Tomato yellow dwarf betasatellite

Basic Information

Abbreviation ToYDB
Genebank Accession AB294512
Isolate JP-pTKbeta-1-00
Download Genome |GFF3 |PEP |CDS

Genome

ACCGGTGGCGAGTTGGGTATCGAGGGGGAAAGGTGGGCCCCACCTTTCTGCATAAGTTTGGGTTTATTGCAGTTTGAGTCCCTGTAGTTTGCTTTATTCATTTTTACACCCTAAAAATGAATGTAATTAATAATAAAATAAAATTAATCATTAATTTTATTTACACGGAGATACGCAATACATTGCGTATCGTAGTACATGTTATTTATACGGTATTTCTGCATCGTATAGTATATCTATCTACTGTATCTACCCCCATATGACCTAACCAGTGCATCATGACCATATCAATTGAGTCAATCATCTCCTCTTGCTTGAAATTAGAGATGTCTGAATCCTCGTACATCAATTCCAGTGTCTCCCTGATGAGCTCTTCTGCCCCGTTGAAGTCAAATGGTGGAACCATCTGGACGTACGTGTATGGGATATGGCATTTGAAACCAGTCAAGACTGGTTTATTTGTTGAGTATACTTGGACTATGACCTTGAGGAGCTGGTGAAGCCTGACGTCTACGATGAACTTGATGCCCTTGCCGTTATTATATGTGATCGTCATCTCTGATCTTTGTGATTTATGGTCCTCTATATATGCTCTTTATATAGTGGTGGTTTGTGGGTTGTGTGTCCCAATTTGGTCCATGTATTTGTGCTTGGATATCCTGGGAGTGTTGTTTCCTATTATTCCCCTATTGCGCCGTATATCTGAAAGATAATCAGAAAGAGAAAAAGAAAAATGGAATCAAAGAGAAAAGAAAATTAAAAAAAGAAAACAAATAACACTAAAAAGAACATATACATCTATTCCGGCCTAAAGGGAGCGCAGCTCAACTGTTAAAAAAAATAAAAAATGAAAGAAAATCAAAGAGAGAAGAAAAAGAATTAAAAAAAAGAAGAAAAAAGAAAGAAAAACAAAAAAGATGTGAAAATAAAATTAAATCAAAGAGAAAAGAAAATTAAATGAAGCCCATTTAATTTATCTTTGAAAGAAAGAAGCCCAGTTATTTTGCCCGGCCCACTATCCAGAATCCGAATATGACTGTTCACGATAATTACAAATATGCCATTGTACCCCAATACCCCCTTACACTAATATGTACCCTGATATATCGGGGTACAGATGTCCGTACTAATTCCTTTGGACAAAAATACCCCCGCAAAGCAGATAGAACAGGCGCGTGGGAGTGCGGTGCAAAAGTGCTTTTCTCTCTCCTCAAACCTGCCGGAGACGACGATCGGAGGCCTTCCGGTCATCATTTTCCGACACGCGCGGCAGTGCGAACACGGAGGTGGGCAAATCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCCTAGCTCGCCACCGTTATAATATT

Gene Information

NCBI Accession BAF75929.1
Location 206-556
Gene Name betaC1
Protein Name betaC1 protein
Coding Region ATGACGATCACATATAATAACGGCAAGGGCATCAAGTTCATCGTAGACGTCAGGCTTCACCAGCTCCTCAAGGTCATAGTCCAAGTATACTCAACAAATAAACCAGTCTTGACTGGTTTCAAATGCCATATCCCATACACGTACGTCCAGATGGTTCCACCATTTGACTTCAACGGGGCAGAAGAGCTCATCAGGGAGACACTGGAATTGATGTACGAGGATTCAGACATCTCTAATTTCAAGCAAGAGGAGATGATTGACTCAATTGATATGGTCATGATGCACTGGTTAGGTCATATGGGGGTAGATACAGTAGATAGATATACTATACGATGCAGAAATACCGTATAA
Protein Sequence MTITYNNGKGIKFIVDVRLHQLLKVIVQVYSTNKPVLTGFKCHIPYTYVQMVPPFDFNGAEELIRETLELMYEDSDISNFKQEEMIDSIDMVMMHWLGHMGVDTVDRYTIRCRNTV

References More References in PubMed

1

Interaction of tomato yellow leaf curl virus with diverse betasatellites enhances symptom severity.

Ito T, et al.  Arch Virol. 2009;154(8):1233-9. doi: 10.1007/s00705-009-0431-8. Epub 2009 Jul 3.

PMID: 19575277
2

Genetic diversity of begomoviruses infecting tomato plant in Saudi Arabia.

Sohrab SS.  Saudi J Biol Sci. 2020 Jan;27(1):222-228. doi: 10.1016/j.sjbs.2019.08.015. Epub 2019 Aug 22.

PMID: 31889840