Tobacco curly shoot betasatellite

Basic Information

Abbreviation	TobCSB
Genebank Accession	AJ421484
Isolate	CN-Yn35-01
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGGTGGCGAGCGGGGTCTTTGGTGCTGATGGTGGGCCCCACATATGAAATTGGGCCTTAAATGGGCCAAAAAAGATTACTGGGTATGCAATTTGGTCTCTTGTTGGGCTCTTTCAATTTGGGTCTACACAGTACTACGTTGATAATATAAATATTTATTTTATTATTTAATACTTATGTTATGCATTACATACGGATTAAAATACGTATTCATACATTAGCTATTGTCCCTATATCATAATCTTCCTCTACGTCTATATCCTCAACAGCCGCTTCTTGCATCATCAGGATATCAATCGTCTGGACCATGTCCTCCTGTTTGAAATCTCGTATTGTGGATTCGTTGTACATTATACGTAATAAATTACGTATTCCTTCCTCTAAGTTATTGAAATTGAATGGTGGTATGATCCCACTATGTCCGTATGGGATGATGTATTTCCTCTTTGCCAGTGCTGGTGATTTTGTTGATATCAATTCAATCTGAACAACGATTGAATTGTCCTCCTTCAACTTAACATCAACGATGAACTCCATGCCCTTCTTGTTGTTGTATTTAATTGTCATATTTGTTCTTGTGACCAAAACGTTAGTTCTGTCCCTTTAAATAATCATTTTCATATGCTATTCATGGTCTGAAATGATTTACGTGTTTCTTGCTTGTTCATATGTTTGGTAGTGGAGATCTTTGTATCGGATGTGACGCTGTTGTTAATGGTGTGGTTAATGTGTAATTAGAATTAAATGTGTAGTTAGACGTTAGTACTAATCATAACATGATTAGGAAAGGAAAAAAGAAAAAAGAAAAAAACTGAAATTAAATACAATAAAACTCATAACATCCATTATCCTAAAATGGGAGCGCAGCGAAACGAAAACCCCAATGACGAACAAGAAAACAAGAAAAAAAAATAAAAACAAAAGAAAAACTCATACACTCAGAACAATAAACCTTGAAGAAATTTCAGTGGACCCCACCTAATTAAAAGAATAAATAAAAAGAATAAAATGATTTACTGCACGGTAAATCAGTAATTAATAATTACTGAGGTGAATGGGTAAAAACATGAGGACCTGATAGGTAAATGAGGACCCGATACATCGGGGACTCAATTGGGGACTATTAATTTACTTTCCCAAAATACCCTTGTCCCTGTGTCTGGTAGGCGCGTGAGAGTGGACTGAAAAAGTAGAGTTTCTCTCTCCTAAAACTCCTCCGACCGCCGATTCAGGCACTTCCGTTCACCAATTTGCGACACGCGCGGCGTTGTGTACCCCTGGGAGGGTAGAAACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCACCGTTATAATATT

Gene Information

NCBI Accession	CAD13345.1
Location	212-568
Gene Name	C1
Protein Name	putative C1 protein
Coding Region	ATGACAATTAAATACAACAACAAGAAGGGCATGGAGTTCATCGTTGATGTTAAGTTGAAGGAGGACAATTCAATCGTTGTTCAGATTGAATTGATATCAACAAAATCACCAGCACTGGCAAAGAGGAAATACATCATCCCATACGGACATAGTGGGATCATACCACCATTCAATTTCAATAACTTAGAGGAAGGAATACGTAATTTATTACGTATAATGTACAACGAATCCACAATACGAGATTTCAAACAGGAGGACATGGTCCAGACGATTGATATCCTGATGATGCAAGAAGCGGCTGTTGAGGATATAGACGTAGAGGAAGATTATGATATAGGGACAATAGCTAATGTATGA
Protein Sequence	MTIKYNNKKGMEFIVDVKLKEDNSIVVQIELISTKSPALAKRKYIIPYGHSGIIPPFNFNNLEEGIRNLLRIMYNESTIRDFKQEDMVQTIDILMMQEAAVEDIDVEEDYDIGTIANV

References More References in PubMed

1	Suppression of nbe-miR1919c-5p Expression in Nicotiana benthamiana Enhances Tobacco Curly Shoot Virus and Its Betasatellite Co-Infection. Du J, et al. Viruses. 2020 Apr 1;12(4):392. doi: 10.3390/v12040392. PMID: 32244650
2	Identification of microRNAs regulated by tobacco curly shoot virus co-infection with its betasatellite in Nicotiana benthamiana. Du J, et al. Virol J. 2019 Nov 7;16(1):130. doi: 10.1186/s12985-019-1234-5. PMID: 31699111
3	Ethylene response transcription factor 5 (ERF5) enhances defense against tobacco curly shoot virus and associated betasatellite (TbCSV/TbCSB) in Nicotiana benthamiana. Zhao M, et al. Virology. 2025 Feb;603:110309. doi: 10.1016/j.virol.2024.110309. Epub 2024 Nov 29. PMID: 39673969
4	Transcriptome analysis of Nicotiana benthamiana infected by Tobacco curly shoot virus. Li K, et al. Virol J. 2018 Sep 3;15(1):138. doi: 10.1186/s12985-018-1044-1. PMID: 30176884
5	Characterization of Pathogenicity-Associated V2 Protein of Tobacco Curly Shoot Virus. Li M, et al. Int J Mol Sci. 2021 Jan 18;22(2):923. doi: 10.3390/ijms22020923. PMID: 33477652
6	A recombinant Tobacco curly shoot virus causes leaf curl disease in tomato in a north-eastern state of India and has potentiality to trans-replicate a non-cognate betasatellite. Shilpi S, et al. Virus Genes. 2015 Feb;50(1):87-96. doi: 10.1007/s11262-014-1141-1. Epub 2014 Nov 20. PMID: 25410052
7	Iterons Homologous to Helper Geminiviruses Are Essential for Efficient Replication of Betasatellites. Xu X, et al. J Virol. 2019 Feb 19;93(5):e01532-18. doi: 10.1128/JVI.01532-18. Print 2019 Mar 1. PMID: 30541843
8	Temporal Dynamic of the Ratio between Monopartite Begomoviruses and Their Associated Betasatellites in Plants, and Its Modulation by the Viral Gene betaC1. Wu YJ, et al. Viruses. 2023 Apr 13;15(4):954. doi: 10.3390/v15040954. PMID: 37112934
9	First Report of Tobacco curly shoot virus Infecting Pepper in China. Qing L, et al. Plant Dis. 2010 May;94(5):637. doi: 10.1094/PDIS-94-5-0637A. PMID: 30754455
10	Cryo-EM Structure of a Begomovirus Geminate Particle. Xu X, et al. Int J Mol Sci. 2019 Apr 8;20(7):1738. doi: 10.3390/ijms20071738. PMID: 30965627