Chili leaf curl betasatellite

Basic Information

Abbreviation ChLCuB
Genebank Accession AJ316032
Isolate PK-MC-97
Download Genome |GFF3 |PEP |CDS

Genome

ACCGTGGGCGAGCGCTGTTTTTGGCGTCCGAGGTGGGTCCCACAATATCCAAATGAGGAAATGGTAATTGGGTCAATGCAATTGGGCCTGAATTGAAATGGGCTGTGACCAGTAGATTCGAGACTGGGCCAATATAATAAAATAAGAAATGGGTTCACAAACAAAACAAAGGCTTTATTCATCTCAAATATACTACACACTCACACACACACATTCGTACATACATCATATTCATCTGCTATACGTATATCAATTACTGAGGCCTCATGCATCATCAACATATCAATAGTCTCCACCATGTCTTCTTGTCTAAACTCTCCTATTCGAGAATCCTTGTACATGACCTTCAAAATATTATGTATCCCCTCTTCCAAAATGTTAAAGTCGAAAGGTGGTATAATCCCATCATGGCCGTATGGTATCATGAAGGTCTTCTTTGCCAGGGCAGGGGATCGTGTTGAGCACAATTCAACGAGGACAAGAATTGAATTGTCCTCGTTGATCTTCACGTCGATCCTAAACTCCATCCCCTTCTCGTTATTATATTTGATCGTCATTTGCATGTAAATATGAACTATACATGAGTCTTGTCGTCTTAAATAGTGGCCATATATCTGGATATATGGACATAATTCATATACGTGGTGCATTAATTATCATATGAATCTGAGTGGAGATAGATATGGTTGATAGTGACAAAACTATCAATCATGTGATCTAGATGAAAGAAAAATAAAACCTAATCATCGTCATGATTAGGTAAAGAGAAAAAAAGTAAAGAGAAAAATGAATCCAGAAGAATTCAGGAGATAAAACAAAAGTAAAAGGAAGAAAGATAAAAAAATAAAACATGAAATGAAACCAGAAACATGGGAAGAAACAAAAATCCCATGAGAAAATATGGAAGCGCAGCGGACAAGAACACAAAAGTGAAAGAAACGGAGATCATGAGGAAAAAAGGAAGAACACAAAACTAAACTAAGAGGGTCGTACATGAAAATACACAAAGTCCGTACACAGTAATTAAGCATTAATTACTGCTCAGTAAATGTGAATAAAATTAACCCATGGGTTAATTTTGTTGTCCACCAATAGGTAAATGTCCACCATTGTGTCCCCCAATACATTTGGGGGACATTGGGGGCTCGGAAAGACAAAGAAATCCCGGATTCTCAAAATACCCTTAAATATGTGTCTGGAAGGCGCGTGGTAATGCGCTGAAAAAGGTGACTTTCTCTCTTCTAAACTCACCGGAACGGCCAACTGGCTGTTTCCGGTGTCAGTTTTCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTGAGCTCGCCCACGTTCTAATATT

Gene Information

NCBI Accession CAC87058.1
Location 201-650
Gene Name C1
Protein Name putative C1 protein
Coding Region ATGCACCACGTATATGAATTATGTCCATATATCCAGATATATGGCCACTATTTAAGACGACAAGACTCATGTATAGTTCATATTTACATGCAAATGACGATCAAATATAATAACGAGAAGGGGATGGAGTTTAGGATCGACGTGAAGATCAACGAGGACAATTCAATTCTTGTCCTCGTTGAATTGTGCTCAACACGATCCCCTGCCCTGGCAAAGAAGACCTTCATGATACCATACGGCCATGATGGGATTATACCACCTTTCGACTTTAACATTTTGGAAGAGGGGATACATAATATTTTGAAGGTCATGTACAAGGATTCTCGAATAGGAGAGTTTAGACAAGAAGACATGGTGGAGACTATTGATATGTTGATGATGCATGAGGCCTCAGTAATTGATATACGTATAGCAGATGAATATGATGTATGTACGAATGTGTGTGTGTGA
Protein Sequence MHHVYELCPYIQIYGHYLRRQDSCIVHIYMQMTIKYNNEKGMEFRIDVKINEDNSILVLVELCSTRSPALAKKTFMIPYGHDGIIPPFDFNILEEGIHNILKVMYKDSRIGEFRQEDMVETIDMLMMHEASVIDIRIADEYDVCTNVCV

References More References in PubMed

1

An Overview of Chili Leaf Curl Disease: Molecular Mechanisms, Impact, Challenges, and Disease Management Strategies in Indian Subcontinent.

Shingote PR, et al.  Front Microbiol. 2022 Jun 29;13:899512. doi: 10.3389/fmicb.2022.899512. eCollection 2022.

PMID: 35847087
2

betaC1 of chili leaf curl betasatellite is a pathogenicity determinant.

Tahir MN, et al.  Virol J. 2011 Nov 8;8:509. doi: 10.1186/1743-422X-8-509.

PMID: 22067326
3

Chili leaf curl betasatellite is associated with a distinct recombinant begomovirus, Pepper leaf curl Lahore virus, in Capsicum in Pakistan.

Tahir M, et al.  Virus Res. 2010 Apr;149(1):109-14. doi: 10.1016/j.virusres.2009.12.007. Epub 2010 Jan 15.

PMID: 20079779
4

Genetic diversity and distribution of a distinct strain of Chili leaf curl virus and associated betasatellite infecting tomato and pepper in Oman.

Khan AJ, et al.  Virus Res. 2013 Oct;177(1):87-97. doi: 10.1016/j.virusres.2013.07.018. Epub 2013 Jul 30.

PMID: 23911631
5

Identification of Chilli leaf curl virus and associated betasatellite infecting Osteospermum fruticosum in Rajasthan, India.

Mishra M, et al.  3 Biotech. 2020 Apr;10(4):169. doi: 10.1007/s13205-020-2159-9. Epub 2020 Mar 16.

PMID: 32206503
6

Molecular and biological characterization of Chilli leaf curl virus and associated betasatellite infecting Cucurbita maxima in Oman.

Shahid MS.  Virusdisease. 2020 Sep;31(3):378-382. doi: 10.1007/s13337-020-00601-2. Epub 2020 May 29.

PMID: 32904994
7

Molecular analysis, infectivity and host range of Tomato leaf curl Karnataka virus associated with Corchorus yellow vein mosaic betasatellite.

Dokka N, et al.  Virus Res. 2021 Oct 2;303:198521. doi: 10.1016/j.virusres.2021.198521. Epub 2021 Jul 24.

PMID: 34314770
8

Characterization of a new begomovirus and betasatellite associated with chilli leaf curl disease in India.

Khan ZA, et al.  Arch Virol. 2017 Feb;162(2):561-565. doi: 10.1007/s00705-016-3096-0. Epub 2016 Oct 13.

PMID: 27738844
9

Molecular and biological characterization of Chilli leaf curl virus and associated Tomato leaf curl betasatellite infecting tobacco in Oman.

Shahid MS, et al.  Virol J. 2019 Nov 9;16(1):131. doi: 10.1186/s12985-019-1235-4.

PMID: 31706358
10

Complexity of begomovirus and betasatellite populations associated with chilli leaf curl disease in India.

Kumar RV, et al.  J Gen Virol. 2015 Oct;96(10):3143-3158. doi: 10.1099/jgv.0.000254. Epub 2015 Aug 4.

PMID: 26251220