Ageratum yellow vein Sri Lanka betasatellite

Basic Information

Abbreviation AYVSLB
Genebank Accession AJ542498
Isolate SL-Ag-03
Download Genome |GFF3 |PEP |CDS

Genome

ACCGGGGGCGAGCGGGGTTTTTGGTGTCCATGTGGGTCCCACTTTAAAGAAAGTCTGTAATTGGGCCTTTTTTGCTATTGGGCCTTCATATGAAGTTGGGCTAAATAATAATTCTTTGATTTGGGCTTTGAAAATTATAAGACCAGAAATAAATATTTATTCATTATATATAAAAATACGTATTGAAAATACGTATTTATACAGATACATTACTATACACTTCGTATTCATCGGCTACATTAATATCTATCACTGGAGCCTCTTGCATCATGAGAATATCAACAATTTCTATCATGTCTTCTTGCTTGAATTCTCCGATGGTGGTCTCTTTGTACATGATTTTTATTATGTTGATGATTCCCTCCTCTAGGCTGTTGAAGTCGAAAGGTGGTATGATTCCTGCGTGGCCATACGGAATCATGAATGTCTTCTTTGCTAATGATGCTGACTGTGTTGAGAGTACCTGTATTTGAACTGAGATTTTATCTTCTTGCACGAGCTTTACATCTACTATGAATTCCATGCCTTTCTTGTTGTTGTACTTGATAGTCATTGTTGCATGCTCTTCTAACTATGTCCTGTGATATCTTAAATAGTTGAGATATTTAATGTATGTGGAGATTAATTATTTACGTGTTTTAATGTCATTCATATAATATAAAGTATTCATTATTATGATTGATGGTGACTATTCATATTTATGATTTGGAAAGATAACAATCCTAATCATGAACGTGATTAGGATTAGAAAGAACTCCGAAGGAGAACTTGAGTAAAATTGAAGAGGAAAACAAAAAAACAAAAAAAAAGAACAAAGAAACTAAAAATATAAAACACACACTACTATACATATGAATAAATAGGCCGCGCAGCGGCACGAAACAAAAAAAAGACGGACTAGAAAGACTGATGAAATCATGAAAAGAATAAAGAAAATAAAAAAAGAAGAAAAAAAATGAATAAATATGAAGATATTTATGAGCCTGGTTGATTATTATGATAAATTATGTTTTTACCATTTTACTGCACGGTAAAATGGTAAATGAGTTAACTCATCAAGGTAAATGAGACACCGATAGGTAAATGAGACACCGATATATCGGTACCCCAATTGGTATCCCTTATTTCACTTTCCCAAAATACCCCTGTCTCTGTGTCTGTTAGGCGCGTGCAATTGCTCTGAAAAAGTTATCTTTCTCTCTCCTAAAACCCGTCGGAACTCCGATTCAGGCACTTCCGGTCATCAATTCACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCCCGTTCTAATATT

Gene Information

NCBI Accession CAD65761.1
Location 197-553
Gene Name C1
Protein Name C1 protein
Coding Region ATGACTATCAAGTACAACAACAAGAAAGGCATGGAATTCATAGTAGATGTAAAGCTCGTGCAAGAAGATAAAATCTCAGTTCAAATACAGGTACTCTCAACACAGTCAGCATCATTAGCAAAGAAGACATTCATGATTCCGTATGGCCACGCAGGAATCATACCACCTTTCGACTTCAACAGCCTAGAGGAGGGAATCATCAACATAATAAAAATCATGTACAAAGAGACCACCATCGGAGAATTCAAGCAAGAAGACATGATAGAAATTGTTGATATTCTCATGATGCAAGAGGCTCCAGTGATAGATATTAATGTAGCCGATGAATACGAAGTGTATAGTAATGTATCTGTATAA
Protein Sequence MTIKYNNKKGMEFIVDVKLVQEDKISVQIQVLSTQSASLAKKTFMIPYGHAGIIPPFDFNSLEEGIINIIKIMYKETTIGEFKQEDMIEIVDILMMQEAPVIDINVADEYEVYSNVSV

References More References in PubMed

1

Molecular characterization of a new begomovirus infecting Synedrella nodiflora in South India.

Das S, et al.  Arch Virol. 2018 Sep;163(9):2551-2554. doi: 10.1007/s00705-018-3861-3. Epub 2018 May 9.

PMID: 29744588
2

Diversity and phylogeography of begomoviruses and DNA satellites associated with the leaf curl and mosaic disease complex of eggplant.

Venkataravanappa V, et al.  Microb Pathog. 2023 Jul;180:106127. doi: 10.1016/j.micpath.2023.106127. Epub 2023 Apr 28.

PMID: 37119939