Okra leaf curl Oman betasatellite

Basic Information

Abbreviation OLCuOMB
Genebank Accession KF267444
Isolate OM-Barka-12
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGGTGCCTGGCCTGTAATTGGTGGGTCCCACTAGAAGAAGAAATTGGGATGGAGTCGACAGACGACCCATTACCCGATGAGGTTATGGGCCGTAATCATGGAGGCTCATAACTTGGTCTTTAATGGTCGGATCAAAATAAAATAGTTTTATTCATTACTCATTTAAAATTAATCCCCAACATTAAACAAATAATATATAAAATATTATTCATTATATATAATTTAAAACATTACACTGATGATTTATTTATTATGCGGTAATGATTGAAGAGGTCCATGCCTAAAACGTTCGCGTTCTCAGCCATCACCATATCCACCACGTCGACTAATTCCTCCGTCTTGATCATCTGGTGAGTGGAGTCTTTGAACATATTCCTTAACCCATGCATTATCTCCTCCTCGGATCCGTTAAAGTCGAATGGGATGATGATATCAGCGAAATGGTATGGTATGAAAAACGTTGATTTCCTCAGATATGATTCCTTTGTTGCCGTTACCTCTATCCTGCAGTCTATATGATCTTGTTTGAGGAAGACATCGACTCTGAATTGGACTCCCTTGGTGTTCCTGAATGTGATAGTCATCTTGTAATATGTTTCGTGTTGATCATCAACGGGAAATATATAGATGATTCATAAGAAATATCTCATGAGTATATGGATTTAAATTGAACACGTATATCTCGTATTATCCACACATATTCCCTCATCCACTACGTTAGATAGGCTCATACGATGTAAAGCATCGTAAGAGATAAAAAAAAAATAAAAGAAAAAAATAAMCAAGAAATAATTATAATTTAGAAAGAAACAAGGGAGCGCAGCGAAAAAAAAACCCTGAACAGAGAGAGAAAATTAAATAGAAAAAGGAAACCGTACAAGTTCTTCCCAGAAGGACTTGGTTGAAAAAAAAAAAAACACATTAATTCCGTACTATCATACTACGTCGTTTTTGAATTCCGTACTTAAAACACTGTTTAAAACGGTAGACTGAATCTCATGACTAATCCCGTTCCGTTATTTCTTTATCCGTTCCGTTATTTGGACACCAATCCGTTATTGAGCACCGATATATCGGTGCCTCAATCGGTCCCTATCCGTACTCATATACATGTCTTTTACGAAATTACCCTTAAAAAGCTGAGATAAGAGGCGCGTGCTATTGCGCCTGAAAAGTTAACCTTCTCTCTCCTCCGATACCTCTAAACTCCAATTCCGACTGATTCCGGCATCAATTCACGACACGCGGCGGCGGTGTGTACCCCTGGGAGGGTAGAAACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession AHZ59640.1
Location 243-596
Protein Name betaC1 protein
Coding Region ATGACTATCACATTCAGGAACACCAAGGGAGTCCAATTCAGAGTCGATGTCTTCCTCAAACAAGATCATATAGACTGCAGGATAGAGGTAACGGCAACAAAGGAATCATATCTGAGGAAATCAACGTTTTTCATACCATACCATTTCGCTGATATCATCATCCCATTCGACTTTAACGGATCCGAGGAGGAGATAATGCATGGGTTAAGGAATATGTTCAAAGACTCCACTCACCAGATGATCAAGACGGAGGAATTAGTCGACGTGGTGGATATGGTGATGGCTGAGAACGCGAACGTTTTAGGCATGGACCTCTTCAATCATTACCGCATAATAAATAAATCATCAGTGTAA
Protein Sequence MTITFRNTKGVQFRVDVFLKQDHIDCRIEVTATKESYLRKSTFFIPYHFADIIIPFDFNGSEEEIMHGLRNMFKDSTHQMIKTEELVDVVDMVMAENANVLGMDLFNHYRIINKSSV

References More References in PubMed

1

Identification of a disease complex involving a novel monopartite begomovirus with beta- and alphasatellites associated with okra leaf curl disease in Oman.

Akhtar S, et al.  Arch Virol. 2014 May;159(5):1199-205. doi: 10.1007/s00705-013-1926-x. Epub 2013 Nov 28.

PMID: 24287711
2

Genetic diversity of begomoviruses infecting tomato plant in Saudi Arabia.

Sohrab SS.  Saudi J Biol Sci. 2020 Jan;27(1):222-228. doi: 10.1016/j.sjbs.2019.08.015. Epub 2019 Aug 22.

PMID: 31889840
3

Complete nucleotide sequence of a begomovirus associated with an alphasatellite and a betasatellite naturally infecting okra in Jordan.

Salem NM, et al.  Arch Virol. 2021 Jul;166(7):2033-2036. doi: 10.1007/s00705-021-05075-1. Epub 2021 Apr 26.

PMID: 33900467
4

Introduction of Cotton leaf curl Gezira virus into the United Arab Emirates.

Idris A, et al.  Plant Dis. 2014 Nov;98(11):1593. doi: 10.1094/PDIS-08-14-0838-PDN.

PMID: 30699838
5

High-Throughput Sequencing Identified Distinct Bipartite and Monopartite Begomovirus Variants Associated with DNA-Satellites from Tomato and Muskmelon Plants in Saudi Arabia.

AlHudaib KA, et al.  Plants (Basel). 2022 Dec 20;12(1):6. doi: 10.3390/plants12010006.

PMID: 36616136