Okra leaf curl betasatellite

Basic Information

Abbreviation OLCuB
Genebank Accession GU111963
Isolate IN-EL38-06
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGGAGTCTGAGTCGTTGTGGGACCCACAGATGAATGAAGTTCATGGGTGATTTCAAGTATATGGAGGAAATTGTGGATGAGAAAAATGAATCATGTTTGGTCTCTGCAAGAGATTCTTGGTCGAGTTCTATCGTGCCAGACTCTGCTTGCACAGTGATGGTCTTCACTCCTCGTCTATTAAACTCTAAATTATTATCTTATTATCAATAGTTACTGGTGGGTTTACATCCATTCCCATTATATCTTCGTTTTCGGTGGTAATAATATCCGTCATGTGTATGACGTCTTCGTCGAGTATTTCTTCTGCTATTGAACCCCAGTAATGAAACTTGAAGGTTGATGTGATCGTTCCTTCTAAACCGTTGAAGTCGAATGGAATGTGTAATTGTTGGTATGTGTAGTCGATGATGAATGTTCTTGTTGAAATGGCTGGAGATCTTGTTGAACTGATCTGCATATGGACTGATATCCTTTGTTGTTGCATGAGCCTGACATCTACTTTGAAGACGATCCCCTCCCTGTTTTTGCTGAACCTTGTCATCTTGAATGTGCGTTAAAGTATATGTGTCAAATGAATATATAGATGAAATGTATAGATACTTCCACATAATGTGTGGATATCATTTTAAATGATATATGTGGTTCTTGTTTGTTTGCACATAATATCTGGTATAATGGATAATAAGGTAGTATATATGTAGTTATTTATAAATTGAAGAAATAGAAATACTGTGTTACAGATATACGGGTATATTTGTAGGATAAGAAAAAGAAAAGAGGAAATAGAGGAAAAATGAAACCAGAAAGAAAGGAAATATATATAAACTAAAAAAAGAAAAGGGAGCGCAGCGAGAAAAAAAAATAATCGGAAAAGAAAAAAATAAGAAAATCAAATAAAGAAAATTCACAAAGAAAAATAAAGAAGAAAAAATCCGAGGTCAAAACGAAGCCGTTTTGTGGAGGAAAAGGAAAGAAAACGGTCAATGTATATTTTTTACCAGTTACCGCACAGTAAATGGTAAATAGTAAATGAGTGGGTAAAATATAGAGTCCCCGATAGGTAAATTGACACCAATATATCGGTACTCAATCGGGTCCTCTGGAGTCTTAGGAAGTGCTTGTTTACCATTTTGCCCCTACTTTCAAGTTATATCGCGCTCGTAGTGCGCTTAAAAAGTTATCTTCTCTCTCTTCAGTTCCGATAAAAACCTAATTTCCCGATGATCGGAGTCGAATTTTCCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession ADQ55860.1
Location 197-553
Gene Name C1
Protein Name C1 protein
Coding Region ATGACAAGGTTCAGCAAAAACAGGGAGGGGATCGTCTTCAAAGTAGATGTCAGGCTCATGCAACAACAAAGGATATCAGTCCATATGCAGATCAGTTCAACAAGATCTCCAGCCATTTCAACAAGAACATTCATCATCGACTACACATACCAACAATTACACATTCCATTCGACTTCAACGGTTTAGAAGGAACGATCACATCAACCTTCAAGTTTCATTACTGGGGTTCAATAGCAGAAGAAATACTCGACGAAGACGTCATACACATGACGGATATTATTACCACCGAAAACGAAGATATAATGGGAATGGATGTAAACCCACCAGTAACTATTGATAATAAGATAATAATTTAG
Protein Sequence MTRFSKNREGIVFKVDVRLMQQQRISVHMQISSTRSPAISTRTFIIDYTYQQLHIPFDFNGLEGTITSTFKFHYWGSIAEEILDEDVIHMTDIITTENEDIMGMDVNPPVTIDNKIII

References More References in PubMed

1

Molecular characterization of begomovirus-betasatellite-alphasatellite complex associated with okra enation leaf curl disease in Northern Sri Lanka.

Emmanuel CJ, et al.  3 Biotech. 2020 Dec;10(12):506. doi: 10.1007/s13205-020-02502-z. Epub 2020 Nov 4.

PMID: 33184593
2

Bhendi Yellow Vein Mosaic Virus and Bhendi Yellow Vein Mosaic Betasatellite Cause Enation Leaf Curl Disease and Alter Host Phytochemical Contents in Okra.

Singh AK, et al.  Plant Dis. 2021 Sep;105(9):2595-2600. doi: 10.1094/PDIS-12-20-2655-RE. Epub 2021 Oct 28.

PMID: 33393356
3

First Report of Okra enation leaf curl virus and Associated Cotton leaf curl Multan betasatellite and Cotton leaf curl Multan alphasatellite Infecting Cotton in Pakistan: A New Member of the Cotton Leaf Curl Disease Complex.

Hameed U, et al.  Plant Dis. 2014 Oct;98(10):1447. doi: 10.1094/PDIS-04-14-0345-PDN.

PMID: 30704006
4

Accumulation and transmission of alphasatellite, betasatellite and tomato yellow leaf curl virus in susceptible and Ty-1-resistant tomato plants.

Conflon D, et al.  Virus Res. 2018 Jul 15;253:124-134. doi: 10.1016/j.virusres.2018.06.003. Epub 2018 Jun 15.

PMID: 29908896
5

Genetic variability of Cotton leaf curl betasatellite in Northern India.

Sohrab SS, et al.  Saudi J Biol Sci. 2014 Dec;21(6):626-31. doi: 10.1016/j.sjbs.2014.11.006. Epub 2014 Nov 13.

PMID: 25473373
6

Infectivity of okra enation leaf curl virus and the role of its V2 protein in pathogenicity.

Saeed F, et al.  Virus Res. 2018 Aug 15;255:90-94. doi: 10.1016/j.virusres.2018.07.007. Epub 2018 Jul 18.

PMID: 30009848
7

Molecular diversity of cotton leaf curl Gezira virus isolates and their satellite DNAs associated with okra leaf curl disease in Burkina Faso.

Tiendrébéogo F, et al.  Virol J. 2010 Feb 23;7:48. doi: 10.1186/1743-422X-7-48.

PMID: 20178575
8

Molecular characterization of begomoviruses and DNA satellites associated with okra leaf curl disease in Cameroon.

Leke WN, et al.  Virus Res. 2013 Jun;174(1-2):116-25. doi: 10.1016/j.virusres.2013.03.010. Epub 2013 Mar 25.

PMID: 23535770
9

Agrobacterium-mediated co-inoculation of okra plants with cloned okra enation leaf curl virus DNA and bhendi yellow vein mosaic beta-satellite DNA furthers Koch's postulates for enation leaf curl disease.

Gupta K, et al.  J Virol Methods. 2022 Feb;300:114413. doi: 10.1016/j.jviromet.2021.114413. Epub 2021 Dec 10.

PMID: 34902462
10

Complete nucleotide sequences of okra isolates of Cotton leaf curl Gezira virus and their associated DNA-beta from Niger.

Shih SL, et al.  Arch Virol. 2009;154(2):369-72. doi: 10.1007/s00705-008-0304-6. Epub 2009 Jan 21.

PMID: 19156351