Ludwigia leaf distortion betasatellite 2

Basic Information

Abbreviation LuLDB2
Genebank Accession EF614160
Isolate IN-Bah-Hib-06
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGGAGTCTCTGGCGAACGCAGTGGGTCCCACAGGGTGTTGGACTGAAGAAGAAGACCATTAGATTGGGCTTTAATCATTAAAGCCCAATAAGTAAATGTTGGGCCTGTGAAAATGGCCTTATATGGAGTAGGGCCCTTTTTGTTAGCGGTATGTTGTATATTTATTGCTGGTTTGTATTTGGAATTTAAACGGTGAACTTCTTATGGAATACGTATGGTTCAATTACATCCATTCCTAATATCTCTGGGTTTTCAAGTACAATTATATCTACTCTTTGAACTATATCTTCTATGTCAATCTCTTCTATCTTTGCTCCGTTGTATGCGAATATGAAATTCGCTATGATATTTCCTTCAAAGCCGTTGAAGTCGAATGGAACGTGCATGGCTTCGTACGTGTACTTGACGATCCCTTCATACTTGCTGATCGCTGGTGACTTGGTGGATACTAGGCTAATGTGAATGAAGATCTTCATGTTCCCCATTATGCGAACGTCGACTGTGAACCTGACTCCTTGTTTGTTTGTTCCGCTTCTCGTCATCTTGCTGTTTGATGGAGTATATCGTTATGTCCTTATTTATAGACCTAAACGTGAGATATTTGGTGATGTTGTGTGGTTGTGAGTGATCCATTAATATGTGATTGTGCATTAATATCCCAAAGTGATGATGGAGATGTATTACATGTGTGGTGACCTTGGCTTGAAATCTTTAGACATGGGCTTGTATATATATACCTGTATATACGTGAGTGCAAGAAAAAGGATAAGAAAATGTGGACTGAATTGAAAAGGAAAGACAAAGAAAAGAAAGAAGGAAGTACTAATCAAAGAAAAATAGGGGAGCGCAGCGGATCGAAACAAAGAACCCGAGAAAGAGGAAAATAAAAAATAAAAAAAAAATAAAACTCTAAAACGGCATCGTTTTAGAGGAAGGAAAAAAAGAAAAAATAAAACCAAGAACGGTATCGTTTGAAGGGTGACTCTGGGTTTTTACCATTTTACTGCGCGGTAAAATGGTAAAGGAGGGTTAAAAAATAGAGACACCGATAGGTAAATTGGGCACCGATAGGTAAAATGTACCCCAATATATCGGGGTACCAATTGGTGTACATAAATTGCCTTTCCTAAAATACCCCCCCTTTTGTGTCTAATAGGCGCGTCGGAGTGGCCTGAAAAAGTTAACATTCTCTCTCCTCTTTTGGACTCCAATACAATTTCCCGGTGATCGGAGTCGAATTTTCCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession ABR10669.1
Location 198-554
Gene Name C1
Protein Name beta C1
Coding Region ATGACGAGAAGCGGAACAAACAAACAAGGAGTCAGGTTCACAGTCGACGTTCGCATAATGGGGAACATGAAGATCTTCATTCACATTAGCCTAGTATCCACCAAGTCACCAGCGATCAGCAAGTATGAAGGGATCGTCAAGTACACGTACGAAGCCATGCACGTTCCATTCGACTTCAACGGCTTTGAAGGAAATATCATAGCGAATTTCATATTCGCATACAACGGAGCAAAGATAGAAGAGATTGACATAGAAGATATAGTTCAAAGAGTAGATATAATTGTACTTGAAAACCCAGAGATATTAGGAATGGATGTAATTGAACCATACGTATTCCATAAGAAGTTCACCGTTTAA
Protein Sequence MTRSGTNKQGVRFTVDVRIMGNMKIFIHISLVSTKSPAISKYEGIVKYTYEAMHVPFDFNGFEGNIIANFIFAYNGAKIEEIDIEDIVQRVDIIVLENPEILGMDVIEPYVFHKKFTV

References More References in PubMed

1

Association of a distinct strain of hollyhock yellow vein mosaic virus and Ludwigia leaf distortion betasatellite with yellow vein mosaic disease of hollyhock (Alcea rosea) in India.

Srivastava A, et al.  Arch Virol. 2014 Oct;159(10):2711-5. doi: 10.1007/s00705-014-2108-1. Epub 2014 May 9.

PMID: 24810100
2

Molecular characterization of a distinct monopartite begomovirus associated with betasatellites and alphasatellites infecting Pisum sativum in Nepal.

Shahid MS, et al.  Virus Genes. 2017 Apr;53(2):300-306. doi: 10.1007/s11262-016-1424-9. Epub 2016 Dec 23.

PMID: 28012011
3

Distribution, epidemiology and molecular variability of the begomovirus complexes associated with yellow vein mosaic disease of mesta in India.

Roy A, et al.  Virus Res. 2009 May;141(2):237-46. doi: 10.1016/j.virusres.2008.11.022. Epub 2009 Jan 31.

PMID: 19428737