Tomato leaf curl Philippine betasatellite

Basic Information

Abbreviation ToLCPHB
Genebank Accession AB308071
Isolate PH-Lag1-06
Download Genome |GFF3 |PEP |CDS

Genome

ACCGGGGGCGAGCGGATTTTTTGGTGCTCAAGTGGATCCCACGAGAGTTGGGGACGATAAAAGCTCGATACATGGGCCTGATTTTCTGGGCTCTTGGATTGGGCTTCCAATTAAATATTGGGCTGTTGACATTTAATTTTGCTAGAATAGAAATACATGTACTCTGTAGATGTATTTCAATACGTATTTTATTCATTCAAGAGATATACATACTTTTAGATATTCGTAGTTGAATACACGTTAAATTTCTCTCCTATGTTAATGTCTACTACAGGGGCCTCGTTCATCATGAGTATGTCTATTGATTCGACCATGTCTTCGTGCCTGAATTCCTCTGCTGGTGAGTCTGCATACATGATGTTGATTAGGCCTTTTATTCCTTCCTCTAGGTCGTTGAAGCCGAAGGGGGCTATGATTCCTTGGTGTCCGTATGGTATTATGAATTGTTCCTTGTGGAGAAATGGTTTTTTTGTCAAGAAGAGATCAATCTCGACGGAGATCGAGTTCTCTCTTCTTAGCCTGACGTTGATTACGAATGACATACCCTTGGTGTTTTTGTATGTGATCGTCATTTTTGTCGTTGCGATGTTCTCTTCCTGGGATGTCGATTTATATTGGTTGGATGAGGTTCGTGTGTTTGCTATGGTTCTACGTGTTTAATTTTGGATCATATGGTAACAAAATATCTAGATATTTTGAAATTGACGTTGATTATTTGTTCCAGCTAATTAAATTAGTTAGCTATGATTATCTCCCAATCATATACTTGGATTGGGTGAAAAATAAAGAAAAAAATAAAAATAAAATAAACAAGACAAAGAAAATTAAAGACAACATACATCTCTTATGGAAGAATTGCCGCGCAGCGGAAAACAAAAAAAAAATCAAATAAAACAAAGTAAAAAAATAAAGAAAATGTCTTTCGTATTAGAAATACGAATGAAAATAAAGAAAAAAGAAAATGGGTCTTATTGGAAAAACACGTGATCATGGTAAAAATAGAATTACTGCGGTAATTCTAGAGTTACTATTTAACTCGGGTTAATATATAGGGTAAATGAGACACCAATGGGTAAATTGTACTCCGATATATCGGAGATCAATTGGAACCCATATTTTGCATTTCCCATTTTGCCCTTAAACATGTGTCTGGTAAGCGCGTGGGAGTGGACTGTAAAAGTAGATATTCTCTCTCCAAAACTCCCCGGAGACGATGAAACTCGGTCTTCCCGGCCTCAATTTGCGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCCCCGTTCTAATATT

Gene Information

NCBI Accession BAF63877.1
Location 216-572
Gene Name C1
Protein Name C1 potein
Coding Region ATGACGATCACATACAAAAACACCAAGGGTATGTCATTCGTAATCAACGTCAGGCTAAGAAGAGAGAACTCGATCTCCGTCGAGATTGATCTCTTCTTGACAAAAAAACCATTTCTCCACAAGGAACAATTCATAATACCATACGGACACCAAGGAATCATAGCCCCCTTCGGCTTCAACGACCTAGAGGAAGGAATAAAAGGCCTAATCAACATCATGTATGCAGACTCACCAGCAGAGGAATTCAGGCACGAAGACATGGTCGAATCAATAGACATACTCATGATGAACGAGGCCCCTGTAGTAGACATTAACATAGGAGAGAAATTTAACGTGTATTCAACTACGAATATCTAA
Protein Sequence MTITYKNTKGMSFVINVRLRRENSISVEIDLFLTKKPFLHKEQFIIPYGHQGIIAPFGFNDLEEGIKGLINIMYADSPAEEFRHEDMVESIDILMMNEAPVVDINIGEKFNVYSTTNI

References More References in PubMed

1

Molecular analysis of new isolates of Tomato leaf curl Philippines virus and an associated betasatellite occurring in the Philippines.

Sharma P, et al.  Arch Virol. 2011 Feb;156(2):305-12. doi: 10.1007/s00705-010-0837-3. Epub 2010 Oct 30.

PMID: 21053032
2

Interaction of tomato yellow leaf curl virus with diverse betasatellites enhances symptom severity.

Ito T, et al.  Arch Virol. 2009;154(8):1233-9. doi: 10.1007/s00705-009-0431-8. Epub 2009 Jul 3.

PMID: 19575277
3

Isolation and molecular characterization of a distinct begomovirus and its associated betasatellite infecting Hedyotis uncinella (Hook. et Arn.) in Vietnam.

Du Z, et al.  Virus Genes. 2014 Jun;48(3):557-61. doi: 10.1007/s11262-014-1043-2. Epub 2014 Feb 8.

PMID: 24510306