Tobacco leaf curl Japan betasatellite

Basic Information

Abbreviation TbLCJRB
Genebank Accession AB236324
Isolate JR-Miy-05
Download Genome |GFF3 |PEP |CDS

Genome

ACCGGTGGCGATTTGGTTCCGCGGGGGAAAGGTGGGCCCCACCTTTCTGAATAAGTCTGGGTTATTTGCACATTGGCCCCCTGGATTTATTCATCATCATATTTACACCCTTAAAATGAGATTAACATAATTAAACATCATTTAATTAACACAAATACAATAAAATTAATCATTAATTTTATTTACACGGAGATACGCAATACTTTGCGTATTGTAGTACACGTTCCTCATACGGTGTATTTGTGACGTACAATACACCTTCTCATTGTTTCTACTCCCATATCAGTGAACATCTCTGTCATCAATATGTCAATTGTCTCGATCATATCCTCCACTTGGAAATTGGAGACATCAGAATCCTCATACATTAGCTCAAGGGTGTTTCTGATGATCTCTTCTGTTCCGTTGAAGTCGAATGGTGCAATGATCTGTTCATATGTGTATGGTATGTTGCAGTTGAATCCCGTCAATATTGCTTGATTGGTTGAGTAGACCTGGACTGACACGCTGATGAACTGCTGGAGCCGTACGTCTATGATGAACTTGATCCCGTTGCCGTTGCTGTATGTGATAGTCATTGTGAGTGGTGTGATCTGTGCCTTGGTAGTTATGCCTTGAGGAGTGGTGGTTTGTGGGTTGTGTGTCCCAATTTAGTCCATGTGTTTGTGCTTATATATCTGTGCGAGTGTTGTTTCCTATTAATACAAATATAATTCCTTATATTTGAGGAAACCAAAAAAGAAAGAGAAAAAGAAAAATGATATCAAAGAGAAAAGAAAATTAAATCAAAAAAGAAAAATCACATGCAAGAAGATCAACATCTATTCCGGCCTAAAAGGGAGCGCAGCTCAAGTGTCTTCGAAAAAAATAGAAGAAAACAAGGAAATTAAAGTCAAAGAAAAAAAAATGAAATGAAAAAAGAAATAGAAAAAAAGAAAAAGAAAAATCCTAAATTAAATGAAGCCCAGTTAATTTAGCCCAAACTAAAAATGGAAGCCCATTCTATTTGGCCCACTGAAGAGGAGCCCATCATTAGTTTCTGTCCGTACCAGTTGACTAGTCAATACCCCAATACCCCAATGCCCCCGATACACCAATATATTGGGGGACAAAGGGTTCCATTAAATTGTTGGACAAAAATACCCCCGAAAAGCAGAGAGAGTAGGCGCGTGGGAGTGCTCTGAAAAAGGTTCTTTCTCTCTCCTCAAACCCATCGGAGACGATGATCGGAGGCCTTCCGGTCATCATTTTCCGACACGCGCGGCAGTGCGAACACGGATGTGGGAAAACCACTACGCTACGCAGCAGCCTGAGCTACGCCGGAGCCTAGCATCGCCACCGTATAATATT

Gene Information

NCBI Accession BAF49375.1
Location 228-578
Gene Name betaC1
Protein Name C1 protein
Coding Region ATGACTATCACATACAGCAACGGCAACGGGATCAAGTTCATCATAGACGTACGGCTCCAGCAGTTCATCAGCGTGTCAGTCCAGGTCTACTCAACCAATCAAGCAATATTGACGGGATTCAACTGCAACATACCATACACATATGAACAGATCATTGCACCATTCGACTTCAACGGAACAGAAGAGATCATCAGAAACACCCTTGAGCTAATGTATGAGGATTCTGATGTCTCCAATTTCCAAGTGGAGGATATGATCGAGACAATTGACATATTGATGACAGAGATGTTCACTGATATGGGAGTAGAAACAATGAGAAGGTGTATTGTACGTCACAAATACACCGTATGA
Protein Sequence MTITYSNGNGIKFIIDVRLQQFISVSVQVYSTNQAILTGFNCNIPYTYEQIIAPFDFNGTEEIIRNTLELMYEDSDVSNFQVEDMIETIDILMTEMFTDMGVETMRRCIVRHKYTV

References More References in PubMed

1

Molecular analysis of new isolates of Tomato leaf curl Philippines virus and an associated betasatellite occurring in the Philippines.

Sharma P, et al.  Arch Virol. 2011 Feb;156(2):305-12. doi: 10.1007/s00705-010-0837-3. Epub 2010 Oct 30.

PMID: 21053032
2

Pathogenicity and insect transmission of a begomovirus complex between tomato yellow leaf curl virus and Ageratum yellow vein betasatellite.

Ueda S, et al.  Virus Genes. 2012 Apr;44(2):338-44. doi: 10.1007/s11262-011-0691-8. Epub 2011 Nov 22.

PMID: 22105924
3

Interaction of tomato yellow leaf curl virus with diverse betasatellites enhances symptom severity.

Ito T, et al.  Arch Virol. 2009;154(8):1233-9. doi: 10.1007/s00705-009-0431-8. Epub 2009 Jul 3.

PMID: 19575277
4

Identification of the virulence factors and suppressors of posttranscriptional gene silencing encoded by Ageratum yellow vein virus, a monopartite begomovirus.

Sharma P, et al.  Virus Res. 2010 Apr;149(1):19-27. doi: 10.1016/j.virusres.2009.12.008. Epub 2010 Jan 15.

PMID: 20079777
5

Subcellular localization of V2 protein of Tomato leaf curl Java virus by using green fluorescent protein and yeast hybrid system.

Sharma P, et al.  Protoplasma. 2011 Apr;248(2):281-8. doi: 10.1007/s00709-010-0166-0. Epub 2010 Jun 13.

PMID: 20549267