Ludwigia leaf distortion betasatellite 3

Basic Information

Abbreviation LuLDB3
Genebank Accession KT390358
Isolate IN-Okr-OK100-14
Download Genome |GFF3 |PEP |CDS

Genome

CCGTGGGCGAGCGGAGTTCGGTGCTCAAAAGTGGGTCCCGCATGGTGGTGGACTGAAGGAGAAGACCATTATACTGGGCTTTAATCATTAAAGCCCAATAAGAAATGTTGGGCCTCAAGCACTATTCCTGATAGGGATGGATAATTGTCTTTCGATGATGCGGTTGTCATTATGTTAATCATCCTATTAACATAATCATTAGAGGAAATTAAATTATTATCTTCTTATTGAATATGTAAGGTTCGATTACATCCCTTCCCATGATATCTGGGTTTTCAATAATAATCCTATCCACCATATGTCCGATGTCTTCGTCAAGTATTTCTTCTGCTTTTGAACCCCAGTAATGAAACTTGAAGGTTGATGTGATCGTTCCTTCTAAACCGTTGAAGTCGAATGGAATGTGTAATTGTTGGTATGTGTAGTCGATGATGAATGTTCTTGTTGAAATGGCTGGAGATTTTGTTGAACTGATCTGCATATGGACCGATATCCTTTGTTGTTGCATGAGCCTGACATCTACTTTGAAAACGATCCCCTCCCTGTTTTTGCTGAACCTTGTCATGTGTGGTTGTGTGATGGGATTGATCATTATGCCTTCATTTATAGACCTAAACGTGAGATATTTGGTGTTGTTGTGTGGTTGTGAGTGATCCATGATTATGTGAATGTTGATTAATATCATAAAGAGATGGGGGGGATGTATTTCAAGGGTTGTGATGTTGGCTTGAAATGAGTAAAAAATGGTTTGTAAGTATAATCCGGGATATACGGATGGAAAAAGGAAAAGAAAAAGGGGATTGAAGTGAAAAGGAAAGAAAATAAAAACAAAGAAAAAAATACTAATCAAGAAAGAAAACGGGAGGGCAGGGAAACGAAACCGGAAACCCGAGGAAAGAGAAAAAAATAAAAAGTAAAAAAAATAAAACTTGAAAACGCCATAGTTTGAGAGGAAGGAAAAAAAAAAGAAAAAATAAAATAGGAACCTAAAACGGTGAAGTTTGCAGGTGACTGGGTTTTTTTACCATTTACCGCCCAGTAAATGGTAAATGGGAAAAGGGGGGGAACCAAAAGGGTAAGCAGCAGCCTAAGTTATCCCGGAGATAAGCTCGCCCACGTTGGGGTCTCATAAATGGGCTTTCCTAAAATACCCCCGCTTTTGTGTCTAATAGGCGCGTCGGAGTGCGCCGATAAAGTTAACATTCTCTCTCCTCTTTTAGGACCTAATGTAATTTCCCGATGGTCGGAGTCGAATTTTCCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession ALB26195.1
Location 209-565
Gene Name C1
Protein Name C1
Coding Region ATGACAAGGTTCAGCAAAAACAGGGAGGGGATCGTTTTCAAAGTAGATGTCAGGCTCATGCAACAACAAAGGATATCGGTCCATATGCAGATCAGTTCAACAAAATCTCCAGCCATTTCAACAAGAACATTCATCATCGACTACACATACCAACAATTACACATTCCATTCGACTTCAACGGTTTAGAAGGAACGATCACATCAACCTTCAAGTTTCATTACTGGGGTTCAAAAGCAGAAGAAATACTTGACGAAGACATCGGACATATGGTGGATAGGATTATTATTGAAAACCCAGATATCATGGGAAGGGATGTAATCGAACCTTACATATTCAATAAGAAGATAATAATTTAA
Protein Sequence MTRFSKNREGIVFKVDVRLMQQQRISVHMQISSTKSPAISTRTFIIDYTYQQLHIPFDFNGLEGTITSTFKFHYWGSKAEEILDEDIGHMVDRIIIENPDIMGRDVIEPYIFNKKIII

References More References in PubMed

1

Molecular characterization of a distinct monopartite begomovirus associated with betasatellites and alphasatellites infecting Pisum sativum in Nepal.

Shahid MS, et al.  Virus Genes. 2017 Apr;53(2):300-306. doi: 10.1007/s11262-016-1424-9. Epub 2016 Dec 23.

PMID: 28012011
2

Sequence variability and phylogenetic relationship of betasatellite isolates associated with yellow vein mosaic disease of mesta in India.

Das S, et al.  Virus Genes. 2008 Dec;37(3):414-24. doi: 10.1007/s11262-008-0287-0. Epub 2008 Sep 20.

PMID: 18807163