Tomato leaf curl Pakistan betasatellite


Basic Information

Abbreviation ToLCuPKB
Genebank Accession LN811050
Isolate PK-HZ3-15
Download Genome |GFF3 |PEP |CDS

Genome

ACCGGTGGCGAGTTGGATTTTTTTGCGTCGTTGTGGGTCCCACCTGATAGATCTGCAGAGATAATGGGCCTGAAATGCAATTGGTCCTGAATTGAAATGGGCTTGGACCAGTAGATTCGGGACTGGGCCAATACAATAAGATAAGAAATGGGTTCTTAAATTAAAACAAAGATTTATTCATTTCAAATGCATTACACACTCACACACACACATTCGTACATACATCGTATTCATCTCCTATACGTATATCAACTAATGGAGCTTCTTCCATCATGAGCATATCAATTCCCTCCACCATGTCTTCCTGTTTGAATTCCCATATAGTAGACTCCTTGTACATGAGGGCTAACATGTTGTGTATACCTTCCTCTAGAGCGTTGAAGTCGAACGGAGGTATGATCCCATCATGGCCGTATGGAATCATGAACTTCTTCGTTGTCAGTGCTGGAGATCCTGTTGAGAATAGCTGTATTTGAACCAGAATGGAGTTATCTTCTTTCAATCGGACGTCTATGATGAATTTCATTCCCTTCTGGTTATTGTATTTGATCGTCATTTTGTTGTGTGTGTGTTCATATTTCATGAACACACATTAAATAGAACCAAAAGTTGTGATATATGGTTATGATTGATATACGTGGTTTGGTTATGTTCATATATTTTGTAGTGGAGATATTTTTCATGGATGTTGACGTTGATATTTATTGGTCTTGTAAGACGGAGTTTTAATGAATCCTAATTATGATATAATTAGGAAGAAAGAAAAAAAAAGAAAAAAATGGAAAATCATAAAAAAGATAAAAACCTACATAAACCCTTAATTCTTTTATATGAAAATGGTCGCGCAGCGAAACAGAAAACCGAAACTAACAAAAGAAATGAAAATAAATGAAAAAAGAAATGGAGAAAACGTGAGAAAAACCGAACTCAAAACGAAGACGTTTTGAAGAGGAAAGAAAAAAAAAGAAAATAAAATGAATTTAACATCCATAACAAAAACGCTGTCGTATAAAGGTGACTGGGAGGTTTTACTATTTACTGGGCGGTAAATAGTAAATAAGTTAAAAAGAGTTAATTTTGGAGTACCAATAGGTAAATGTGTCCCCAATATATCGGTACTCAATCGGGGACAGGAGAGAGAAATAATTCCCGCTTTCCTAAAATACCCCCACTTTCGTGTCTGAGAGGCGCGTCGGAGTGCTCTGTAAAAGGTGACCTTCTCTCACCTAAAACTCGCCGGAATGCCCAAACTGGCTGATTCCGGCATCAATTTACGACACGCGCGGCGGTGTGTACCCCTGGGAGGGTAGGTACCACTACGCTACGCAGCAGCCTTAGCTACGCCGGAGCTTAGCTCGCCACCGTTTAATATT

Gene Information

NCBI Accession CEO91862.1
Location 200-583
Gene Name betaC1
Protein Name betaC1 protein
Coding Region ATGAAATATGAACACACACACAACAAAATGACGATCAAATACAATAACCAGAAGGGAATGAAATTCATCATAGACGTCCGATTGAAAGAAGATAACTCCATTCTGGTTCAAATACAGCTATTCTCAACAGGATCTCCAGCACTGACAACGAAGAAGTTCATGATTCCATACGGCCATGATGGGATCATACCTCCGTTCGACTTCAACGCTCTAGAGGAAGGTATACACAACATGTTAGCCCTCATGTACAAGGAGTCTACTATATGGGAATTCAAACAGGAAGACATGGTGGAGGGAATTGATATGCTCATGATGGAAGAAGCTCCATTAGTTGATATACGTATAGGAGATGAATACGATGTATGTACGAATGTGTGTGTGTGA
Protein Sequence MKYEHTHNKMTIKYNNQKGMKFIIDVRLKEDNSILVQIQLFSTGSPALTTKKFMIPYGHDGIIPPFDFNALEEGIHNMLALMYKESTIWEFKQEDMVEGIDMLMMEEAPLVDIRIGDEYDVCTNVCV

References More References in PubMed

1

Tomato leaf curl New Delhi virus: a widespread bipartite begomovirus in the territory of monopartite begomoviruses.

Zaidi SS, et al.  Mol Plant Pathol. 2017 Sep;18(7):901-911. doi: 10.1111/mpp.12481. Epub 2016 Oct 17.

PMID: 27553982

2

Detection and characterization of a new betasatellite: variation in disease symptoms of tomato leaf curl Pakistan virus-India due to associated betasatellite.

Kumar J, et al.  Arch Virol. 2013 Jan;158(1):257-61. doi: 10.1007/s00705-012-1486-5. Epub 2012 Sep 29.

PMID: 23053516

3

First Report of Tomato leaf curl Albatinah virus (ToLCABV) and its Associated Betasatellite Infecting Papaya in Oman.

Ammara UE, et al.  Plant Dis. 2015 Mar;99(3):421. doi: 10.1094/PDIS-09-14-0912-PDN.

PMID: 30699712

4

Cotton leaf curl Multan betasatellite impaired ToLCNDV ability to maintain cotton leaf curl Multan alphasatellite.

Iqbal Z, et al.  Braz J Biol. 2022 Jul 25;84:e260922. doi: 10.1590/1519-6984.260922. eCollection 2022.

PMID: 35894353

5

Sentinel plot surveillance of cotton leaf curl disease in Pakistan- a case study at the cultivated cotton-wild host plant interface.

Iqbal MJ, et al.  Virus Res. 2023 Aug;333:199144. doi: 10.1016/j.virusres.2023.199144. Epub 2023 Jun 7.

PMID: 37271420

6

Molecular and biological characterization of Chilli leaf curl virus and associated Tomato leaf curl betasatellite infecting tobacco in Oman.

Shahid MS, et al.  Virol J. 2019 Nov 9;16(1):131. doi: 10.1186/s12985-019-1235-4.

PMID: 31706358

7

A Severe Leaf Curl Disease on Chilies in Pakistan is Associated with Multiple Begomovirus Components.

Akhter A, et al.  Plant Dis. 2009 Sep;93(9):962. doi: 10.1094/PDIS-93-9-0962B.

PMID: 30754557

8

RNA interference-based resistance in transgenic tomato plants against Tomato yellow leaf curl virus-Oman (TYLCV-OM) and its associated betasatellite.

Ammara Ue, et al.  Virol J. 2015 Mar 4;12:38. doi: 10.1186/s12985-015-0263-y.

PMID: 25890080

9

Frequent Occurrence of Tomato Leaf Curl New Delhi Virus in Cotton Leaf Curl Disease Affected Cotton in Pakistan.

Zaidi SS, et al.  PLoS One. 2016 May 23;11(5):e0155520. doi: 10.1371/journal.pone.0155520. eCollection 2016.

PMID: 27213535

10

Maintenance of Cotton Leaf Curl Multan Betasatellite by Tomato Leaf Curl New Delhi Virus-Analysis by Mutation.

Iqbal Z, et al.  Front Plant Sci. 2017 Dec 22;8:2208. doi: 10.3389/fpls.2017.02208. eCollection 2017.

PMID: 29312431