Tomato leaf curl Patna betasatellite

Basic Information

Abbreviation ToLCPaB
Genebank Accession EU862324
Isolate IN-Pat-07
Download Genome |GFF3 |PEP |CDS

Genome

ACCGGGGGCGAGCGATGTTTTTGGTGTTCGAGGTGGGTCCCACTTTCTTCTGAAGAAGAAAGGTTGACTGGGTCAATGCAATTGGGCCGCAATTTGATGGGCTTTGGTTATTGGGTTTCGTTATTGGACTCATAAAATAATTAAAATTAAAATTTTATTAACATCTCATACAAATACATCCCGTACACGTATTCATACACTTGCACGCGTATACACACTGTACAAATCATGTATATTAATATCAATCACTGGAGCCTCGTGCATCATCAGGATATCAATAGTCTCGACCATGTCTTCTTGCCGGAATTCTCCTGTGTGTTTATCCTTGTACATGACCTTCAACAGTTGACATACCCTTTCTTCAAGACGGTTGAAGTCAAATGGACCTGTGAACCCATGATGGCCGTATGGGATCAAGAACTTGGTCTTGGCTAGTGCCGGTGACCGTGTGGATACCAAATCCACCTGAACGATGATGGAATAATTGTTGCTCAACCTCACATTCACAGTGAACTCCATCCCTCTCTTATTATCATATGTGATCGTCATTGTTAATTCTATGGGTCTAAACATGAGTTTAGTCCCCTTAAATAGGGTTCATATATCTGGATTATGGACCAAGTCAATTACGTGGTCTGGTCTATGTCACATATATTATGTGAAGACCTTATGTTTGATAGCGACAACACTATCAAATATCTAAAAATGAAAAAGAAAAGAAAAAACATAATTATAAAATAATTATGAATAATGAGAAAAGGAAAAAAAAACAAACATTAAACAAATCACTAAACAAAACCTAAACAAACACTAACACACTCACAATATATATTAAGAAAAGAAAAGGGAGCGCAGCGACGAAACAAACAAGAACTGACAACAACAAAAAAAAACATCAAAAAAAAATAAAAAGAAAAGAAAAACAAAATCATGAATGATTGGGCCCTACAATCATGAATAGTTTAATCCGTATACATGAGTCATTTACTGTTTTACTGCACGGTAAAATAGTAAACTATATTTACCCCATGGTAAATATCTGAGTACCAATAGGTAAATTGATCACCGATACACCGATATATCGGTGCTCAATTGGGTACTCATAAAATAATAAGTCTGACATCCCTAAAATACCCCTATCTCTGTGTCTGGAAGGCGCGTGGGAGTGCGCTGCAAAAGTAGACTTTCTCTCTCCTAAAACTCATCGGAACTCCGATTCCGGCACTTCCGGTCACCATTTTACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCATGGTACACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTCAGCTCGCCCCCGTTCTAATATT

Gene Information

NCBI Accession ACL00857.1
Location 193-573
Gene Name C1
Protein Name C1 protein
Coding Region ATGTTTAGACCCATAGAATTAACAATGACGATCACATATGATAATAAGAGAGGGATGGAGTTCACTGTGAATGTGAGGTTGAGCAACAATTATTCCATCATCGTTCAGGTGGATTTGGTATCCACACGGTCACCGGCACTAGCCAAGACCAAGTTCTTGATCCCATACGGCCATCATGGGTTCACAGGTCCATTTGACTTCAACCGTCTTGAAGAAAGGGTATGTCAACTGTTGAAGGTCATGTACAAGGATAAACACACAGGAGAATTCCGGCAAGAAGACATGGTCGAGACTATTGATATCCTGATGATGCACGAGGCTCCAGTGATTGATATTAATATACATGATTTGTACAGTGTGTATACGCGTGCAAGTGTATGA
Protein Sequence MFRPIELTMTITYDNKRGMEFTVNVRLSNNYSIIVQVDLVSTRSPALAKTKFLIPYGHHGFTGPFDFNRLEERVCQLLKVMYKDKHTGEFRQEDMVETIDILMMHEAPVIDINIHDLYSVYTRASV

References More References in PubMed

1

Two distinct monopartite begomovirus-betasatellite complexes in western India cause tomato leaf curl disease.

Sangeeta, et al.  Virus Res. 2021 Apr 2;295:198319. doi: 10.1016/j.virusres.2021.198319. Epub 2021 Jan 26.

PMID: 33508355
2

A New Begomovirus Species Causing Tomato Leaf Curl Disease in Patna, India.

Kumari P, et al.  Plant Dis. 2009 May;93(5):545. doi: 10.1094/PDIS-93-5-0545B.

PMID: 30764166
3

Molecular characterization of a new species of Begomovirus and betasatellite causing leaf curl disease of tomato in India.

Kumari P, et al.  Virus Res. 2010 Sep;152(1-2):19-29. doi: 10.1016/j.virusres.2010.05.015. Epub 2010 Jun 9.

PMID: 20540978
4

Detection and characterization of a new betasatellite: variation in disease symptoms of tomato leaf curl Pakistan virus-India due to associated betasatellite.

Kumar J, et al.  Arch Virol. 2013 Jan;158(1):257-61. doi: 10.1007/s00705-012-1486-5. Epub 2012 Sep 29.

PMID: 23053516
5

Occurrence of Cotton leaf curl Multan virus and associated betasatellites with leaf curl disease of Bhut-Jolokia chillies (Capsicum chinense Jacq.) in India.

Yogindran S, et al.  Mol Biol Rep. 2021 Mar;48(3):2143-2152. doi: 10.1007/s11033-021-06223-1. Epub 2021 Feb 26.

PMID: 33635470
6

Molecular characterization of a new begomovirus infecting Mirabilis jalapa in northern India.

Kulshreshtha A, et al.  Arch Virol. 2017 Jul;162(7):2163-2167. doi: 10.1007/s00705-017-3330-4. Epub 2017 Mar 24.

PMID: 28342034
7

Geminivirus Betasatellite-Encoded βC1 Protein Exhibits Novel ATP Hydrolysis Activity That Influences Its DNA-Binding Activity and Viral Pathogenesis.

Gnanasekaran P, et al.  J Virol. 2021 Aug 10;95(17):e0047521. doi: 10.1128/JVI.00475-21. Epub 2021 Aug 10.

PMID: 34132576
8

Betasatellite-encoded βC1 protein regulates helper virus accumulation by interfering with the ATP hydrolysis activity of geminivirus-encoded replication initiator protein.

Gnanasekaran P, et al.  J Gen Virol. 2023 Jun;104(6). doi: 10.1099/jgv.0.001866.

PMID: 37326617