Cotton leaf curl Burkina Faso betasatellite

Basic Information

Abbreviation CLCuBFB
Genebank Accession MK032307
Isolate BF-Sid28BB-14
Download Genome |GFF3 |PEP |CDS

Genome

ACCGGGGGCGAGCGGTGCCTGAGAGGTTTTGGTGGGTCCCACTAAGAAGAAAGAAGATGGGAAGCGTCAGCTGGGCTTGAATTTGATTCTTTATTGGGCTTTGATTTGGGTTTTTGTCGTTGAGGCCCATTCTTGTTAAAAGGAAATAAATTTTATTAATTGCATCTTGGGTACATAACTATCTCAAACATTACACGGAGGTCCTAGTAATGATGCGGTGCGGTTCAATGATCTCCATTCCCATTAAATTCTCGTTCTCTGCCATGACGAGATCCACTGCGTCCACTAGGTCTTCTCCTCTTACGTCCTTGTGCTCTGTTCCGTGGAAGAGTGACTGGAATGCGTGAGCTATGCTGTTCTCTGTTCCGTTGAAGTCGAATGGAATGATGACTTCTAGGAACGAGTAGGGGACGATGAAGGTGGAAGTGCTGAGGTATGCCTGCTTTGTTGCTGTTACCTGGACCTTACAGTGGATCCTTTCGTTGACGATGAGGACGTCGATTCTGAATTCCACTCCTCTGGTGTTCTTGTACCTGATTGTCATGTTTGCTTTGTGTCAGTGAGATCTACTGGAATGTTGTTATATAGGCAATCAAGGATAAATATCTTCTTGTTACATGGTCTATGATGGAACACGTATCATATCTAACTGCCATTGAAGTCCTAATCATCCTAATCATCCCATGACGTAATAATCCCTGATTAGTGCGTACGTAACTGTTATTTGTTATGCTAATCATAGGTGGTGAAAAGATGGAAAACAACACATGAGGAAGGATAAACATTAAACTTGAGAAAAACAGGGGAGCGCAGCGACCAAAAAAAAAAACACCCTGAAAGAAAAAAAAACCAAAAAAAAGGAAATTTAAAATAAAAAAAATAAAATTAAAAAGAAAAATAAAAAAAGGATTCATGGGATGGTTAGCTGTCTGGGTTTCCCCATGCGGTTAGTAGAAGTCAATGGTGGAAGGTGAGACCTTGTCCGGTTGATGCGAATTGCTTCAGGACTATTTATTACGGTGTTCATATTTACCGTTCCGTTTTACCCTTTACCCGTTCCGTAACTGATCACCGATACGTTATTGATCACCAATATATCGGTACTCAATTGGGGATAGGAAGGAGGCACATATGGTCACTTTACTGAAATACCCCTGTAAAGCAGAGAGAAAGGGCGCGTGAGGTGCTCGGAAAAAGTAGACCTTCTCTCTCCTCATTTCCGGTGAACCTCCAATTCTGGCAGTTCCCGGCGTCAATTTACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGAAACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCCTAGCTCGCCCCCGTTCTAATATT

Gene Information

NCBI Accession QEL50696.1
Location 191-544
Gene Name betaC1
Protein Name betaC1 protein
Coding Region ATGACAATCAGGTACAAGAACACCAGAGGAGTGGAATTCAGAATCGACGTCCTCATCGTCAACGAAAGGATCCACTGTAAGGTCCAGGTAACAGCAACAAAGCAGGCATACCTCAGCACTTCCACCTTCATCGTCCCCTACTCGTTCCTAGAAGTCATCATTCCATTCGACTTCAACGGAACAGAGAACAGCATAGCTCACGCATTCCAGTCACTCTTCCACGGAACAGAGCACAAGGACGTAAGAGGAGAAGACCTAGTGGACGCAGTGGATCTCGTCATGGCAGAGAACGAGAATTTAATGGGAATGGAGATCATTGAACCGCACCGCATCATTACTAGGACCTCCGTGTAA
Protein Sequence MTIRYKNTRGVEFRIDVLIVNERIHCKVQVTATKQAYLSTSTFIVPYSFLEVIIPFDFNGTENSIAHAFQSLFHGTEHKDVRGEDLVDAVDLVMAENENLMGMEIIEPHRIITRTSV

References More References in PubMed

1

Molecular diversity of cotton leaf curl Gezira virus isolates and their satellite DNAs associated with okra leaf curl disease in Burkina Faso.

Tiendrébéogo F, et al.  Virol J. 2010 Feb 23;7:48. doi: 10.1186/1743-422X-7-48.

PMID: 20178575
2

Accumulation and transmission of alphasatellite, betasatellite and tomato yellow leaf curl virus in susceptible and Ty-1-resistant tomato plants.

Conflon D, et al.  Virus Res. 2018 Jul 15;253:124-134. doi: 10.1016/j.virusres.2018.06.003. Epub 2018 Jun 15.

PMID: 29908896
3

Molecular characterization of begomoviruses and DNA satellites associated with okra leaf curl disease in Cameroon.

Leke WN, et al.  Virus Res. 2013 Jun;174(1-2):116-25. doi: 10.1016/j.virusres.2013.03.010. Epub 2013 Mar 25.

PMID: 23535770