Tomato yellow leaf curl Vietnam betasatellite

Basic Information

Abbreviation TYLCVNB
Genebank Accession DQ641714
Isolate VN-Han-05
Download Genome |GFF3 |PEP |CDS

Genome

ACCGGTGGCGAGCGGGGATTTTGCTCCGAAAGTGGGTCCCACTACTCAGAGGAAAGAGAAATTGGGCTTCGGTTATGCAATTGGGCCCTTAAAGTATAGGGTTTTTACAAAATGGACCCTGGATATTGGGCTTAAATTCATTAAACATCATGGGCTTGAAGAAATCCATTTATTCAGCATATTTATTATACATACGTGTAAATACGTATTTATACATGTAAATACGTATTTATACATTGGTATTCATAAATACATCATATTCATCTCCTATATTAATATCATCAACAGGTGCGTCGTGCATCATCATGATATCAATAGTCTCTATCATATCCTCTTGCTTGAATTCTGTTATGGTCGATTCTTTGTACATCACATCTAGCAAGTTTTTAATCCCTTCTTCCAAGCCGTTGAAGTTGAAAGGTGGAATGATTCCACTGTGCCTGTATGGGATCATGAATTTCTTCTTGGCTAGTGCTGGTGACTTGGTTGAGATAAGTTCAATCAAGACAAGGATTGAACTATCTTCATTTAGCCTTACATTGATAATGAATTCCATGCCCTTCTTGTTGTTGTACTTGATCGTCATTTTTATGTGTGTTCAACCATACATGAGTCTTTCTGGGTTAAATATGGATTTAGATATTTGATTCATGGACGTGAATCAAATACGTGTTTTGTTGATGCTCATATAGTTATAAGTGGATGTATCATTCATGATAGTGACCTAAATGTTAACATGATTGTGATGTTAAAAATATCTACTAATCTAGATTAGTAGATAATCAGATAAAAAGAAGAAGAATAATCCTCGGGATTAAGAAAAAAAAAAGAAAAAAGAACAAATAAAAAAAAAACATGAGTCCAAGCACAAACAAATATCTATTAAGAAAAAAAAGGGAGCGCAGCGGAAACAAAAAACAAACAAAACTGAAACGCATTAAAATAAATCAAAATAAAAAATAGAAGAAGAAAACAATATACATCAAAAAAAAAAAGAAAAAGAAAAGAAATCACTCAATTTTTTACTGCCCAGTAAAAAATAAATTACTTTCACCTCGGAGGTAAATAATTGAGTCCCCAATAGGTAAATGAGGCACCGATATATCGGTGCCTCTATTGGTGACTAATAAAGTAATTGACTAAACTACCCCTGCTTTTATGTTATTCAGGCGCGTTGGAGTGCGCTGAAAAAGTGAACATTCTCTCTCCTAAACTCGTCGGAGAAGACGATTGAGGCACTTCCCGGCATCAATTTGCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGAAACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCACCGTTATAATATT

Gene Information

NCBI Accession ABG26124.1
Location 230-586
Gene Name C1
Protein Name C1 protein
Coding Region ATGACGATCAAGTACAACAACAAGAAGGGCATGGAATTCATTATCAATGTAAGGCTAAATGAAGATAGTTCAATCCTTGTCTTGATTGAACTTATCTCAACCAAGTCACCAGCACTAGCCAAGAAGAAATTCATGATCCCATACAGGCACAGTGGAATCATTCCACCTTTCAACTTCAACGGCTTGGAAGAAGGGATTAAAAACTTGCTAGATGTGATGTACAAAGAATCGACCATAACAGAATTCAAGCAAGAGGATATGATAGAGACTATTGATATCATGATGATGCACGACGCACCTGTTGATGATATTAATATAGGAGATGAATATGATGTATTTATGAATACCAATGTATAA
Protein Sequence MTIKYNNKKGMEFIINVRLNEDSSILVLIELISTKSPALAKKKFMIPYRHSGIIPPFNFNGLEEGIKNLLDVMYKESTITEFKQEDMIETIDIMMMHDAPVDDINIGDEYDVFMNTNV

References More References in PubMed

1

Isolation and molecular characterization of a distinct begomovirus and its associated betasatellite infecting Hedyotis uncinella (Hook. et Arn.) in Vietnam.

Du Z, et al.  Virus Genes. 2014 Jun;48(3):557-61. doi: 10.1007/s11262-014-1043-2. Epub 2014 Feb 8.

PMID: 24510306
2

A novel East African monopartite begomovirus-betasatellite complex that infects Vernonia amygdalina.

Mollel HG, et al.  Arch Virol. 2017 Apr;162(4):1079-1082. doi: 10.1007/s00705-016-3175-2. Epub 2016 Nov 29.

PMID: 27900540