Papaya leaf curl betasatellite

Basic Information

Abbreviation PaLCuB
Genebank Accession AY244706
Isolate IN-ND-03
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGGATTTTTTTGCGTCGTTGTGGGTCCCACCTGATAGATCTGCAGAATTAATGGGCCTTCTGTAGCAATTGGGCCTTAAAAAGAATTGGGCTTGGACCAATAGATTTGATATTGTGCTTATAAATAAAAGTACAAATTGGTCTTTGTAACAAAACGAACATTTTATTCATTTGAAATCAATTACACACTCACGCAGATACATTAGTACATACACCATATTCATCAAATATCTGAATATCAAATACTGGAGCTTCGTGCATCATTAATATATCAATTATCTCCGTCATGTCTTCCTGCCTGAACTCATCAAACGATGAGTCCCTATACATGATAGCCAAGATATTCCTAATCCCCTCTTCCAAATTATTGAAGTCGAAAGGAGGTATAATCCCATCATGCTTGTATGGAAGCATGAATTTCTTCTTCACAAGAGCTGGAGATCTTGTGGATGTTAGCTGAATGTAAACCTTAATAGATTCATCACCTCTCAATGTGACATTAATAACAAACACCAAACCCTTTTGATTAACGTATTTGATCGTCATATTGTTTATGAATGTTCTGAATTCATATGATCATTATATACTGAAAGGAAAATCAATATATGATCCATAACAACACACGTATTTCACTAATAACCACATGACTAGATTTCCATATATATTTGATAGTGACACCACTATCAAATACCTATAAAAAGAAAAGAAACATGAGTGGAGATAATTATCTCAATAATTATTGTAACTGAAAATAATGTACTGTACATATACATGTATATGTACATGATAAGAAATAAAAAGAAAAAAGAAATAATAAACATCACACATAATCAAATAATCTTGAGAAAATATGGCCCCGCAGGGGAACTGAAACAAAAAAAAAAACTGGCTAGAAACGTGAGAAAAAACGAAATTAAAACGTCACGGTTTTGATGAGTGAAAAAGAAAAAGAGAAAATATTAAAAAAATAAATTAAACGACAACGTATCAAGTTGTTCGTGTGGTTTTACCATTTACTGCGCAGTAAATGGTAAGTAGGTAAATAGGTAGGTTAAAAAATGAGACCTCGATGGGTAAATGAGACCCCAATATATCGGGGACTCAATCGGGGTCAGGAGAGAGAAATAATATCCCTTTCCCAAAATACCCCTAAGTCTGTGTCTGGAAGGCGCGTGGGAGTGCGCTGAAAAAGGTGACCTTCTCTCACCAAAAACCCACCGGGACGGCCAAACTGGCTGATTCCGGCATCAATTCACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession AAO85384.1
Location 201-557
Gene Name C4
Protein Name C4 protein
Coding Region ATGACGATCAAATACGTTAATCAAAAGGGTTTGGTGTTTGTTATTAATGTCACATTGAGAGGTGATGAATCTATTAAGGTTTACATTCAGCTAACATCCACAAGATCTCCAGCTCTTGTGAAGAAGAAATTCATGCTTCCATACAAGCATGATGGGATTATACCTCCTTTCGACTTCAATAATTTGGAAGAGGGGATTAGGAATATCTTGGCTATCATGTATAGGGACTCATCGTTTGATGAGTTCAGGCAGGAAGACATGACGGAGATAATTGATATATTAATGATGCACGAAGCTCCAGTATTTGATATTCAGATATTTGATGAATATGGTGTATGTACTAATGTATCTGCGTGA
Protein Sequence MTIKYVNQKGLVFVINVTLRGDESIKVYIQLTSTRSPALVKKKFMLPYKHDGIIPPFDFNNLEEGIRNILAIMYRDSSFDEFRQEDMTEIIDILMMHEAPVFDIQIFDEYGVCTNVSA

References More References in PubMed

1

Identification and molecular characterization of cotton leaf curl Gezira betasatellite and two distinct begomoviruses infecting papaya trees in the Kingdom of Saudi Arabia.

Hussain K, et al.  Cell Mol Biol (Noisy-le-grand). 2022 Sep 30;68(9):129-134. doi: 10.14715/cmb/2022.68.9.20.

PMID: 36905263
2

Codiaeum variegatum in Pakistan harbours pedilanthus leaf curl virus and papaya leaf curl virus as well as a newly identified betasatellite.

Akram A, et al.  Arch Virol. 2020 Aug;165(8):1877-1881. doi: 10.1007/s00705-020-04633-3. Epub 2020 May 23.

PMID: 32447620
3

Association of tomato leaf curl Gujarat virus and tomato leaf curl Bangladesh betasatellite on papaya showing typical leaf curl symptoms in North India.

Varun P, et al.  3 Biotech. 2018 May;8(5):243. doi: 10.1007/s13205-018-1254-7. Epub 2018 May 8.

PMID: 29744275
4

First Report of Tomato leaf curl Albatinah virus (ToLCABV) and its Associated Betasatellite Infecting Papaya in Oman.

Ammara UE, et al.  Plant Dis. 2015 Mar;99(3):421. doi: 10.1094/PDIS-09-14-0912-PDN.

PMID: 30699712
5

Characterization, phylogeny and recombination analysis of Pedilanthus leaf curl virus-Petunia isolate and its associated betasatellite.

Shakir S, et al.  Virol J. 2018 Aug 31;15(1):134. doi: 10.1186/s12985-018-1047-y.

PMID: 30165872
6

Chili leaf curl betasatellite is associated with a distinct recombinant begomovirus, Pepper leaf curl Lahore virus, in Capsicum in Pakistan.

Tahir M, et al.  Virus Res. 2010 Apr;149(1):109-14. doi: 10.1016/j.virusres.2009.12.007. Epub 2010 Jan 15.

PMID: 20079779
7

Senna leaf curl virus: a novel begomovirus identified in Senna occidentalis.

Kumar J, et al.  Arch Virol. 2016 Sep;161(9):2609-12. doi: 10.1007/s00705-016-2931-7. Epub 2016 Jun 17.

PMID: 27314944
8

Occurrence of tomato leaf curl Bangladesh virus and associated subviral DNA molecules in papaya in Bangladesh: molecular detection and characterization.

Hamim I, et al.  Arch Virol. 2019 Jun;164(6):1661-1665. doi: 10.1007/s00705-019-04235-8. Epub 2019 Apr 4.

PMID: 30949815
9

Molecular identification of tobacco leaf curl disease in Sichuan province of China.

Jing C, et al.  Virol J. 2016 Jan 6;13:4. doi: 10.1186/s12985-015-0461-7.

PMID: 26738931
10

Biology and interactions of two distinct monopartite begomoviruses and betasatellites associated with radish leaf curl disease in India.

Singh AK, et al.  Virol J. 2012 Feb 16;9:43. doi: 10.1186/1743-422X-9-43.

PMID: 22339942