Papaya leaf curl India betasatellite


Basic Information

Abbreviation PaLCuINA
Genebank Accession HM143906
Isolate India-Panipat-08
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGATTTTTTTCCGGCCTCTGCGGGTCCCACACACAGTCAATGGGTCAACTGGACCTTGCTTTTGTAATGGACCAGTAGATTCGTAACTGGGCCTAATGCTTGTTTGCGGCCCAAAACGACAAATTGAAAAATTGGGCCTAATTGGACTCATAACTAAAATAGTTCTTTTATCCATTAATATTTGGAATACATTCAGACAGTGACATTGTTTGAAACATCATATGCTACGTCCAGGTTGATGTTTTCAACGTTGGCCTCTTGCATCATCAGAAGATCTACCATTTCGACCAATTCCTCGTGCTTGACCTTCGCGTACGTTGCGTCCTTGTACAGCAGGTCTATCATTCCCTGTATCCCTTCTTCTAAGCCGTTGAAGTCGAATGGCGCAATGATCCCATCGTGCCCGTATGGTATTTTGAACTTCCTCTTGATAAGTGCCGGAGCTCTGGTGGAGAAGAACTCTATCTCAACCATCACAAACTTCGTCCCGTGCAACCTGACCTTGATGATGAATCTCAGACCATTCGAGTTCGTGTAACGGATTGTCATCTTTGTATGCACATGAGTCTATATTGAGACCCAATATACAGGGGAGAGTTGCAAGAGCGGTCAATTGGGTCCTCAATTTAGTCAACATGCCGGTGACATAACCATCAAAGCATGGAAAGAAAAAAAATGAAAATGAAGAAACGTTGATCATGGAGATGATGAACGTGAGAGAAAAAAAAGAAAAAAAAAGGAATAAATACACAGCAAGACTTGAGAAGGACGTCCCTCCAAAAAAACTAGGTAGCGCAGCGGCCAAAAACAACAAACCACTCAACAAGGAAATCTACAACAATCAAACCAAAAAGGAACCCTAAACCCCAAAATTCTCACTTTATATGCCCGTACTTGAAAACGTCGTCGTTTGAGAAGTAATAAAAGAAAAGAAAATAAAAACCTCATCTACATCTACATTTATTGAATTTCGACATGTGTTTACCATTTACCGCGCAGTAAATGGTAATTAGGTTAATTTGTTGGTTAAAAATAGAGGACCTGATAGGTAAATGAGGACCCAATATATCGGGGATCAATTGGGTCTCATATATTGACATTTTCCCAAACTACCCCCGCTTTTATCAGTAACAGGCGCGTCGGAGTGCGGTGTTAAAGTTAACATTCTCTCTCCCCATTTGGCCGGAGATGGCGTAACTGGCGTTTCCCGGCATCATTTTGCGACACGCGCGGCGGTGCGTACCCCTGGGAGGGTAGAAACCTCTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGCTCTAATATT

Gene Information

NCBI Accession ADO95332.1
Location 205-561
Protein Name C1 protein
Coding Region ATGACAATCCGTTACACGAACTCGAATGGTCTGAGATTCATCATCAAGGTCAGGTTGCACGGGACGAAGTTTGTGATGGTTGAGATAGAGTTCTTCTCCACCAGAGCTCCGGCACTTATCAAGAGGAAGTTCAAAATACCATACGGGCACGATGGGATCATTGCGCCATTCGACTTCAACGGCTTAGAAGAAGGGATACAGGGAATGATAGACCTGCTGTACAAGGACGCAACGTACGCGAAGGTCAAGCACGAGGAATTGGTCGAAATGGTAGATCTTCTGATGATGCAAGAGGCCAACGTTGAAAACATCAACCTGGACGTAGCATATGATGTTTCAAACAATGTCACTGTCTGA
Protein Sequence MTIRYTNSNGLRFIIKVRLHGTKFVMVEIEFFSTRAPALIKRKFKIPYGHDGIIAPFDFNGLEEGIQGMIDLLYKDATYAKVKHEELVEMVDLLMMQEANVENINLDVAYDVSNNVTV

References More References in PubMed

1

Association of tomato leaf curl Gujarat virus and tomato leaf curl Bangladesh betasatellite on papaya showing typical leaf curl symptoms in North India.

Varun P, et al.  3 Biotech. 2018 May;8(5):243. doi: 10.1007/s13205-018-1254-7. Epub 2018 May 8.

PMID: 29744275

2

Characterization, phylogeny and recombination analysis of Pedilanthus leaf curl virus-Petunia isolate and its associated betasatellite.

Shakir S, et al.  Virol J. 2018 Aug 31;15(1):134. doi: 10.1186/s12985-018-1047-y.

PMID: 30165872

3

Natural association of two different betasatellites with Sweet potato leaf curl virus in wild morning glory (Ipomoea purpurea) in India.

Swapna Geetanjali A, et al.  Virus Genes. 2013 Aug;47(1):184-8. doi: 10.1007/s11262-013-0901-7. Epub 2013 Mar 26.

PMID: 23529301

4

Biology and interactions of two distinct monopartite begomoviruses and betasatellites associated with radish leaf curl disease in India.

Singh AK, et al.  Virol J. 2012 Feb 16;9:43. doi: 10.1186/1743-422X-9-43.

PMID: 22339942

5

Molecular Characterization of a Begomovirus, α-Satellite, and β-Satellite Associated with Leaf Curl Disease of Parthenium hysterophorus in India.

Kumar S, et al.  Plant Dis. 2016 Nov;100(11):2299-2305. doi: 10.1094/PDIS-09-15-0982-RE. Epub 2016 Aug 30.

PMID: 30682918

6

Evolutionary Dynamics of Begomoviruses and Its Satellites Infecting Papaya in India.

Srivastava A, et al.  Front Microbiol. 2022 May 12;13:879413. doi: 10.3389/fmicb.2022.879413. eCollection 2022.

PMID: 35685936

7

Senna leaf curl virus: a novel begomovirus identified in Senna occidentalis.

Kumar J, et al.  Arch Virol. 2016 Sep;161(9):2609-12. doi: 10.1007/s00705-016-2931-7. Epub 2016 Jun 17.

PMID: 27314944

8

Characterization of betasatellite associated with the yellow mosaic disease of grain legumes in Southern India.

Satya VK, et al.  Acta Virol. 2013;57(4):405-14. doi: 10.4149/av_2013_04_405.

PMID: 24294953

9

Molecular characterization of novel bipartite begomovirus associated with enation leaf disease of Garden croton (Codiaeum variegatum L.).

Venkataravanappa V, et al.  Virusdisease. 2022 Jun;33(2):194-207. doi: 10.1007/s13337-022-00772-0. Epub 2022 Jul 1.

PMID: 35991698

10

A new variant of Croton yellow vein mosaic virus naturally infecting wild sunflower in India.

Sharma R, et al.  Virusdisease. 2018 Dec;29(4):513-519. doi: 10.1007/s13337-018-0495-8. Epub 2018 Nov 15.

PMID: 30539055