Croton yellow vein mosaic betasatellite


Basic Information

Abbreviation CroYVMB
Genebank Accession AM410551
Isolate PK-Pun-06
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGAAATTTTGGCCGTCCGTTGTGGGACCCACAGGGGGACTGTTACAGAAATGGGCTTCCTGTAGCTTTTGGGCTTACGAATTAATTGGGCCTTGGATCGATTAATTTGAGGTTGGGCCTGTTCGTAGAACATGCACCCATATAAAAAAAAATATTGGGCTGGATTGAAAATTCAAACAACATTTTATTCTGTTCAATAAAAATACAAATTACGCATTTACATATTTAGACACAACATATTCATCGTCAATATGAATATCATTTACAGGAGCTTCATGTATAATCAAAATATCTATGATTTCAGTCATATCCTCCTCCTTGAATTCATCAAATGATGCCATCCTATACATGATGGCTAATATGTTTTTGATTCCCTCTTCTAAATTATTGAAATCAAACGGAGGGATTATCCCTTCGTGGCCATAAGGGATGATGAACTTGTTCTTGACAAGAACCGGAGATCTTGTAGAGAATAGCTGAATTATAACATTGAATGAGTTGTTACTCTTCAACTTCACATCGATAATGAATTTCAAACCCGTCTCATTCTGATATATGATCGTCATTTTAGATGTGCAATAACTAAAAACAAATGTATCAATTTATAATGAAGATTATACATAAAATATGGACATAGATGAAATACGTGTTCTTATAATATTCACATAAATGGAATCCGATAAATTAAATGATAGTGACACCACTATTAAAATACTAATAATAAAAATAAAAACAATAAATGATAATTACGTGAGTGATTGTCATATCAGAAGCAAAAGAAAAAAAAAAGAAAAAAAATGAAATTGAACCAACAAACCCACCTATTATCCTAAAATGGGAGCGCAGCGAAACGACAAACCGAAGCTTGACGAAGGAGACTGAAAAACTCATACACCCACAAGCATTAAAACCTAAGAAGAAAAATCAGTGGAATCCACTGAATAAAAACAATAAAAAGAAAAAAGAAAACACATGAGTTATTTACTGTTTTACCGGATGGTAAAATAGTAAATGATATTTACCCAAGTGTAAATATCTGAGCCCCCAATAGGTAAATGTGTCCCCGATTGAGCCCCCAATATATTGGGGGCTCGGAAAGAGAAATAAATCCCGGATTCCAAAAATACCCCTGTCTCTGTGTCTGATAGGCGCGTGATAGTGGACTGAAAAAGTAGAGTTTCTCTCTCCTAAAACTCCTCCGATCTCCGATTCTGGCACTTCCGGTCATCAATTTACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTAGGCCGGAGCTTAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession CAL68661.1
Location 221-577
Gene Name beta C1
Protein Name C1 protein
Coding Region ATGACGATCATATATCAGAATGAGACGGGTTTGAAATTCATTATCGATGTGAAGTTGAAGAGTAACAACTCATTCAATGTTATAATTCAGCTATTCTCTACAAGATCTCCGGTTCTTGTCAAGAACAAGTTCATCATCCCTTATGGCCACGAAGGGATAATCCCTCCGTTTGATTTCAATAATTTAGAAGAGGGAATCAAAAACATATTAGCCATCATGTATAGGATGGCATCATTTGATGAATTCAAGGAGGAGGATATGACTGAAATCATAGATATTTTGATTATACATGAAGCTCCTGTAAATGATATTCATATTGACGATGAATATGTTGTGTCTAAATATGTAAATGCGTAA
Protein Sequence MTIIYQNETGLKFIIDVKLKSNNSFNVIIQLFSTRSPVLVKNKFIIPYGHEGIIPPFDFNNLEEGIKNILAIMYRMASFDEFKEEDMTEIIDILIIHEAPVNDIHIDDEYVVSKYVNA

References More References in PubMed

1

Natural infection of croton yellow vein mosaic virus and its cognate betasatellite in germplasm of different Crambe spp in India.

Kumar A, et al.  Virus Res. 2018 Jan 2;243:60-64. doi: 10.1016/j.virusres.2017.10.005. Epub 2017 Oct 12.

PMID: 29031475

2

A new variant of Croton yellow vein mosaic virus naturally infecting wild sunflower in India.

Sharma R, et al.  Virusdisease. 2018 Dec;29(4):513-519. doi: 10.1007/s13337-018-0495-8. Epub 2018 Nov 15.

PMID: 30539055

3

Identification and Functional Analysis of Four RNA Silencing Suppressors in Begomovirus Croton Yellow Vein Mosaic Virus.

Zhai Y, et al.  Front Plant Sci. 2022 Jan 7;12:768800. doi: 10.3389/fpls.2021.768800. eCollection 2021.

PMID: 35069624

4

RNAi mediated gene silencing against betasatellite associated with Croton yellow vein mosaic begomovirus.

Sahu AK, et al.  Mol Biol Rep. 2014 Nov;41(11):7631-8. doi: 10.1007/s11033-014-3653-0. Epub 2014 Aug 3.

PMID: 25086625

5

Host range and genetic diversity of croton yellow vein mosaic virus, a weed-infecting monopartite begomovirus causing leaf curl disease in tomato.

Pramesh D, et al.  Arch Virol. 2013 Mar;158(3):531-42. doi: 10.1007/s00705-012-1511-8. Epub 2012 Oct 25.

PMID: 23096697

6

Agroinfection of tobacco by croton yellow vein mosaic virus and designing of a replicon vector for expression of foreign gene in plant.

Jailani AAK, et al.  Virusdisease. 2016 Sep;27(3):277-286. doi: 10.1007/s13337-016-0326-8. Epub 2016 Jul 4.

PMID: 28466040

7

Complete nucleotide sequence of a begomovirus and associated betasatellite infecting croton (Croton bonplandianus) in Pakistan.

Hussain K, et al.  Arch Virol. 2011 Jun;156(6):1101-5. doi: 10.1007/s00705-011-0993-0. Epub 2011 Apr 13.

PMID: 21487662

8

Natural association of two different betasatellites with Sweet potato leaf curl virus in wild morning glory (Ipomoea purpurea) in India.

Swapna Geetanjali A, et al.  Virus Genes. 2013 Aug;47(1):184-8. doi: 10.1007/s11262-013-0901-7. Epub 2013 Mar 26.

PMID: 23529301

9

Dominance of recombinant cotton leaf curl Multan-Rajasthan virus associated with cotton leaf curl disease outbreak in northwest India.

Biswas KK, et al.  PLoS One. 2020 Apr 22;15(4):e0231886. doi: 10.1371/journal.pone.0231886. eCollection 2020.

PMID: 32320461

10

Molecular characterization of two distinct monopartite begomoviruses infecting tomato in India.

Pandey P, et al.  Virol J. 2010 Nov 23;7:337. doi: 10.1186/1743-422X-7-337.

PMID: 21092241