Tobacco leaf curl Patna betasatellite


Basic Information

Abbreviation TobLCuPatB
Genebank Accession HQ180394
Isolate IN-Pusa-09
Download Genome |GFF3 |PEP |CDS

Genome

ACCGGGGGCGAGCGGTGTTTTTCGTGTTCGAGGTGGGTCCCACTTTCCACAGAAGAGGAAATGTTGACTGGGTCAATGCAATTGGGCCTCAATTTTATGGGCTTTTGTTATTGGGCTTCGTTATTGGACTCAAAAAAATATTAAAATTAAAATTTTATTAATATCTCATTGAAATACATTTCGTACACGTATTTATACACTTGCATTAGTATACACATCGTACAAGTCGTGTACATTAATATCAACCACTGGGGCTTCGTGCATCATCAGGATATCAATAGTCTCAACCATATCCTCCCGCCGGAATTCCCCAATGGTGGAGTCTTTGTACATGATCTTCAACAGATGACGTATCCCCTCCTCAATACTGTTGAAGTCAAAAGGACCTGTGAACCCATGATGGCCGTATGGGATCAAGAACTTGGCCTTGGCTAGTGCCGGTGACCTTGTTGATATCAGATCCACCTGAACGATGATGGAATTATCGTTCCTCAACCTGACATTGATAGTAAACTCCATTCCCTTCTTATTATTATATTTGATCGTCATTTTATGTGTCTGGGTCTAAACATGAGTGTACCCCTTTAAATAGGGTTCATATATCTAGATATATGGACACAAATCAATTACGTGGTCTTGTCTAGAACACTTGAGTTGTGTGGAGAATGTATGTTTGATAGTGATAATACTATCAAATATCTAAAAAAAGAAAAAGAAAATAAAATCATAATTATAAATAATTATGACTAATAAAAAAAGAAAATAACAAAATCTGATTGATAAAACACTAAACAAACCCTAAACAAACACTATCACAATCACAATATACATTAAAAAAAATAAAAGGGAGCGCAGCGACGAAACAAGCCAGAACTGACAACAACAAAAAAATGTGACAAAAAAAAAATTAAAAAAAAATAAAAATAAAAAACATGAATAATTGGGCCCCACAATTATGAATAGTTAAATCCGTACACACAAGTCATTTACTGTTTTACTGCACGGTAAAATAGTAAATCATATTTACCCCAGGGTAAATATCTGAGTCCCCAATAGGTAAATTTGACCCCGATATATCGGGGACTCAATTGGAGACAGGAAAGAGAAATAATCCCGGATTCCAAAAATACCCTTATCTCTGTCTCTGGAAGGCGCGTGGGAGTGCGCTGCAAAAGTAGACTTTCTCTCTCCTAAAACTCGTCGGAACTCCGATTCTGGCACTTCCGGTCACCAATTTGCGACACGCGCGGCGATGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCCCGTTCTAATATT

Gene Information

NCBI Accession ADO20903.1
Location 193-549
Protein Name C1
Coding Region ATGACGATCAAATATAATAATAAGAAGGGAATGGAGTTTACTATCAATGTCAGGTTGAGGAACGATAATTCCATCATCGTTCAGGTGGATCTGATATCAACAAGGTCACCGGCACTAGCCAAGGCCAAGTTCTTGATCCCATACGGCCATCATGGGTTCACAGGTCCTTTTGACTTCAACAGTATTGAGGAGGGGATACGTCATCTGTTGAAGATCATGTACAAAGACTCCACCATTGGGGAATTCCGGCGGGAGGATATGGTTGAGACTATTGATATCCTGATGATGCACGAAGCCCCAGTGGTTGATATTAATGTACACGACTTGTACGATGTGTATACTAATGCAAGTGTATAA
Protein Sequence MTIKYNNKKGMEFTINVRLRNDNSIIVQVDLISTRSPALAKAKFLIPYGHHGFTGPFDFNSIEEGIRHLLKIMYKDSTIGEFRREDMVETIDILMMHEAPVVDINVHDLYDVYTNASV

References More References in PubMed

1

Two distinct monopartite begomovirus-betasatellite complexes in western India cause tomato leaf curl disease.

Sangeeta, et al.  Virus Res. 2021 Apr 2;295:198319. doi: 10.1016/j.virusres.2021.198319. Epub 2021 Jan 26.

PMID: 33508355

2

Detection and characterization of a new betasatellite: variation in disease symptoms of tomato leaf curl Pakistan virus-India due to associated betasatellite.

Kumar J, et al.  Arch Virol. 2013 Jan;158(1):257-61. doi: 10.1007/s00705-012-1486-5. Epub 2012 Sep 29.

PMID: 23053516

3

Molecular characterization of a new begomovirus infecting Mirabilis jalapa in northern India.

Kulshreshtha A, et al.  Arch Virol. 2017 Jul;162(7):2163-2167. doi: 10.1007/s00705-017-3330-4. Epub 2017 Mar 24.

PMID: 28342034

4

Betasatellite-encoded βC1 protein regulates helper virus accumulation by interfering with the ATP hydrolysis activity of geminivirus-encoded replication initiator protein.

Gnanasekaran P, et al.  J Gen Virol. 2023 Jun;104(6). doi: 10.1099/jgv.0.001866.

PMID: 37326617

5

Geminivirus Betasatellite-Encoded βC1 Protein Exhibits Novel ATP Hydrolysis Activity That Influences Its DNA-Binding Activity and Viral Pathogenesis.

Gnanasekaran P, et al.  J Virol. 2021 Aug 10;95(17):e0047521. doi: 10.1128/JVI.00475-21. Epub 2021 Aug 10.

PMID: 34132576