Dicliptera yellow mottle virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_000840105.1 |
| Isolate |
USA:Florida |
| Release date |
2015/2/12 |
| Submitter |
Lotrakul,P., Valverde,R.A., Landry,A.D. |
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
TAATATTACCGGATGGCCGCGCCCCCCCCTCCCCTTTGCCGTACACTCTTGTGGTCCCCCCTCACTTTAATTTGAATTAAATGTCTGTGGACCAATCATATTGCATGTGCAGAGTCTAGATATTTGTGTTACTACTTGCTGATTAAGTTTAGTGGGCCTATAAAATTCAAATTAAAGCCCATTCATTTTAATTCAAAATGTCTAAGAGGGATGCCCCATGGCGTATGATGGTGGGCCCCTCTAAGGTTAGGCGTACTCTCAATTTCTCCCCTGGTGGAGGAATGGGCTCAAAGTCCAATAGGGCCTCTAGTTGGGTTAACAGGCCCATGTATAGGAAGCCCAGAATATATCGTATGTACAGGACTCCTGATGTGCCCAAAGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTATGAGCAGCGTCATGATATTTCACATGTTGGTAAGGTGATGTGTGTTTCTGATGTGACACGTGGTAATGGCATTACCCACCGTGTGGGGAAACGTTTTTGTGTCAAGTCTGTGTACATTCTAGGGAAGATATGGATGGATGAGAACATCAAGCTCAAGAACCACACTAATAGTGTCATGTTTTGGTTGGTTCGAGACAGGAGACCATATGGCACTCCTATGGATTTTGGCCAAGTATTCAACATGTTTGATAATGAGCCCAGTACTGCTACTGTGAAGAACGATCTACGTGATCGTTATCAAGTCATGCATAAGTTTTATGCTAAGGTGACTGGTGGACAGTATGCAAGTAATGAACAGGCTTTGGTGAAGCGTTTTTGGAAGATCAACAACCATGTAGTGTACAACCATCAAGAAGCTGGGAAATATGAGAATCACACAGAGAATGCTCTGTTATTGTATATGGCATGTACTCATGCTTCTAATCCTGTGTATGCTACTTTGAAAATTCGGATCTATTTTTATGATTCGATTATGAATTAATAAAATTTGAATTTTATTTCATGATTTTCTAATACATCTGTTACATAAGACTTGTCTGTTGCATAATGAACAGCTCCAAGTACATTGTTAATTGATACAACACCTATGTTATTTAAATATGACATTACAAGGAATTTGAATCTACTTAAATATATCATCCCAGAAGCTGTCAGAGAAGTCGTCCAGACTTGGAAGTTGAAGTAGGCTTTGTGAAGATTCAATTTCTTCCGAAGGTTGTAATTGAACCTTATCTGAAGGTGATACACCCTGCTGCGTGTGTACATTGGATCCTCTACTTGGAGTATCTTGAAATAGAGGGGATTTGGAACTTCCCAAATAAAAACGCCACTCGTTGCTTGAACTGCAGTGATGGGTTCCTCTGTGCGTGAATCCATGATTAGCACAGTTAATGTGGATGTATATTGAACAGCCACAGTTGAGGTCAACTCGTCGTCGCCTGATTGCTCTCTTCTTAGCTCTCTTGTGAATTGGTTTGATAGAGGGCGCCTGTGAGGGTGATGAAGATGGCATTATGTATTGTCCAGTTTTGTAATGCCTGATTTTCTTGTTTATTAAGGAAATCTTTATAGCTGGAGCCCTCACCAGGATTGCATAGCACGATTGATGGAATGCCCCCTTTAATTTGAACTGGCTTTCCATACTTACAGTTTGACTGCCAGTCTTTCTGGGCCCCAATTAATTCTTTCCAATGCTTTAATTTCAAATAGCTAGGGCTGACATCATCAATGACGTTATATTCTACGTCATTCGAATAGACCCTAGAATTGAAATCCAGATGACCTGACAGATAATTATGCTTTCCTAATGATCTTGCCCACATTGTCTTGCCGGTTCTTGAATCACCTTCGACGATGATACTAATAGGTCTCTCTGGCCGCGCAGCGGCACTCATGCCAAAATAATTGTCTGCCCATTCCTGCATCTCTTCTGGTACGTTAGTGAAAGAAGACAGTTGAAACGGAGGGACCCACGGTTCTGGAGCCTTCATGAATATGCGTTCCAAATTTGCCCTTAGATTATGTTGTTGTGTAACATAATCTTTTAGCTGTTCTTCTTTCAAAATTTGAAGAGCTTGTTCTGCAGATGAGGCATTTAATGCCCTGGCGTAAGAGTCATTAGCTGTCTGGCAGCCTCCTCTAGCACTTCTACCGTCAACCTGGTATTGTCCCCACTCCAGTGTGTCTCCATCCTTGCTGACGTAGGACTTGACGTCGGAGCTGGATTTAGCTCCCTGAATGTTTGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGATCGAAGAATCTGTTACTTGTGCAGTTGTATTTCCCTTCGAATTGTATAAGCACATGGAGATGAGGCTGCCCATCTTCGTGTAATTCTCTGGCAATTTTAATGAATTTCTTATTTGTGGGTGTCTTCAAGTTGATGAGTTGCTGTAATGCTTCTTCTTTTGATAGTGAGCACTGAGGATATGTGAGAAAATAATTTTTGGCTTTAATGGAGAAGACACCCTTCCTTGGCATTGTTCCCCCAGAAGTGTTCCCCCAATTTCCTCTGGCTCCAAAACTCTATACAATTGGGAGAACTGGGGGAAAATATATACTAGAAGTCTAAGTAAGGAGATTGCAACACGTGGCGGCCATCCAATA
Gene Information
|
NCBI Accession
|
NP_620849.1
|
|
Location
|
198-953 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein AV1 |
|
Coding Region
|
ATGTCTAAGAGGGATGCCCCATGGCGTATGATGGTGGGCCCCTCTAAGGTTAGGCGTACTCTCAATTTCTCCCCTGGTGGAGGAATGGGCTCAAAGTCCAATAGGGCCTCTAGTTGGGTTAACAGGCCCATGTATAGGAAGCCCAGAATATATCGTATGTACAGGACTCCTGATGTGCCCAAAGGCTGTGAAGGCCCATGTAAGGTCCAGTCCTATGAGCAGCGTCATGATATTTCACATGTTGGTAAGGTGATGTGTGTTTCTGATGTGACACGTGGTAATGGCATTACCCACCGTGTGGGGAAACGTTTTTGTGTCAAGTCTGTGTACATTCTAGGGAAGATATGGATGGATGAGAACATCAAGCTCAAGAACCACACTAATAGTGTCATGTTTTGGTTGGTTCGAGACAGGAGACCATATGGCACTCCTATGGATTTTGGCCAAGTATTCAACATGTTTGATAATGAGCCCAGTACTGCTACTGTGAAGAACGATCTACGTGATCGTTATCAAGTCATGCATAAGTTTTATGCTAAGGTGACTGGTGGACAGTATGCAAGTAATGAACAGGCTTTGGTGAAGCGTTTTTGGAAGATCAACAACCATGTAGTGTACAACCATCAAGAAGCTGGGAAATATGAGAATCACACAGAGAATGCTCTGTTATTGTATATGGCATGTACTCATGCTTCTAATCCTGTGTATGCTACTTTGAAAATTCGGATCTATTTTTATGATTCGATTATGAATTAA |
|
Protein Sequence
|
MSKRDAPWRMMVGPSKVRRTLNFSPGGGMGSKSNRASSWVNRPMYRKPRIYRMYRTPDVPKGCEGPCKVQSYEQRHDISHVGKVMCVSDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYAKVTGGQYASNEQALVKRFWKINNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
|
NCBI Accession
|
NP_620850.1
|
|
Location
|
950-1348 |
|
Gene Name
|
AC3 |
|
Protein Name
|
AC3 |
|
Coding Region
|
ATGGATTCACGCACAGAGGAACCCATCACTGCAGTTCAAGCAACGAGTGGCGTTTTTATTTGGGAAGTTCCAAATCCCCTCTATTTCAAGATACTCCAAGTAGAGGATCCAATGTACACACGCAGCAGGGTGTATCACCTTCAGATAAGGTTCAATTACAACCTTCGGAAGAAATTGAATCTTCACAAAGCCTACTTCAACTTCCAAGTCTGGACGACTTCTCTGACAGCTTCTGGGATGATATATTTAAGTAGATTCAAATTCCTTGTAATGTCATATTTAAATAACATAGGTGTTGTATCAATTAACAATGTACTTGGAGCTGTTCATTATGCAACAGACAAGTCTTATGTAACAGATGTATTAGAAAATCATGAAATAAAATTCAAATTTTATTAA |
|
Protein Sequence
|
MDSRTEEPITAVQATSGVFIWEVPNPLYFKILQVEDPMYTRSRVYHLQIRFNYNLRKKLNLHKAYFNFQVWTTSLTASGMIYLSRFKFLVMSYLNNIGVVSINNVLGAVHYATDKSYVTDVLENHEIKFKFY |
|
NCBI Accession
|
NP_620851.1
|
|
Location
|
1095-1613 |
|
Gene Name
|
AC2 |
|
Protein Name
|
AC2 |
|
Coding Region
|
ATGGAAAGCCAGTTCAAATTAAAGGGGGCATTCCATCAATCGTGCTATGCAATCCTGGTGAGGGCTCCAGCTATAAAGATTTCCTTAATAAACAAGAAAATCAGGCATTACAAAACTGGACAATACATAATGCCATCTTCATCACCCTCACAGGCGCCCTCTATCAAACCAATTCACAAGAGAGCTAAGAAGAGAGCAATCAGGCGACGACGAGTTGACCTCAACTGTGGCTGTTCAATATACATCCACATTAACTGTGCTAATCATGGATTCACGCACAGAGGAACCCATCACTGCAGTTCAAGCAACGAGTGGCGTTTTTATTTGGGAAGTTCCAAATCCCCTCTATTTCAAGATACTCCAAGTAGAGGATCCAATGTACACACGCAGCAGGGTGTATCACCTTCAGATAAGGTTCAATTACAACCTTCGGAAGAAATTGAATCTTCACAAAGCCTACTTCAACTTCCAAGTCTGGACGACTTCTCTGACAGCTTCTGGGATGATATATTTAAGTAG |
|
Protein Sequence
|
MESQFKLKGAFHQSCYAILVRAPAIKISLINKKIRHYKTGQYIMPSSSPSQAPSIKPIHKRAKKRAIRRRRVDLNCGCSIYIHINCANHGFTHRGTHHCSSSNEWRFYLGSSKSPLFQDTPSRGSNVHTQQGVSPSDKVQLQPSEEIESSQSLLQLPSLDDFSDSFWDDIFK |
|
NCBI Accession
|
NP_620852.1
|
|
Location
|
1426-2481 |
|
Gene Name
|
AC1 |
|
Protein Name
|
replication initiation protein AC1 |
|
Coding Region
|
ATGCCAAGGAAGGGTGTCTTCTCCATTAAAGCCAAAAATTATTTTCTCACATATCCTCAGTGCTCACTATCAAAAGAAGAAGCATTACAGCAACTCATCAACTTGAAGACACCCACAAATAAGAAATTCATTAAAATTGCCAGAGAATTACACGAAGATGGGCAGCCTCATCTCCATGTGCTTATACAATTCGAAGGGAAATACAACTGCACAAGTAACAGATTCTTCGATCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACGTCAGCAAGGATGGAGACACACTGGAGTGGGGACAATACCAGGTTGACGGTAGAAGTGCTAGAGGAGGCTGCCAGACAGCTAATGACTCTTACGCCAGGGCATTAAATGCCTCATCTGCAGAACAAGCTCTTCAAATTTTGAAAGAAGAACAGCTAAAAGATTATGTTACACAACAACATAATCTAAGGGCAAATTTGGAACGCATATTCATGAAGGCTCCAGAACCGTGGGTCCCTCCGTTTCAACTGTCTTCTTTCACTAACGTACCAGAAGAGATGCAGGAATGGGCAGACAATTATTTTGGCATGAGTGCCGCTGCGCGGCCAGAGAGACCTATTAGTATCATCGTCGAAGGTGATTCAAGAACCGGCAAGACAATGTGGGCAAGATCATTAGGAAAGCATAATTATCTGTCAGGTCATCTGGATTTCAATTCTAGGGTCTATTCGAATGACGTAGAATATAACGTCATTGATGATGTCAGCCCTAGCTATTTGAAATTAAAGCATTGGAAAGAATTAATTGGGGCCCAGAAAGACTGGCAGTCAAACTGTAAGTATGGAAAGCCAGTTCAAATTAAAGGGGGCATTCCATCAATCGTGCTATGCAATCCTGGTGAGGGCTCCAGCTATAAAGATTTCCTTAATAAACAAGAAAATCAGGCATTACAAAACTGGACAATACATAATGCCATCTTCATCACCCTCACAGGCGCCCTCTATCAAACCAATTCACAAGAGAGCTAA |
|
Protein Sequence
|
MPRKGVFSIKAKNYFLTYPQCSLSKEEALQQLINLKTPTNKKFIKIARELHEDGQPHLHVLIQFEGKYNCTSNRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYVSKDGDTLEWGQYQVDGRSARGGCQTANDSYARALNASSAEQALQILKEEQLKDYVTQQHNLRANLERIFMKAPEPWVPPFQLSSFTNVPEEMQEWADNYFGMSAAARPERPISIIVEGDSRTGKTMWARSLGKHNYLSGHLDFNSRVYSNDVEYNVIDDVSPSYLKLKHWKELIGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKDFLNKQENQALQNWTIHNAIFITLTGALYQTNSQES |