Tomato leaf curl Pakistan betasatellite

Basic Information

Abbreviation	ToLCuPKB
Genebank Accession	LN811050
Isolate	PK-HZ3-15
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGGTGGCGAGTTGGATTTTTTTGCGTCGTTGTGGGTCCCACCTGATAGATCTGCAGAGATAATGGGCCTGAAATGCAATTGGTCCTGAATTGAAATGGGCTTGGACCAGTAGATTCGGGACTGGGCCAATACAATAAGATAAGAAATGGGTTCTTAAATTAAAACAAAGATTTATTCATTTCAAATGCATTACACACTCACACACACACATTCGTACATACATCGTATTCATCTCCTATACGTATATCAACTAATGGAGCTTCTTCCATCATGAGCATATCAATTCCCTCCACCATGTCTTCCTGTTTGAATTCCCATATAGTAGACTCCTTGTACATGAGGGCTAACATGTTGTGTATACCTTCCTCTAGAGCGTTGAAGTCGAACGGAGGTATGATCCCATCATGGCCGTATGGAATCATGAACTTCTTCGTTGTCAGTGCTGGAGATCCTGTTGAGAATAGCTGTATTTGAACCAGAATGGAGTTATCTTCTTTCAATCGGACGTCTATGATGAATTTCATTCCCTTCTGGTTATTGTATTTGATCGTCATTTTGTTGTGTGTGTGTTCATATTTCATGAACACACATTAAATAGAACCAAAAGTTGTGATATATGGTTATGATTGATATACGTGGTTTGGTTATGTTCATATATTTTGTAGTGGAGATATTTTTCATGGATGTTGACGTTGATATTTATTGGTCTTGTAAGACGGAGTTTTAATGAATCCTAATTATGATATAATTAGGAAGAAAGAAAAAAAAAGAAAAAAATGGAAAATCATAAAAAAGATAAAAACCTACATAAACCCTTAATTCTTTTATATGAAAATGGTCGCGCAGCGAAACAGAAAACCGAAACTAACAAAAGAAATGAAAATAAATGAAAAAAGAAATGGAGAAAACGTGAGAAAAACCGAACTCAAAACGAAGACGTTTTGAAGAGGAAAGAAAAAAAAAGAAAATAAAATGAATTTAACATCCATAACAAAAACGCTGTCGTATAAAGGTGACTGGGAGGTTTTACTATTTACTGGGCGGTAAATAGTAAATAAGTTAAAAAGAGTTAATTTTGGAGTACCAATAGGTAAATGTGTCCCCAATATATCGGTACTCAATCGGGGACAGGAGAGAGAAATAATTCCCGCTTTCCTAAAATACCCCCACTTTCGTGTCTGAGAGGCGCGTCGGAGTGCTCTGTAAAAGGTGACCTTCTCTCACCTAAAACTCGCCGGAATGCCCAAACTGGCTGATTCCGGCATCAATTTACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCACCGTTTAATATT

Gene Information

NCBI Accession	CEO91862.1
Location	200-583
Gene Name	betaC1
Protein Name	betaC1 protein
Coding Region	ATGAAATATGAACACACACACAACAAAATGACGATCAAATACAATAACCAGAAGGGAATGAAATTCATCATAGACGTCCGATTGAAAGAAGATAACTCCATTCTGGTTCAAATACAGCTATTCTCAACAGGATCTCCAGCACTGACAACGAAGAAGTTCATGATTCCATACGGCCATGATGGGATCATACCTCCGTTCGACTTCAACGCTCTAGAGGAAGGTATACACAACATGTTAGCCCTCATGTACAAGGAGTCTACTATATGGGAATTCAAACAGGAAGACATGGTGGAGGGAATTGATATGCTCATGATGGAAGAAGCTCCATTAGTTGATATACGTATAGGAGATGAATACGATGTATGTACGAATGTGTGTGTGTGA
Protein Sequence	MKYEHTHNKMTIKYNNQKGMKFIIDVRLKEDNSILVQIQLFSTGSPALTTKKFMIPYGHDGIIPPFDFNALEEGIHNMLALMYKESTIWEFKQEDMVEGIDMLMMEEAPLVDIRIGDEYDVCTNVCV

References More References in PubMed

1	Molecular Signature of a Novel Alternanthera Yellow Vein Virus Variant Infecting the Ageratum conyzoides Weed in Oman. Shafiq M, et al. Viruses. 2023 Dec 4;15(12):2381. doi: 10.3390/v15122381. PMID: 38140622
2	New record of mungbean yellow mosaic India virus in Desmodium laxiflorum and association of bhendi yellow vein mosaic betasatellite in Abelmoschus moschatus in Andhra Pradesh, India. Chowdary VT, et al. Virusdisease. 2022 Mar;33(1):119-121. doi: 10.1007/s13337-021-00749-5. Epub 2022 Jan 27. PMID: 35493751
3	Molecular and biological characterization of Chilli leaf curl virus and associated Tomato leaf curl betasatellite infecting tobacco in Oman. Shahid MS, et al. Virol J. 2019 Nov 9;16(1):131. doi: 10.1186/s12985-019-1235-4. PMID: 31706358
4	First Report of Tomato leaf curl Albatinah virus (ToLCABV) and its Associated Betasatellite Infecting Papaya in Oman. Ammara UE, et al. Plant Dis. 2015 Mar;99(3):421. doi: 10.1094/PDIS-09-14-0912-PDN. PMID: 30699712
5	Detection and characterization of a new betasatellite: variation in disease symptoms of tomato leaf curl Pakistan virus-India due to associated betasatellite. Kumar J, et al. Arch Virol. 2013 Jan;158(1):257-61. doi: 10.1007/s00705-012-1486-5. Epub 2012 Sep 29. PMID: 23053516
6	Tomato leaf curl New Delhi virus: a widespread bipartite begomovirus in the territory of monopartite begomoviruses. Zaidi SS, et al. Mol Plant Pathol. 2017 Sep;18(7):901-911. doi: 10.1111/mpp.12481. Epub 2016 Oct 17. PMID: 27553982
7	Sentinel plot surveillance of cotton leaf curl disease in Pakistan- a case study at the cultivated cotton-wild host plant interface. Iqbal MJ, et al. Virus Res. 2023 Aug;333:199144. doi: 10.1016/j.virusres.2023.199144. Epub 2023 Jun 7. PMID: 37271420
8	Frequent Occurrence of Tomato Leaf Curl New Delhi Virus in Cotton Leaf Curl Disease Affected Cotton in Pakistan. Zaidi SS, et al. PLoS One. 2016 May 23;11(5):e0155520. doi: 10.1371/journal.pone.0155520. eCollection 2016. PMID: 27213535
9	Maintenance of Cotton Leaf Curl Multan Betasatellite by Tomato Leaf Curl New Delhi Virus-Analysis by Mutation. Iqbal Z, et al. Front Plant Sci. 2017 Dec 22;8:2208. doi: 10.3389/fpls.2017.02208. eCollection 2017. PMID: 29312431
10	RNA interference-based resistance in transgenic tomato plants against Tomato yellow leaf curl virus-Oman (TYLCV-OM) and its associated betasatellite. Ammara Ue, et al. Virol J. 2015 Mar 4;12:38. doi: 10.1186/s12985-015-0263-y. PMID: 25890080