Tomato yellow leaf curl Thailand betasatellite

Basic Information

Abbreviation TYLCTHB
Genebank Accession AJ566746
Isolate CN-Yn72-02
Download Genome |GFF3 |PEP |CDS

Genome

ACCGGTGGCGAGCGGATTTTTTGGTGTTCATGTGGGTCCCACTTGGGAAATGTGCAGAATAACTGGGCCTGTTTTCTTAATTGGGCCTTATATGACTTGGGCATTTGACTGTATTTGGATTAGGCTTTATATATAAGACGAAGTTGGGCCAAATTGAATAGTGATTTTATTCATTTAACATTTTATTTATTACATGGAAAATACGTATTTAAACAGATGAGTTCGTACAGACATCGTATTCATCCATTACATCAATATCCACCACTGGAGCCTCATTCATCATAACAAGATCGATTATCTCTACTAGGTGCTCTTGCTTAAATTCCCTGATAGATGATTCCTTGTACATCAGATCTATCATGTTTCGTATTCCTTCTTCAAGTGCATTGAAATTGAAGGGTGGTATGATTCCACTATGGCCGTATGGAATCATGAATTGTTTTGTTGCTAATACTGGGGAGCCTGTTGAGAAGAGTCTAATATGAACTAATATTGAGGAGTCCTCCTTCAATCGCACGTTGATGATGAATTCCATTCCTTTCTTGTTCTTGTATTTGATCGTCATTGTTCATATGTGCTTGAGCTTTGATCTTCCATACCAGTTAAATAGATAAGAAGCTGTGTTTATATGGTTATTGTTTAGTTACGTGTTTCTTGCTTGTTCATATGTTTGGTAGTGGAGATATTTTGTATGAGATGTGACGTTGTTTTTAATGGTGTGGTTAATATGTAATTAGAAAAATGTATTGTTAGACGTTAGTACTAATCATAACATGATTAGGAAAGAAGAAAAGAAAAAAAAATGAAATTAAATCCTATAAAACTCATAATATCCATTATCCTAAAATGGGAGCGCAGCGAAACGAAAAACAAAAACAGGAAAAAGATGGAAAAATAAAAACAGAAATTAACTGAATCACTGACAATCATAAAAAACTAAGAAATAAATTCAGTGGACCCCACTGAATTAAAAATAAAAAAAAAAGAATTAATTGATTTACCACGCGGTAAATCAGTAATTAATAATTACTTAGGTGAATGGGTAAAAAAATGAGACCCCAATAGGTAAATGAGACCCCGATATATCGGGGGCTCAATTGGGTGCTCTTAATTTACTTTCCCATAATACCCCTGCCCCTGTGTCTGGTAGACGCGTGAGAGTGGACTGAAAAAGTAGAGTTTCTCTCTCCAAAAACTCCTCCGACCTCCGATTCAGGCACTTCCGGTCACCAATTTGCGACACGCGCGGCGTTGTGTACCCCTGGGAGGGTAGAAACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCACCGTTATAATATT

Gene Information

NCBI Accession CAD97705.1
Location 209-565
Gene Name C1
Protein Name putative C1 protein
Coding Region ATGACGATCAAATACAAGAACAAGAAAGGAATGGAATTCATCATCAACGTGCGATTGAAGGAGGACTCCTCAATATTAGTTCATATTAGACTCTTCTCAACAGGCTCCCCAGTATTAGCAACAAAACAATTCATGATTCCATACGGCCATAGTGGAATCATACCACCCTTCAATTTCAATGCACTTGAAGAAGGAATACGAAACATGATAGATCTGATGTACAAGGAATCATCTATCAGGGAATTTAAGCAAGAGCACCTAGTAGAGATAATCGATCTTGTTATGATGAATGAGGCTCCAGTGGTGGATATTGATGTAATGGATGAATACGATGTCTGTACGAACTCATCTGTTTAA
Protein Sequence MTIKYKNKKGMEFIINVRLKEDSSILVHIRLFSTGSPVLATKQFMIPYGHSGIIPPFNFNALEEGIRNMIDLMYKESSIREFKQEHLVEIIDLVMMNEAPVVDIDVMDEYDVCTNSSV

References More References in PubMed

1

Predominance of tomato leaf curl Gujarat virus as a monopartite begomovirus: association with tomato yellow leaf curl Thailand betasatellite.

Jyothsna P, et al.  Arch Virol. 2013 Jan;158(1):217-24. doi: 10.1007/s00705-012-1468-7. Epub 2012 Sep 15.

PMID: 22983111
2

Differential pathogenicity among Tomato leaf curl Gujarat virus isolates from India.

Ranjan P, et al.  Virus Genes. 2013 Dec;47(3):524-31. doi: 10.1007/s11262-013-0977-0. Epub 2013 Sep 12.

PMID: 24026875
3

Molecular characterization of Chilli leaf curl virus and satellite molecules associated with leaf curl disease of Amaranthus spp.

George B, et al.  Virus Genes. 2014 Apr;48(2):397-401. doi: 10.1007/s11262-013-1027-7. Epub 2013 Dec 25.

PMID: 24368759
4

Identification and characterization of Ageratum yellow vein Malaysia virus (AYVMV) and an associated betasatellite among begomoviruses infecting Solanum lycopersicum in Malaysia.

Mahmoudieh M, et al.  J Appl Genet. 2020 Dec;61(4):619-628. doi: 10.1007/s13353-020-00574-4. Epub 2020 Aug 17.

PMID: 32808206
5

Xanthium strumarium: a weed host of components of begomovirus-betasatellite complexes affecting crops.

Mubin M, et al.  Virus Genes. 2012 Feb;44(1):112-9. doi: 10.1007/s11262-011-0662-0. Epub 2011 Oct 4.

PMID: 21969121