Rose leaf curl betasatellite

Basic Information

Abbreviation RoLCuB
Genebank Accession GQ478344
Isolate PK-Fai-06
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGGTGCCTCCGGGGACGCAGTGGGTCCCACATGTTAGATCTGCAGAATTAATGGGCTGTTAAACGTTATTGGGCCTATTTGTATTGGGCTTTTATCATATATTTAAATTGGGCTTCGTATATTAGAGAATATGATCACAAAACAGTTTTATGTATTATTTTTATAAATACGCATTTATACGGATGTATGCGTAAACACATCGTATGCATCCATTACATTAATGTCTATTACAGGAGCCTCTTCCATCATGAGCATATCAATTCCCTCCACCATGTCTTCTTGCTTGAATTCCCCTATAGTAGACTCCTTGTACATGAGTGCTAACATGTTGTGTATCCCTTCTTCCAGATTATTGAAGTTGAATGGCGGTATGATTCCACTGTGCCCGTATGGAATCATGAACTTCTTCGTTGTCAGTGCTGGAGATCCTGTTGAGAATAGCTGTATTTGAACCAGAATGGAGTTATCTTCGTTCAATCGGACGTCTATGGTGAATTTCATCCCCTTCTGGTTATTGTATTTGATCGTCATTTTGTTGTGTGAGTGTTCATGACATATGAACACCCATTAAATAGAACCAAAAGTTGTGATATATGGTTATTATTGATATACGTGGTTTGGTTATGTTCATATATTTTATAGTGGAGATATTTGTTATGGATGTTGACGTTGATATTAATTGTTTTTGTAATATGGAGTTCTAATGAATCATAATTATGAAATAATTAGGAAGAAAAAAATATAAAAGAAGAAAAAAGATAAGAAAATGAAAAAATATAGAAAACCCCTAACCCTGAATTCTATTCTTTGAAAATGGTCGCGCAGCGAAACAGGAAACCGAAACTAACAATAAATGAAAACAAAATGGAAAAAGGAAAAAGAAAAGCAATAACAAATCAAACATGAGCAGAGAAAAATAAAAACAAGAAATATCAGTGGTTCCCACTGAAAAAATAAAAAGAAAATAAAAAAGAAAATACAACTGTTTTTACTGAGTCATAAATCAGTAATTGAATAATTACTGAAGTGAATGGGTAAATATAGAAAGGTAACTTAGTCACCAATAGGTAAATTGATCACCGATATATCGGTGACCAATTGGTAATCAATAATAGTGGTTCCCCAAAATACCCCCGCTTTTGTGTGTAATAGGCGCGTCGGAGTGCGCTGATAAAGTTAACATTCTCTCTCCTAAAATGAGACCTAATACAATTTCCCGGTGATCGGAGTCGAATTTCCGACACGCGCGGCGGTGGACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGCTTTAATATT

Gene Information

NCBI Accession ADM32426.1
Location 187-543
Protein Name betaC1
Coding Region ATGACGATCAAATACAATAACCAGAAGGGGATGAAATTCACCATAGACGTCCGATTGAACGAAGATAACTCCATTCTGGTTCAAATACAGCTATTCTCAACAGGATCTCCAGCACTGACAACGAAGAAGTTCATGATTCCATACGGGCACAGTGGAATCATACCGCCATTCAACTTCAATAATCTGGAAGAAGGGATACACAACATGTTAGCACTCATGTACAAGGAGTCTACTATAGGGGAATTCAAGCAAGAAGACATGGTGGAGGGAATTGATATGCTCATGATGGAAGAGGCTCCTGTAATAGACATTAATGTAATGGATGCATACGATGTGTTTACGCATACATCCGTATAA
Protein Sequence MTIKYNNQKGMKFTIDVRLNEDNSILVQIQLFSTGSPALTTKKFMIPYGHSGIIPPFNFNNLEEGIHNMLALMYKESTIGEFKQEDMVEGIDMLMMEEAPVIDINVMDAYDVFTHTSV

References More References in PubMed

1

Characterization, phylogeny and recombination analysis of Pedilanthus leaf curl virus-Petunia isolate and its associated betasatellite.

Shakir S, et al.  Virol J. 2018 Aug 31;15(1):134. doi: 10.1186/s12985-018-1047-y.

PMID: 30165872
2

A betasatellite-dependent begomovirus infects ornamental rose: characterization of begomovirus infecting rose in Pakistan.

Khatri S, et al.  Virus Genes. 2014 Aug;49(1):124-31. doi: 10.1007/s11262-014-1076-6. Epub 2014 Apr 30.

PMID: 24781196
3

Characterization of a New Monopartite Begomovirus with a Betasatellite Associated with Leaf Curl, Yellow Vein, and Vein Enation in Hibiscus rosa-sinensis.

Huang CH, et al.  Plant Dis. 2020 May;104(5):1318-1327. doi: 10.1094/PDIS-06-19-1223-RE. Epub 2020 Mar 16.

PMID: 32181724
4

High genetic homogeneity points to a single introduction event responsible for invasion of Cotton leaf curl Multan virus and its associated betasatellite into China.

Du Z, et al.  Virol J. 2015 Oct 7;12:163. doi: 10.1186/s12985-015-0397-y.

PMID: 26445958
5

Comparative taxonomical, biological and pharmacological potential of healthy and geminivirus infected leaves of Hibiscus rosa-sinensis L.: First report.

Shaheen S, et al.  Microb Pathog. 2023 Dec;185:106428. doi: 10.1016/j.micpath.2023.106428. Epub 2023 Nov 15.

PMID: 37977480
6

Unveiling Lathyrus aphaca L. as a Newly Identified Host for Begomovirus Infection: A Comprehensive Study.

Bahar T, et al.  Genes (Basel). 2023 Jun 3;14(6):1221. doi: 10.3390/genes14061221.

PMID: 37372401