACAATATAGAGGAAGGGATACATAATATGTTGAGGATCATGTACAAGGATTCTCATGTTAGAGAATTTCGACAGGAGGACATGGTAGAGGCTATAGATATACTGATGATGCATGAGGCCCCGGTAGTTGACATACGTATATGGGATGATTATGATGTATGTACGAATGTGTGTGTCTGA
Protein Sequence MTIKYNNTKGMEFTIDVKLKDDNSIMVQIALCSTRSPAMAKKTFLITYGHDGIIPPFDFNNIEEGIHNMLRIMYKDSHVREFRQEDMVEAIDILMMHEAPVVDIRIWDDYDVCTNVCV

References More References in PubMed

1

Association of tomato leaf curl Gujarat virus and tomato leaf curl Bangladesh betasatellite on papaya showing typical leaf curl symptoms in North India.

Varun P, et al.  3 Biotech. 2018 May;8(5):243. doi: 10.1007/s13205-018-1254-7. Epub 2018 May 8.

PMID: 29744275
2

Occurrence of tomato leaf curl Bangladesh virus and associated subviral DNA molecules in papaya in Bangladesh: molecular detection and characterization.

Hamim I, et al.  Arch Virol. 2019 Jun;164(6):1661-1665. doi: 10.1007/s00705-019-04235-8. Epub 2019 Apr 4.

PMID: 30949815
3

Characterization of a new begomovirus and betasatellite associated with chilli leaf curl disease in India.

Khan ZA, et al.  Arch Virol. 2017 Feb;162(2):561-565. doi: 10.1007/s00705-016-3096-0. Epub 2016 Oct 13.

PMID: 27738844
4

Molecular characterization of a new species of Begomovirus and betasatellite causing leaf curl disease of tomato in India.

Kumari P, et al.  Virus Res. 2010 Sep;152(1-2):19-29. doi: 10.1016/j.virusres.2010.05.015. Epub 2010 Jun 9.

PMID: 20540978
5

Complexity of begomovirus and betasatellite populations associated with chilli leaf curl disease in India.

Kumar RV, et al.  J Gen Virol. 2015 Oct;96(10):3143-3158. doi: 10.1099/jgv.0.000254. Epub 2015 Aug 4.

PMID: 26251220
6

Molecular Characterization of a Recombinant Isolate of Tomato Leaf Curl New Delhi Virus Associated with Severe Outbreaks in Zucchini Squash in Southern Italy.

Mastrochirico M, et al.  Plants (Basel). 2023 Jun 21;12(13):2399. doi: 10.3390/plants12132399.

PMID: 37446959
7

A distinct strain of tomato leaf curl New Delhi virus that causes mosaic disease in ash gourd and other cucurbitaceous crops.

Vignesh S, et al.  Front Microbiol. 2023 Oct 26;14:1268333. doi: 10.3389/fmicb.2023.1268333. eCollection 2023.

PMID: 37965544
8

Molecular characterization of Tobacco leaf curl Pusa virus, a new monopartite Begomovirus associated with tobacco leaf curl disease in India.

Singh MK, et al.  Virus Genes. 2011 Oct;43(2):296-306. doi: 10.1007/s11262-011-0631-7. Epub 2011 Jun 11.

PMID: 21667126
9

A novel recombinant tomato-infecting begomovirus capable of transcomplementing heterologous DNA-B components.

Kumari P, et al.  Arch Virol. 2011 May;156(5):769-83. doi: 10.1007/s00705-011-0915-1. Epub 2011 Feb 11.

PMID: 21311922
10

Biology and interactions of two distinct monopartite begomoviruses and betasatellites associated with radish leaf curl disease in India.

Singh AK, et al.  Virol J. 2012 Feb 16;9:43. doi: 10.1186/1743-422X-9-43.

PMID: 22339942