Tomato leaf curl Sri Lanka betasatellite

Basic Information

Abbreviation	ToLCSLB
Genebank Accession	AJ542493
Isolate	SL
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGGGGGCGAGCGGTGTTTTTGGTGACAAAGTGGGTCCCTTTGGAAATGACGTCAGTTATTGGGCTTGTTTTGTCATTGAGCCTTCAAATAAAGTTGGGCTTATTAATAATCTATTTTAATTGGGCCTTTTCAAAATATAAGATGGTAACTAAATAATTATTCATTATATATAAAATACGTATTTAGAATATGTATTTATACAGATACATGAGTATACACGTCATATTCATCTGATACATTAATATTTATCACTGGAGCTTCTTGCATCATGAAAATATCAACAATTTCTATCATGTCTTCCTGCTTGAATTCTCCGATGGGGGAATCTTTGTACATGATTTTTATTATGTTGGTGACTCCCTCCTCTAGGCTGTTGAAGTCGAAAGGTGTTATGATTCCTGCGTGGCTATACGGAATCATTAATTTCTTCCTGGCTAGTGATGCTGACTGTGTTGAGAATATCTGTATTTGAACTGAAATTTTATCTTCTTGCATTAGTTTGACGTCTACTATGAATTTCATGCCTTTGTTGTTGTTGTATTTGATTGTCATTTTGGTTGTTCTTCTAAATATGTATTATGATCGCTTAAATAAGGGATATATTTAGTGTATGTGGAGAATAACAATTTACGTGGTTTAATGTTAATCATATAATGTAAAGTGTTCATGATTAAGGTTGACGGTGACTATTCATATAAAGATTTTAGAAATATAAAGAAAACAATCCTAATCATGAACATGATTAGGAGCAGGAAAAAAAGGAAGGAGAACTTGAGCAAATAAAATTAATTTGAGGAAAGAAATGAAAACAAAAAAATAAAAAAAAGATCAAAAATACTAAAAATATAAAACACAGAATCATATACCTACATGAAAAAATGGGAGCGCAGCGAAACGAACAAAAAAAGACTGCATAAAAAGACTTCAAACTGATGAAATCATGAGAAAAAAAGAAAATAAAAAAAGAAGAAAAAAATGAATAAATATGAAGATATTTATGAGTCTGGATGATTTTTATGTTAAATTATGTTTTTACCATTTTACTGCGGTAAAATGGTAAATGAGTTTACTGATCAAGGTAAATTGGACACCGATAGGTAAATGAGACACCGATATATCGGTATCCCAATTGGTATCCGTTATTTCTCTTTCCCAAAATACCCCTGTCTCTGTGTCTGATAGGCGCGTGCTATTGCTCTGAAAAAGTTAGTTTTCTCTCTCCTAAAACTTAACGGAATTCCGATTCAGGCACTTCCGGTCATCAATTCACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCCCGTTCTAATATT

Gene Information

NCBI Accession	CAD65758.1
Location	198-554
Gene Name	C1
Protein Name	C1 protein
Coding Region	ATGACAATCAAATACAACAACAACAAAGGCATGAAATTCATAGTAGACGTCAAACTAATGCAAGAAGATAAAATTTCAGTTCAAATACAGATATTCTCAACACAGTCAGCATCACTAGCCAGGAAGAAATTAATGATTCCGTATAGCCACGCAGGAATCATAACACCTTTCGACTTCAACAGCCTAGAGGAGGGAGTCACCAACATAATAAAAATCATGTACAAAGATTCCCCCATCGGAGAATTCAAGCAGGAAGACATGATAGAAATTGTTGATATTTTCATGATGCAAGAAGCTCCAGTGATAAATATTAATGTATCAGATGAATATGACGTGTATACTCATGTATCTGTATAA
Protein Sequence	MTIKYNNNKGMKFIVDVKLMQEDKISVQIQIFSTQSASLARKKLMIPYSHAGIITPFDFNSLEEGVTNIIKIMYKDSPIGEFKQEDMIEIVDIFMMQEAPVININVSDEYDVYTHVSV

References More References in PubMed

1	A new begomovirus-betasatellite complex is associated with chilli leaf curl disease in Sri Lanka. Senanayake DM, et al. Virus Genes. 2013 Feb;46(1):128-39. doi: 10.1007/s11262-012-0836-4. Epub 2012 Oct 23. PMID: 23090833
2	An Overview of Chili Leaf Curl Disease: Molecular Mechanisms, Impact, Challenges, and Disease Management Strategies in Indian Subcontinent. Shingote PR, et al. Front Microbiol. 2022 Jun 29;13:899512. doi: 10.3389/fmicb.2022.899512. eCollection 2022. PMID: 35847087
3	Diversity and phylogeography of begomoviruses and DNA satellites associated with the leaf curl and mosaic disease complex of eggplant. Venkataravanappa V, et al. Microb Pathog. 2023 Jul;180:106127. doi: 10.1016/j.micpath.2023.106127. Epub 2023 Apr 28. PMID: 37119939
4	Molecular characterization of a new begomovirus infecting Synedrella nodiflora in South India. Das S, et al. Arch Virol. 2018 Sep;163(9):2551-2554. doi: 10.1007/s00705-018-3861-3. Epub 2018 May 9. PMID: 29744588