Tomato leaf curl Bangalore betasatellite 2

Basic Information

Abbreviation ToLCuBaB2
Genebank Accession EU280314
Isolate IN-Ban5-07
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGGGGTCTTTGGCGTTTTTAGTGGGTCCCATAATAACAGTGGACTCTTAATGGGCCTTCTGTAGCAAATGGACTTTTAAATGAATTGGGCTTGGACCAGTAGATTCGAGACTGGGCCTATGTATTATAAATAAATAATGTACTCATAAAAAACGGTCATTTATCAGATAGCTATATACATTCACACACACACACATAGTACAAACATCATATCATCAAAACCTGATATCACTACAGGAGCTTCAGTCATGATTAACATATCTATTAGTTCCGTCATGTCCTCATGCTTGAACTCATCAAACATGGTGTCGCGATACATGATAGTCAGTATATTCCTAATCCCCTCTTCTAAATTATTGAAGTCGAAAGGAGGAATAAGTCCATTATGTCCGTATGGAATCACGAATTTCCTCTTCACAAGAGCTGGAGATCTTGTGGATGTTAGCTGAATGTGCACTTTAATAGAATCATCACCTTTCAACCTGACATTGATAATAAACATCAAACCATTCCGATTCACATACTTTATTGTCATATTTGATTTGATTTTGTTAATCTCATTTCATCATTATATAATGATAGGAAAAACAATATATGATTCATAATAACACACGTAGTTCATTCACAACCACATTTCTATATTTCAGTATATATTTGATAGTAACACCACTATCAAATATCGATAAATAAGAAAAGAAACATGAGTGAAGACAATTAGCCCAATAATTGTCTGTAACCAAAAGAATGTACTGTATATATACTCGTATATGTACAGGTTAAAAAAAAGGAAATAAATAACACTACACCTACCAAACATTATTGAGAAAACATGGCCCCGCAGGGGAACTGAAGCCGAACAAGAAACACTGGACTAAAGCATCAGAAACATACGAAATGCATACGTGTGGCTGCACGTGTGAATGAGGATATAGAAAAAAAAAAGAAAAACTAAATAAATCGTTCCGAAAGGACCGATATGCAAATAAGGAAATATAAAAGGTACCGGAATAAAATAATTGGAACTTTCATGGAAATTACAATTATGCCATTTGGTACTCAAGTATATATTGAGTACCATTCATTCGGTACCAATCGGTGTACATGAGAGAGAAATAAAACCCGGATTCCTAAAATACCCTTAATTATGTGTCTGGAAGGCGCGTGGTAGTGCGCTGAAAAAGTTGACCTTCTCTCTCCAAAGTTCATCGGAACTACCAAACTGGCTTATTCCGGTGTCAATTTTCGATTTTCGACACGCGCGCGGTGTGTACCCCTGGGAGGGTAGAAAACCTCTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGTCCACGTTCTAATATT

Gene Information

NCBI Accession ABX74941.1
Location 193-546
Gene Name C1
Protein Name C1 protein
Coding Region ATGACAATAAAGTATGTGAATCGGAATGGTTTGATGTTTATTATCAATGTCAGGTTGAAAGGTGATGATTCTATTAAAGTGCACATTCAGCTAACATCCACAAGATCTCCAGCTCTTGTGAAGAGGAAATTCGTGATTCCATACGGACATAATGGACTTATTCCTCCTTTCGACTTCAATAATTTAGAAGAGGGGATTAGGAATATACTGACTATCATGTATCGCGACACCATGTTTGATGAGTTCAAGCATGAGGACATGACGGAACTAATAGATATGTTAATCATGACTGAAGCTCCTGTAGTGATATCAGGTTTTGATGATATGATGTTTGTACTATGTGTGTGTGTGTGA
Protein Sequence MTIKYVNRNGLMFIINVRLKGDDSIKVHIQLTSTRSPALVKRKFVIPYGHNGLIPPFDFNNLEEGIRNILTIMYRDTMFDEFKHEDMTELIDMLIMTEAPVVISGFDDMMFVLCVCV

References More References in PubMed

1

Characterization of Tomato leaf curl New Delhi virus associated with leaf curl and yellowing disease of Watermelon and development of LAMP assay for its detection.

Venkataravanappa V, et al.  3 Biotech. 2020 Jun;10(6):282. doi: 10.1007/s13205-020-02245-x. Epub 2020 Jun 2.

PMID: 32550101
2

Association of Tomato Leaf Curl New Delhi Virus, Betasatellite, and Alphasatellite with Mosaic Disease of Spine Gourd (Momordica dioica Roxb. Willd) in India.

Venkataravanappa V, et al.  Iran J Biotechnol. 2019 Jan 11;17(1):e2134. doi: 10.21859/ijb.2134. eCollection 2019 Jan.

PMID: 31457044
3

Molecular characterization of novel bipartite begomovirus associated with enation leaf disease of Garden croton (Codiaeum variegatum L.).

Venkataravanappa V, et al.  Virusdisease. 2022 Jun;33(2):194-207. doi: 10.1007/s13337-022-00772-0. Epub 2022 Jul 1.

PMID: 35991698
4

Diversity and phylogeography of begomoviruses and DNA satellites associated with the leaf curl and mosaic disease complex of eggplant.

Venkataravanappa V, et al.  Microb Pathog. 2023 Jul;180:106127. doi: 10.1016/j.micpath.2023.106127. Epub 2023 Apr 28.

PMID: 37119939