Tomato leaf curl Pakistan betasatellite

Basic Information

Abbreviation	ToLCuPKB
Genebank Accession	LN811050
Isolate	PK-HZ3-15
Download	Genome \|GFF3 \|PEP \|CDS

Genome

ACCGGTGGCGAGTTGGATTTTTTTGCGTCGTTGTGGGTCCCACCTGATAGATCTGCAGAGATAATGGGCCTGAAATGCAATTGGTCCTGAATTGAAATGGGCTTGGACCAGTAGATTCGGGACTGGGCCAATACAATAAGATAAGAAATGGGTTCTTAAATTAAAACAAAGATTTATTCATTTCAAATGCATTACACACTCACACACACACATTCGTACATACATCGTATTCATCTCCTATACGTATATCAACTAATGGAGCTTCTTCCATCATGAGCATATCAATTCCCTCCACCATGTCTTCCTGTTTGAATTCCCATATAGTAGACTCCTTGTACATGAGGGCTAACATGTTGTGTATACCTTCCTCTAGAGCGTTGAAGTCGAACGGAGGTATGATCCCATCATGGCCGTATGGAATCATGAACTTCTTCGTTGTCAGTGCTGGAGATCCTGTTGAGAATAGCTGTATTTGAACCAGAATGGAGTTATCTTCTTTCAATCGGACGTCTATGATGAATTTCATTCCCTTCTGGTTATTGTATTTGATCGTCATTTTGTTGTGTGTGTGTTCATATTTCATGAACACACATTAAATAGAACCAAAAGTTGTGATATATGGTTATGATTGATATACGTGGTTTGGTTATGTTCATATATTTTGTAGTGGAGATATTTTTCATGGATGTTGACGTTGATATTTATTGGTCTTGTAAGACGGAGTTTTAATGAATCCTAATTATGATATAATTAGGAAGAAAGAAAAAAAAAGAAAAAAATGGAAAATCATAAAAAAGATAAAAACCTACATAAACCCTTAATTCTTTTATATGAAAATGGTCGCGCAGCGAAACAGAAAACCGAAACTAACAAAAGAAATGAAAATAAATGAAAAAAGAAATGGAGAAAACGTGAGAAAAACCGAACTCAAAACGAAGACGTTTTGAAGAGGAAAGAAAAAAAAAGAAAATAAAATGAATTTAACATCCATAACAAAAACGCTGTCGTATAAAGGTGACTGGGAGGTTTTACTATTTACTGGGCGGTAAATAGTAAATAAGTTAAAAAGAGTTAATTTTGGAGTACCAATAGGTAAATGTGTCCCCAATATATCGGTACTCAATCGGGGACAGGAGAGAGAAATAATTCCCGCTTTCCTAAAATACCCCCACTTTCGTGTCTGAGAGGCGCGTCGGAGTGCTCTGTAAAAGGTGACCTTCTCTCACCTAAAACTCGCCGGAATGCCCAAACTGGCTGATTCCGGCATCAATTTACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCACCGTTTAATATT

Gene Information

NCBI Accession	CEO91862.1
Location	200-583
Gene Name	betaC1
Protein Name	betaC1 protein
Coding Region	ATGAAATATGAACACACACACAACAAAATGACGATCAAATACAATAACCAGAAGGGAATGAAATTCATCATAGACGTCCGATTGAAAGAAGATAACTCCATTCTGGTTCAAATACAGCTATTCTCAACAGGATCTCCAGCACTGACAACGAAGAAGTTCATGATTCCATACGGCCATGATGGGATCATACCTCCGTTCGACTTCAACGCTCTAGAGGAAGGTATACACAACATGTTAGCCCTCATGTACAAGGAGTCTACTATATGGGAATTCAAACAGGAAGACATGGTGGAGGGAATTGATATGCTCATGATGGAAGAAGCTCCATTAGTTGATATACGTATAGGAGATGAATACGATGTATGTACGAATGTGTGTGTGTGA
Protein Sequence	MKYEHTHNKMTIKYNNQKGMKFIIDVRLKEDNSILVQIQLFSTGSPALTTKKFMIPYGHDGIIPPFDFNALEEGIHNMLALMYKESTIWEFKQEDMVEGIDMLMMEEAPLVDIRIGDEYDVCTNVCV

References More References in PubMed

1	Tomato leaf curl New Delhi virus: a widespread bipartite begomovirus in the territory of monopartite begomoviruses. Zaidi SS, et al. Mol Plant Pathol. 2017 Sep;18(7):901-911. doi: 10.1111/mpp.12481. Epub 2016 Oct 17. PMID: 27553982
2	Detection and characterization of a new betasatellite: variation in disease symptoms of tomato leaf curl Pakistan virus-India due to associated betasatellite. Kumar J, et al. Arch Virol. 2013 Jan;158(1):257-61. doi: 10.1007/s00705-012-1486-5. Epub 2012 Sep 29. PMID: 23053516
3	First Report of Tomato leaf curl Albatinah virus (ToLCABV) and its Associated Betasatellite Infecting Papaya in Oman. Ammara UE, et al. Plant Dis. 2015 Mar;99(3):421. doi: 10.1094/PDIS-09-14-0912-PDN. PMID: 30699712
4	Cotton leaf curl Multan betasatellite impaired ToLCNDV ability to maintain cotton leaf curl Multan alphasatellite. Iqbal Z, et al. Braz J Biol. 2022 Jul 25;84:e260922. doi: 10.1590/1519-6984.260922. eCollection 2022. PMID: 35894353
5	Sentinel plot surveillance of cotton leaf curl disease in Pakistan- a case study at the cultivated cotton-wild host plant interface. Iqbal MJ, et al. Virus Res. 2023 Aug;333:199144. doi: 10.1016/j.virusres.2023.199144. Epub 2023 Jun 7. PMID: 37271420
6	RNA interference-based resistance in transgenic tomato plants against Tomato yellow leaf curl virus-Oman (TYLCV-OM) and its associated betasatellite. Ammara Ue, et al. Virol J. 2015 Mar 4;12:38. doi: 10.1186/s12985-015-0263-y. PMID: 25890080
7	Molecular and biological characterization of Chilli leaf curl virus and associated Tomato leaf curl betasatellite infecting tobacco in Oman. Shahid MS, et al. Virol J. 2019 Nov 9;16(1):131. doi: 10.1186/s12985-019-1235-4. PMID: 31706358
8	Genetic diversity and distribution of a distinct strain of Chili leaf curl virus and associated betasatellite infecting tomato and pepper in Oman. Khan AJ, et al. Virus Res. 2013 Oct;177(1):87-97. doi: 10.1016/j.virusres.2013.07.018. Epub 2013 Jul 30. PMID: 23911631
9	A Severe Leaf Curl Disease on Chilies in Pakistan is Associated with Multiple Begomovirus Components. Akhter A, et al. Plant Dis. 2009 Sep;93(9):962. doi: 10.1094/PDIS-93-9-0962B. PMID: 30754557
10	Frequent Occurrence of Tomato Leaf Curl New Delhi Virus in Cotton Leaf Curl Disease Affected Cotton in Pakistan. Zaidi SS, et al. PLoS One. 2016 May 23;11(5):e0155520. doi: 10.1371/journal.pone.0155520. eCollection 2016. PMID: 27213535