Tomato yellow leaf curl Yunnan betasatellite

Basic Information

Abbreviation	ToYLCYnB
Genebank Accession	KF640694
Isolate	CN-tob-
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGGTGGCGAGCGGGGATTTTTGCCAGAATGTGGGTCCCACATAGAAGAAGAAAGAGAAAGTGGGCCTTGGCTATGCAATTGGGCCTTTATTTTATGGGCTTGGAGGAATTGGACTCTGTATATTGGGCCTAATTAGAATAAATATATTGGGATAGAATAATATGAAATTTATTTAATTGATATAATTGAATACGTATGCATACGTATTCATACACTGGAGTTTATAAATACATCGTATTCATCCCCTACATCTATATCCTCTACTGGTGCTTCTTCCATCATGAGGATATCTATAACTTGTACCATATCTTCTTGCTTGAATTCCCCAATTGTAGACTCTTTGTACATTATTTTGAGACAGTGTTTGATGCCTTCTTCTAAGCTGTTGAAATCGATTGGTGGGATGATCCCCTGGTGCCTGTATGGTATCATGAACTTCTTCTTGGCTAATGCTGGTGCCTTTGTTGATGCTAGTTCAATCTGAACAAGGAATGAAGTATCTTCCTGCAACTTGACATCTATGAGGAATTCCAAACCCTTCATGTTGTTGTATTTGATTGTCATGCTTACTTGATGTGGATTATACCTGATGCTTGCCGTCTTAAGTAATGTTAGGAACTGTGATATATGGACTTGAATTATTTACGTGGATGATTGTTATTCATATATCTGGTAGTGGAGAAATTCATGTTTGATAGTGACATTACTATCAAAGATGATTACTTTTTGTTAATGACATAATAAGCTAGACAATTATGTGTAAATATAATTGGATAGAATAATAAGAAAGAAAAATAAAAAAGAAAGAAAATAAAACATAAAAAGGAAGATATTAAACATAAACCCAACCAAACATATATTAAGAAAAAAAAGGGAGCGCAGCGAAAAAAAAAAAATAATTTTGAAACCATCAAAATCAACAAAACAGAAAAAAGAATCATAAAAAAAATAGAAAAAAAATATAAAAAAATAAAGAAATCAGTAAAAAACGTCACAACGGTTTTACTGCGCGGTTAAAAAAAAGTTACTTTCAACACGGAGGTTATTTTCTTGGACCCTAAAGGTAAATGAGGCCCCGATACATCGGTGCCTCTATTAGGTCCTCGATTTTCAATTTCCCAAAATACCCTTATCCCTGTGTCTAAAGGGCGCGTGGTATTGCGCTGAAAAAGTTAAGTTTCTCTCTCCAAAAACTCACCGGACCTCCGGTTGAGGCCCTTCCGGTCATCAATTTGCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCACCGTTCTAATATT

Gene Information

NCBI Accession	AHA39102.1
Location	210-566
Gene Name	beta C1
Protein Name	beta C1 protein
Coding Region	ATGACAATCAAATACAACAACATGAAGGGTTTGGAATTCCTCATAGATGTCAAGTTGCAGGAAGATACTTCATTCCTTGTTCAGATTGAACTAGCATCAACAAAGGCACCAGCATTAGCCAAGAAGAAGTTCATGATACCATACAGGCACCAGGGGATCATCCCACCAATCGATTTCAACAGCTTAGAAGAAGGCATCAAACACTGTCTCAAAATAATGTACAAAGAGTCTACAATTGGGGAATTCAAGCAAGAAGATATGGTACAAGTTATAGATATCCTCATGATGGAAGAAGCACCAGTAGAGGATATAGATGTAGGGGATGAATACGATGTATTTATAAACTCCAGTGTATGA
Protein Sequence	MTIKYNNMKGLEFLIDVKLQEDTSFLVQIELASTKAPALAKKKFMIPYRHQGIIPPIDFNSLEEGIKHCLKIMYKESTIGEFKQEDMVQVIDILMMEEAPVEDIDVGDEYDVFINSSV

References More References in PubMed

1	First Report of Tomato yellow leaf curl China virus with Betasatellite Infecting Panax notoginseng. Li XJ, et al. Plant Dis. 2014 Sep;98(9):1284. doi: 10.1094/PDIS-03-14-0255-PDN. PMID: 30699620
2	Identification and Analysis of Potential Genes Regulated by an Alphasatellite (TYLCCNA) that Contribute to Host Resistance against Tomato Yellow Leaf Curl China Virus and Its Betasatellite (TYLCCNV/TYLCCNB) Infection in Nicotiana benthamiana. Luo C, et al. Viruses. 2019 May 15;11(5):442. doi: 10.3390/v11050442. PMID: 31096636
3	ty-5 Confers Broad-Spectrum Resistance to Geminiviruses. Ren Y, et al. Viruses. 2022 Aug 17;14(8):1804. doi: 10.3390/v14081804. PMID: 36016426
4	Association of an alphasatellite with tomato yellow leaf curl virus and ageratum yellow vein virus in Japan is suggestive of a recent introduction. Shahid MS, et al. Viruses. 2014 Jan 14;6(1):189-200. doi: 10.3390/v6010189. PMID: 24424499
5	Identification of a novel pepper-infecting monopartite begomovirus in China. Li P, et al. Arch Virol. 2021 Jun;166(6):1751-1754. doi: 10.1007/s00705-021-04989-0. Epub 2021 Mar 20. PMID: 33743050
6	Characterization of alphasatellites associated with monopartite begomovirus/betasatellite complexes in Yunnan, China. Xie Y, et al. Virol J. 2010 Aug 3;7:178. doi: 10.1186/1743-422X-7-178. PMID: 20678232
7	Divergent Symptoms Caused by Geminivirus-Encoded C4 Proteins Correlate with Their Ability To Bind NbSKη. Mei Y, et al. J Virol. 2020 Sep 29;94(20):e01307-20. doi: 10.1128/JVI.01307-20. Print 2020 Sep 29. PMID: 32759325
8	A recombinant begomovirus resulting from exchange of the C4 gene. Xie Y, et al. J Gen Virol. 2013 Aug;94(Pt 8):1896-1907. doi: 10.1099/vir.0.053181-0. Epub 2013 May 29. PMID: 23720217
9	A diverse set of miRNAs responsive to begomovirus-associated betasatellite in Nicotiana benthamiana. Xiao B, et al. BMC Plant Biol. 2014 Mar 11;14:60. doi: 10.1186/1471-2229-14-60. PMID: 24618068
10	A naturally occurring defective DNA satellite associated with a monopartite begomovirus: evidence for recombination between alphasatellite and betasatellite. Huang C, et al. Viruses. 2013 Sep 6;5(9):2116-28. doi: 10.3390/v5092116. PMID: 24018984