Codiaeum leaf curl betasatellite

Basic Information

Abbreviation CoLCuB
Genebank Accession MF278784
Isolate PK-AA2-16
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGGTGCCTCCGGGGACGTAGTGGGTCCCACATGTTAGAACTTCAGAATTATTGGGCCTGTAAATGCTATTGGGCCTGTTTGTATTGGGCTTTTATCATACATTGAAATTGGGCTTCGTATATTAGAGAATATGATAACAAAACATTCTCATTTATTATTGTTATAAATACGCATTTATACGGATGAATGCGTAAACACATCGTATGCATCCATTACATTAATGTCTATTACAGGAGCCTCTTCCATCATTAGCATATCAATTCCCTCCACCATGTCTTCTTGTTTGAATTCTCCTATAGTAGACTCCTTGTACATGAGGGCTAACATGTTTTGTATCCCTTCTTCCAGATTATTGAAGTTGAATGGCGGTATGATTCCACTGTGCCCGTATGGAATCATGAACTTCTTCGTCGTCAGTGATGGAGATCCTGTTGAGAATAGCTGTATTTGAACCAGAATGGAGTTATCTGTTTTCAATCGGACGTCTATGATGAATTTCATTCCCTTCTGGTTATTGTATTTGATCGTCATTTTGTTGTGTGTGTGTTCATGACATATGAACACACATTAAATAGAACGAAAAGTTGTGATATATGGTTATTATTGATATACGTGGTTTGGTTATGTTCATATATTTTGTAGTGGAGATATTTTTCATGGATGTTGACGTTGATATTAATTGGTTTTGTAAGTGGGAGTTCTAATGAATCCTAATTATTATATAATTAGGAAGAAGAAAATTAAAAAGAAAAAAAAGGATAAGAAAAGGAAAAAATATCTATAACACTTAACCCTAAAATATATATAACACTTAACCATGAATTCTATTCGTTGAAAATGGTCGCGCAGCGAAAAAGGAAACCGAAACTAACAAAAGAAATGAAAAAAAAATGAAAAAAGAAATAAACAACATATGAAACGTGAGAAGAAGACAATAACAACAAGAATAATCAGTGGTCCTCACTGAATAAATAAAATTAAAATAAAAAAAAGAATGTATTTGTTTTTACTGCGTGGTAATTTAGTAAATTATAAATTACTGAGGTGAATGGGTAAATGTAGTAAGGTAAATGTGTCCCCAATAGGTAAATTGAGTACCAATATATCGGTGATCAATTGGGTACTCATAATTGGTGTTGCCTAAAATACCCCTATCTTTGTGTCTGGAAGGCGCGTGGGAGTGGACTGAAAAAGTAGAGTTTCTCTCACCTAAAACCCGCCGGAACGCCAAAACTGGCTGTTGCCGGCATAAATTTACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCACGCTCTAATATT

Gene Information

NCBI Accession AWC14994.1
Location 187-543
Gene Name betaC1
Protein Name betaC1 protein
Coding Region ATGACGATCAAATACAATAACCAGAAGGGAATGAAATTCATCATAGACGTCCGATTGAAAACAGATAACTCCATTCTGGTTCAAATACAGCTATTCTCAACAGGATCTCCATCACTGACGACGAAGAAGTTCATGATTCCATACGGGCACAGTGGAATCATACCGCCATTCAACTTCAATAATCTGGAAGAAGGGATACAAAACATGTTAGCCCTCATGTACAAGGAGTCTACTATAGGAGAATTCAAACAAGAAGACATGGTGGAGGGAATTGATATGCTAATGATGGAAGAGGCTCCTGTAATAGACATTAATGTAATGGATGCATACGATGTGTTTACGCATTCATCCGTATAA
Protein Sequence MTIKYNNQKGMKFIIDVRLKTDNSILVQIQLFSTGSPSLTTKKFMIPYGHSGIIPPFNFNNLEEGIQNMLALMYKESTIGEFKQEDMVEGIDMLMMEEAPVIDINVMDAYDVFTHSSV

References More References in PubMed

1

Codiaeum variegatum in Pakistan harbours pedilanthus leaf curl virus and papaya leaf curl virus as well as a newly identified betasatellite.

Akram A, et al.  Arch Virol. 2020 Aug;165(8):1877-1881. doi: 10.1007/s00705-020-04633-3. Epub 2020 May 23.

PMID: 32447620
2

Molecular characterization of novel bipartite begomovirus associated with enation leaf disease of Garden croton (Codiaeum variegatum L.).

Venkataravanappa V, et al.  Virusdisease. 2022 Jun;33(2):194-207. doi: 10.1007/s13337-022-00772-0. Epub 2022 Jul 1.

PMID: 35991698