Tomato yellow leaf curl Yunnan betasatellite


Basic Information

Abbreviation ToYLCYnB
Genebank Accession KF640694
Isolate CN-tob-
Download Genome |GFF3 |PEP |CDS

Genome

ACCGGTGGCGAGCGGGGATTTTTGCCAGAATGTGGGTCCCACATAGAAGAAGAAAGAGAAAGTGGGCCTTGGCTATGCAATTGGGCCTTTATTTTATGGGCTTGGAGGAATTGGACTCTGTATATTGGGCCTAATTAGAATAAATATATTGGGATAGAATAATATGAAATTTATTTAATTGATATAATTGAATACGTATGCATACGTATTCATACACTGGAGTTTATAAATACATCGTATTCATCCCCTACATCTATATCCTCTACTGGTGCTTCTTCCATCATGAGGATATCTATAACTTGTACCATATCTTCTTGCTTGAATTCCCCAATTGTAGACTCTTTGTACATTATTTTGAGACAGTGTTTGATGCCTTCTTCTAAGCTGTTGAAATCGATTGGTGGGATGATCCCCTGGTGCCTGTATGGTATCATGAACTTCTTCTTGGCTAATGCTGGTGCCTTTGTTGATGCTAGTTCAATCTGAACAAGGAATGAAGTATCTTCCTGCAACTTGACATCTATGAGGAATTCCAAACCCTTCATGTTGTTGTATTTGATTGTCATGCTTACTTGATGTGGATTATACCTGATGCTTGCCGTCTTAAGTAATGTTAGGAACTGTGATATATGGACTTGAATTATTTACGTGGATGATTGTTATTCATATATCTGGTAGTGGAGAAATTCATGTTTGATAGTGACATTACTATCAAAGATGATTACTTTTTGTTAATGACATAATAAGCTAGACAATTATGTGTAAATATAATTGGATAGAATAATAAGAAAGAAAAATAAAAAAGAAAGAAAATAAAACATAAAAAGGAAGATATTAAACATAAACCCAACCAAACATATATTAAGAAAAAAAAGGGAGCGCAGCGAAAAAAAAAAAATAATTTTGAAACCATCAAAATCAACAAAACAGAAAAAAGAATCATAAAAAAAATAGAAAAAAAATATAAAAAAATAAAGAAATCAGTAAAAAACGTCACAACGGTTTTACTGCGCGGTTAAAAAAAAGTTACTTTCAACACGGAGGTTATTTTCTTGGACCCTAAAGGTAAATGAGGCCCCGATACATCGGTGCCTCTATTAGGTCCTCGATTTTCAATTTCCCAAAATACCCTTATCCCTGTGTCTAAAGGGCGCGTGGTATTGCGCTGAAAAAGTTAAGTTTCTCTCTCCAAAAACTCACCGGACCTCCGGTTGAGGCCCTTCCGGTCATCAATTTGCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCACCGTTCTAATATT

Gene Information

NCBI Accession AHA39102.1
Location 210-566
Gene Name beta C1
Protein Name beta C1 protein
Coding Region ATGACAATCAAATACAACAACATGAAGGGTTTGGAATTCCTCATAGATGTCAAGTTGCAGGAAGATACTTCATTCCTTGTTCAGATTGAACTAGCATCAACAAAGGCACCAGCATTAGCCAAGAAGAAGTTCATGATACCATACAGGCACCAGGGGATCATCCCACCAATCGATTTCAACAGCTTAGAAGAAGGCATCAAACACTGTCTCAAAATAATGTACAAAGAGTCTACAATTGGGGAATTCAAGCAAGAAGATATGGTACAAGTTATAGATATCCTCATGATGGAAGAAGCACCAGTAGAGGATATAGATGTAGGGGATGAATACGATGTATTTATAAACTCCAGTGTATGA
Protein Sequence MTIKYNNMKGLEFLIDVKLQEDTSFLVQIELASTKAPALAKKKFMIPYRHQGIIPPIDFNSLEEGIKHCLKIMYKESTIGEFKQEDMVQVIDILMMEEAPVEDIDVGDEYDVFINSSV

References More References in PubMed

1

First Report of Tomato yellow leaf curl China virus with Betasatellite Infecting Panax notoginseng.

Li XJ, et al.  Plant Dis. 2014 Sep;98(9):1284. doi: 10.1094/PDIS-03-14-0255-PDN.

PMID: 30699620

2

Identification and Analysis of Potential Genes Regulated by an Alphasatellite (TYLCCNA) that Contribute to Host Resistance against Tomato Yellow Leaf Curl China Virus and Its Betasatellite (TYLCCNV/TYLCCNB) Infection in Nicotiana benthamiana.

Luo C, et al.  Viruses. 2019 May 15;11(5):442. doi: 10.3390/v11050442.

PMID: 31096636

3

ty-5 Confers Broad-Spectrum Resistance to Geminiviruses.

Ren Y, et al.  Viruses. 2022 Aug 17;14(8):1804. doi: 10.3390/v14081804.

PMID: 36016426

4

Association of an alphasatellite with tomato yellow leaf curl virus and ageratum yellow vein virus in Japan is suggestive of a recent introduction.

Shahid MS, et al.  Viruses. 2014 Jan 14;6(1):189-200. doi: 10.3390/v6010189.

PMID: 24424499

5

Identification of a novel pepper-infecting monopartite begomovirus in China.

Li P, et al.  Arch Virol. 2021 Jun;166(6):1751-1754. doi: 10.1007/s00705-021-04989-0. Epub 2021 Mar 20.

PMID: 33743050

6

Characterization of alphasatellites associated with monopartite begomovirus/betasatellite complexes in Yunnan, China.

Xie Y, et al.  Virol J. 2010 Aug 3;7:178. doi: 10.1186/1743-422X-7-178.

PMID: 20678232

7

Divergent Symptoms Caused by Geminivirus-Encoded C4 Proteins Correlate with Their Ability To Bind NbSKη.

Mei Y, et al.  J Virol. 2020 Sep 29;94(20):e01307-20. doi: 10.1128/JVI.01307-20. Print 2020 Sep 29.

PMID: 32759325

8

A recombinant begomovirus resulting from exchange of the C4 gene.

Xie Y, et al.  J Gen Virol. 2013 Aug;94(Pt 8):1896-1907. doi: 10.1099/vir.0.053181-0. Epub 2013 May 29.

PMID: 23720217

9

A diverse set of miRNAs responsive to begomovirus-associated betasatellite in Nicotiana benthamiana.

Xiao B, et al.  BMC Plant Biol. 2014 Mar 11;14:60. doi: 10.1186/1471-2229-14-60.

PMID: 24618068

10

A naturally occurring defective DNA satellite associated with a monopartite begomovirus: evidence for recombination between alphasatellite and betasatellite.

Huang C, et al.  Viruses. 2013 Sep 6;5(9):2116-28. doi: 10.3390/v5092116.

PMID: 24018984