Croton yellow vein mosaic betasatellite

Basic Information

Abbreviation	CroYVMB
Genebank Accession	AM410551
Isolate	PK-Pun-06
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGTGGGCGAGCGAAATTTTGGCCGTCCGTTGTGGGACCCACAGGGGGACTGTTACAGAAATGGGCTTCCTGTAGCTTTTGGGCTTACGAATTAATTGGGCCTTGGATCGATTAATTTGAGGTTGGGCCTGTTCGTAGAACATGCACCCATATAAAAAAAAATATTGGGCTGGATTGAAAATTCAAACAACATTTTATTCTGTTCAATAAAAATACAAATTACGCATTTACATATTTAGACACAACATATTCATCGTCAATATGAATATCATTTACAGGAGCTTCATGTATAATCAAAATATCTATGATTTCAGTCATATCCTCCTCCTTGAATTCATCAAATGATGCCATCCTATACATGATGGCTAATATGTTTTTGATTCCCTCTTCTAAATTATTGAAATCAAACGGAGGGATTATCCCTTCGTGGCCATAAGGGATGATGAACTTGTTCTTGACAAGAACCGGAGATCTTGTAGAGAATAGCTGAATTATAACATTGAATGAGTTGTTACTCTTCAACTTCACATCGATAATGAATTTCAAACCCGTCTCATTCTGATATATGATCGTCATTTTAGATGTGCAATAACTAAAAACAAATGTATCAATTTATAATGAAGATTATACATAAAATATGGACATAGATGAAATACGTGTTCTTATAATATTCACATAAATGGAATCCGATAAATTAAATGATAGTGACACCACTATTAAAATACTAATAATAAAAATAAAAACAATAAATGATAATTACGTGAGTGATTGTCATATCAGAAGCAAAAGAAAAAAAAAAGAAAAAAAATGAAATTGAACCAACAAACCCACCTATTATCCTAAAATGGGAGCGCAGCGAAACGACAAACCGAAGCTTGACGAAGGAGACTGAAAAACTCATACACCCACAAGCATTAAAACCTAAGAAGAAAAATCAGTGGAATCCACTGAATAAAAACAATAAAAAGAAAAAAGAAAACACATGAGTTATTTACTGTTTTACCGGATGGTAAAATAGTAAATGATATTTACCCAAGTGTAAATATCTGAGCCCCCAATAGGTAAATGTGTCCCCGATTGAGCCCCCAATATATTGGGGGCTCGGAAAGAGAAATAAATCCCGGATTCCAAAAATACCCCTGTCTCTGTGTCTGATAGGCGCGTGATAGTGGACTGAAAAAGTAGAGTTTCTCTCTCCTAAAACTCCTCCGATCTCCGATTCTGGCACTTCCGGTCATCAATTTACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTAGGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession	CAL68661.1
Location	221-577
Gene Name	beta C1
Protein Name	C1 protein
Coding Region	ATGACGATCATATATCAGAATGAGACGGGTTTGAAATTCATTATCGATGTGAAGTTGAAGAGTAACAACTCATTCAATGTTATAATTCAGCTATTCTCTACAAGATCTCCGGTTCTTGTCAAGAACAAGTTCATCATCCCTTATGGCCACGAAGGGATAATCCCTCCGTTTGATTTCAATAATTTAGAAGAGGGAATCAAAAACATATTAGCCATCATGTATAGGATGGCATCATTTGATGAATTCAAGGAGGAGGATATGACTGAAATCATAGATATTTTGATTATACATGAAGCTCCTGTAAATGATATTCATATTGACGATGAATATGTTGTGTCTAAATATGTAAATGCGTAA
Protein Sequence	MTIIYQNETGLKFIIDVKLKSNNSFNVIIQLFSTRSPVLVKNKFIIPYGHEGIIPPFDFNNLEEGIKNILAIMYRMASFDEFKEEDMTEIIDILIIHEAPVNDIHIDDEYVVSKYVNA

References More References in PubMed

1	Natural infection of croton yellow vein mosaic virus and its cognate betasatellite in germplasm of different Crambe spp in India. Kumar A, et al. Virus Res. 2018 Jan 2;243:60-64. doi: 10.1016/j.virusres.2017.10.005. Epub 2017 Oct 12. PMID: 29031475
2	A new variant of Croton yellow vein mosaic virus naturally infecting wild sunflower in India. Sharma R, et al. Virusdisease. 2018 Dec;29(4):513-519. doi: 10.1007/s13337-018-0495-8. Epub 2018 Nov 15. PMID: 30539055
3	Identification and Functional Analysis of Four RNA Silencing Suppressors in Begomovirus Croton Yellow Vein Mosaic Virus. Zhai Y, et al. Front Plant Sci. 2022 Jan 7;12:768800. doi: 10.3389/fpls.2021.768800. eCollection 2021. PMID: 35069624
4	RNAi mediated gene silencing against betasatellite associated with Croton yellow vein mosaic begomovirus. Sahu AK, et al. Mol Biol Rep. 2014 Nov;41(11):7631-8. doi: 10.1007/s11033-014-3653-0. Epub 2014 Aug 3. PMID: 25086625
5	Host range and genetic diversity of croton yellow vein mosaic virus, a weed-infecting monopartite begomovirus causing leaf curl disease in tomato. Pramesh D, et al. Arch Virol. 2013 Mar;158(3):531-42. doi: 10.1007/s00705-012-1511-8. Epub 2012 Oct 25. PMID: 23096697
6	Agroinfection of tobacco by croton yellow vein mosaic virus and designing of a replicon vector for expression of foreign gene in plant. Jailani AAK, et al. Virusdisease. 2016 Sep;27(3):277-286. doi: 10.1007/s13337-016-0326-8. Epub 2016 Jul 4. PMID: 28466040
7	Complete nucleotide sequence of a begomovirus and associated betasatellite infecting croton (Croton bonplandianus) in Pakistan. Hussain K, et al. Arch Virol. 2011 Jun;156(6):1101-5. doi: 10.1007/s00705-011-0993-0. Epub 2011 Apr 13. PMID: 21487662
8	Natural association of two different betasatellites with Sweet potato leaf curl virus in wild morning glory (Ipomoea purpurea) in India. Swapna Geetanjali A, et al. Virus Genes. 2013 Aug;47(1):184-8. doi: 10.1007/s11262-013-0901-7. Epub 2013 Mar 26. PMID: 23529301
9	Dominance of recombinant cotton leaf curl Multan-Rajasthan virus associated with cotton leaf curl disease outbreak in northwest India. Biswas KK, et al. PLoS One. 2020 Apr 22;15(4):e0231886. doi: 10.1371/journal.pone.0231886. eCollection 2020. PMID: 32320461
10	Molecular characterization of two distinct monopartite begomoviruses infecting tomato in India. Pandey P, et al. Virol J. 2010 Nov 23;7:337. doi: 10.1186/1743-422X-7-337. PMID: 21092241