Papaya leaf curl India betasatellite 2

Basic Information

Abbreviation	PaLCINB2
Genebank Accession	MN529627
Isolate	IN-MM1B-19
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGTGGGCGAGCGAAGACCGGTGGCTTCTTAGTGGGTCCCACGTTGAAGGAGAAAGATAACTGGGCCTGATCTATGAAATTGGGCCTGTATTGAAATGGGCTTGGACCAGTTATTTCGCGACTGGGCCAATACAATAAGATAAGAAATGGGTTCGTAAATTAAAACAAAGGATTTATTCATTTCAAATGCATTACACACTCACACACACACTTTCGTACATACATCGTATTCATCTCCTATACGTATATCAACTAATGGAGCTTCTTCCATCATGAGTAAATCAATTGTCTCCACCATATCCTCTTGTCGAAACTCTTCTATATCAGAATCCTTGTACATGATTTGCAACAGATTTTGTATACCTTCCTCTAGAGCGTTGAAGTCGAACGGAGGTATGATCCCATCATGGCGGTATGGGATCATGAAGGTCTTCTTTGCCAGGGCTGGTGATTGTGTTGAGAACAATTCAATCTGTACTAAGATTGAATTGTCTTCGTTGATTTTCACGTCGATGGTAAACTCCATCCCCCTCTTGTTAATTTATTTGATCGTCATTCATGTATTTGTGAAATATACGTCATTTTAGATGTGCAATAACTAAAAATAAATCAATTTATATGAAGATTATACATAAAAGTATGGACATAAATGAAATACGAATTGTAGTGGAGTTAAGATGTTTGATAGTGACAAAACTATCATTTATGTGTTTTATATTTAAAAAAACCATAATGGAAATTAAAGCCATAAATAGGTAATTAGAAGGGGTGTTTTTCCTCTCCGGCAAAAGGAAAAAACGGAAAAAAAAATAAAAAAAAATTGAATTAATAAACTCCTTCATGGAAAGAAAAGACAAACATCAGGACAAACATAAATCTGTTGAAAAAATTTGGGAGCGCAGAAAAAAAACAACGAAATTAAAACGTAAACACGGTTTTGATGAGTGAAAACGGAAAAGAAAAAAGAAAATATTAAAAAAATATTGTAAAATTAAGACAATCCGTACACAGTTGTTCGTGTGTAATTACTGCGTAGTAAATGTGAAAAGAATTTACCAATGGTAAATATATGAGCCCCCAATAGGTAAATGTGACCCCGATTGAGCCCCCAATATATTGGGGGCTCGGAAAGAGAAATAAATCCCGTGATTCCCAAAATACCCCTATCTCTGTGTCTGGTAGGCGCGTGTGAGTGGACTGAAAAAGGTGACATTCTCTCTCCTAAAACTCGTCTGATCTCCGATTCAGGCTGACTCCGGCATCAATTTACGACACGCGCGGCGTTGTGTACCCCTGGGAGGGTAGAAACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession	QID21123.1
Location	201-527
Gene Name	C1
Protein Name	beta C1
Coding Region	ATGGAGTTTACCATCGACGTGAAAATCAACGAAGACAATTCAATCTTAGTACAGATTGAATTGTTCTCAACACAATCACCAGCCCTGGCAAAGAAGACCTTCATGATCCCATACCGCCATGATGGGATCATACCTCCGTTCGACTTCAACGCTCTAGAGGAAGGTATACAAAATCTGTTGCAAATCATGTACAAGGATTCTGATATAGAAGAGTTTCGACAAGAGGATATGGTGGAGACAATTGATTTACTCATGATGGAAGAAGCTCCATTAGTTGATATACGTATAGGAGATGAATACGATGTATGTACGAAAGTGTGTGTGTGA
Protein Sequence	MEFTIDVKINEDNSILVQIELFSTQSPALAKKTFMIPYRHDGIIPPFDFNALEEGIQNLLQIMYKDSDIEEFRQEDMVETIDLLMMEEAPLVDIRIGDEYDVCTKVCV

References More References in PubMed

1	In silico identification of papaya genome-encoded microRNAs to target begomovirus genes in papaya leaf curl disease. Srivastava A, et al. Front Microbiol. 2024 Mar 21;15:1340275. doi: 10.3389/fmicb.2024.1340275. eCollection 2024. PMID: 38605706
2	Biology and interactions of two distinct monopartite begomoviruses and betasatellites associated with radish leaf curl disease in India. Singh AK, et al. Virol J. 2012 Feb 16;9:43. doi: 10.1186/1743-422X-9-43. PMID: 22339942
3	Molecular characterization of novel bipartite begomovirus associated with enation leaf disease of Garden croton (Codiaeum variegatum L.). Venkataravanappa V, et al. Virusdisease. 2022 Jun;33(2):194-207. doi: 10.1007/s13337-022-00772-0. Epub 2022 Jul 1. PMID: 35991698
4	A new variant of Croton yellow vein mosaic virus naturally infecting wild sunflower in India. Sharma R, et al. Virusdisease. 2018 Dec;29(4):513-519. doi: 10.1007/s13337-018-0495-8. Epub 2018 Nov 15. PMID: 30539055