| Genus | Begomovirus | 
|---|---|
| NCBI Assembly | GCF_003029545.2 | 
| Isolate | Uganda | 
| Release date | 2018/12/27 | 
| Submitter | Mollel,H.G., Sseruwagi,P., Ndunguru,J., Alicai,T., Colvin,J., Navas-Castillo,J., Fiallo-Olive,E. | 
| Host | |
| Vector | |
| Download | Genome |GFF3 |PEP |CDS | 
            | NCBI Accession | YP_009547944.1 | 
|---|---|
| Location | 299-1078 | 
| Gene Name | BV1 | 
| Protein Name | NSP | 
| Coding Region | ATGTGGTCTCCTAGATTTAAGGGAAGACGGAGGTTTGACCGGTCTAAGGTTTCCGGTTACCGGATACCAACTACAACGCCTTCTAGGCGTTACAAGAGTCAAGGTTTTTCTCGTGGTGGTGTTTCTCGTTCTCTGACGTATGAACGTGTTGAGCGCCCGTTGGGCTACAAGTGTTTAATGGAACGACATCATGGTGATGCGTTCGCCTTGACCAGTAATTGTGATACTACGTCATTCATTAGTTACCCTGTACGTGCCCTCTCTGGAGAAGGACGTTCTCGTGACTACATTAAATTGCTAAGCATACGTGCATCAGGCGTCATTAATGTTAAAGGCCTGGTTAAACATGACGCCATGGAGAGGTCGACAAACTTCTCTGGCGTTTTTGTGATGGCGTTGGTGATGGACATGAAGCCATATTTGCCGGAAGGAAGCAACCAACTCCCCTCGTTTGTGGAGTTGTTTGGACCCTATTCATCTGCATATGTGACTCTTCGTTTGTTGGACAATCAAACCAGTAGGTTTAGGATACTAACGAGCGTGAGCAAAATGGTGTACACGCAGGACGATAGTAGAGTCCTCCAGTTTAAGTGTTATAGGCGTTTTACGCACTCGAGGTATCCCATATGGGCCTCATTTTACGACCATGACATCGGTAATAGTGGGGGAAATTATAGGAATATTTCTAGGAATGCGGTGTTAGTCAGCTATGCATTTGTATCGGAACAGTCGATGTCATGTGTACCATTTGTTCAATTGGAAACGCGTTATATTGGATAA | 
| Protein Sequence | MWSPRFKGRRRFDRSKVSGYRIPTTTPSRRYKSQGFSRGGVSRSLTYERVERPLGYKCLMERHHGDAFALTSNCDTTSFISYPVRALSGEGRSRDYIKLLSIRASGVINVKGLVKHDAMERSTNFSGVFVMALVMDMKPYLPEGSNQLPSFVELFGPYSSAYVTLRLLDNQTSRFRILTSVSKMVYTQDDSRVLQFKCYRRFTHSRYPIWASFYDHDIGNSGGNYRNISRNAVLVSYAFVSEQSMSCVPFVQLETRYIG | 
| NCBI Accession | YP_009547945.1 | 
|---|---|
| Location | 1093-1998 | 
| Gene Name | BC1 | 
| Protein Name | MP | 
| Coding Region | ATGGACACTTCAATTCCAGTGATGCATAGCGAATACATTCAAAGCACAAGGTCTGAATACAGACTTACAAATAACGAAACCCCAATTTCGTTACAATTCCCGTCATCACTGGAAAAGGTACGAGTCCGAATAATGGGAAAATGCATGAAGGTCGACCACGTAATCATCGAATACCGTAACCAGGTTCCGTTTAATGCCCAAGGCTCGGTGATTGTCACAATCCGTGACACAAGGCTTAGCGAAGAACAACAAGACCAAGCCCAGTTCACATTTCCTATAGGCTGTAATGTCGACCTACATTACTTCTCCGCCTCCTTCTTCTCCCTAGAAGATAAAGCACCGTGGGAGTTATTTTACAAAGTAGAGGACTCAAATGTGAAGGACGGAGTAACGTTTGCGCAAATCAAGGCCAAGCTTAAGTTATCATCCGCAACGCACTCAACGGACATAAGGTTTAAGCAACCCACAATAAAAATCCTCTCAAAGGATTACAACGCGGACTGTGTGGACTTCTGGTCCGTTGGAAAGCCCAAACCGATTAGGCGACTCATTAACCCAGGCCCAACAACAGAGTCCAGTCTTGCAGGGCATTACCGGGCCGTTCAAATACAACCCGGTGAAACATGGGCCACCAAATCGACTATAGGCAGGTCTTCGTCCATGCGACTAACAACGTCGCAACCAATGCATACGGGTTCCACCTTACGCACACAGAGTGCTTGTTCCGACGCGGAGTTCCCCTTACAAGGACTGCACAAGCTACCTGAAGCATCACTAGACCCAGGAGATTCAATTTCCCAAACAACGTCAAATGCGCTCAGCAAGGCGGACATTGAGTCCATTGTAGAACAAACTGTAAATAAGTGCTTAATCGCACAAAGAGGCAGTAGCCTTAAAAACTTGTAA | 
| Protein Sequence | MDTSIPVMHSEYIQSTRSEYRLTNNETPISLQFPSSLEKVRVRIMGKCMKVDHVIIEYRNQVPFNAQGSVIVTIRDTRLSEEQQDQAQFTFPIGCNVDLHYFSASFFSLEDKAPWELFYKVEDSNVKDGVTFAQIKAKLKLSSATHSTDIRFKQPTIKILSKDYNADCVDFWSVGKPKPIRRLINPGPTTESSLAGHYRAVQIQPGETWATKSTIGRSSSMRLTTSQPMHTGSTLRTQSACSDAEFPLQGLHKLPEASLDPGDSISQTTSNALSKADIESIVEQTVNKCLIAQRGSSLKNL | 
| NCBI Accession | YP_009508449.1 | 
|---|---|
| Location | 137-487 | 
| Gene Name | AV2 | 
| Protein Name | pre-coat protein | 
| Coding Region | ATGTGGGACCCTCTTGAACATCCATTCCCCCATACCGTTTACGGTGTCAGGTGTATGCTTGCGGTGAAATACGTGCAACTTGTGATTGCCACGTATCCCGTCGATAGTATTGGGGAGGATCTTTTACGCCGTCTAATTCAGATTCTACGGTGCAGGAACCATGACGAAGCGGAGTTACGATACAGCCTTCTCTACGCCGATGTCGAGCGCACGGAGGCGTCTGACCTTCGCAACCCCTCTGGCGCTCCCTGCACCTGCCGGAGCTGCCCCAAACACGTACAAACGAAGGGCCTGGAGGAACCGGCCCATGTACAGGAAGCCCAAGATATACAGGGTTTACCGTTCAAGTGA | 
| Protein Sequence | MWDPLEHPFPHTVYGVRCMLAVKYVQLVIATYPVDSIGEDLLRRLIQILRCRNHDEAELRYSLLYADVERTEASDLRNPSGAPCTCRSCPKHVQTKGLEEPAHVQEAQDIQGLPFK | 
| NCBI Accession | YP_009508450.1 | 
|---|---|
| Location | 297-1070 | 
| Gene Name | AV1 | 
| Protein Name | coat protein | 
| Coding Region | ATGACGAAGCGGAGTTACGATACAGCCTTCTCTACGCCGATGTCGAGCGCACGGAGGCGTCTGACCTTCGCAACCCCTCTGGCGCTCCCTGCACCTGCCGGAGCTGCCCCAAACACGTACAAACGAAGGGCCTGGAGGAACCGGCCCATGTACAGGAAGCCCAAGATATACAGGGTTTACCGTTCAAGTGATGTACCCAAGGGCTGTGAAGGCCCCTGTAAGGTCCAGTCTTATGACCAGAGGTTTGATTGTAAACACACTGGTAGTGTTCTCTGTGTGTCAGATATTACCCGTGGTAGTGGCTTGACTCATCGCGTAGGCAAACGCTTTTGCGTGAAGTCCATCATGTTTAGGGGTAAAGTCTGGATGGACGATAACATCAAATCTAAGAGTCATACGAACCATGTGATGTTTTTTTTGGTTCGTGACCGACGCCCGTATGGAACTCCACCTGACTTTGGTCAAGTGTTTAACATGTTTGACAATGAGCCTACCACTGCTACTGTGAAACAAGATTTCCGTGATCGTTTTCAAGTAAAGAGGCGTTGGTGGGTTGGTGTAACCGGTGGACAGTATGCGTCGAAGGAACAGGCGATAGTCAACAAGTTCGTTTATTTAAACAATTATGTTGTTTACAATCACCAAGAAGCTGGGAAGTACGAGAATCACACTGAGAACGCTATGTTATTGTATATGGCATGTACTCATGCATCAAACCCTGTGTATGCAACTCTAAAAATACGGGTGTATTTTTATGACTCAATTGGCAATTAA | 
| Protein Sequence | MTKRSYDTAFSTPMSSARRRLTFATPLALPAPAGAAPNTYKRRAWRNRPMYRKPKIYRVYRSSDVPKGCEGPCKVQSYDQRFDCKHTGSVLCVSDITRGSGLTHRVGKRFCVKSIMFRGKVWMDDNIKSKSHTNHVMFFLVRDRRPYGTPPDFGQVFNMFDNEPTTATVKQDFRDRFQVKRRWWVGVTGGQYASKEQAIVNKFVYLNNYVVYNHQEAGKYENHTENAMLLYMACTHASNPVYATLKIRVYFYDSIGN | 
| NCBI Accession | YP_009508451.1 | 
|---|---|
| Location | 1067-1471 | 
| Gene Name | AC3 | 
| Protein Name | REn | 
| Coding Region | ATGGATTCACGCACAAAGGAGTTACTCACTCCATCGGAAGCAGAGCGTGGCGAGTATATCTGGGAGCTGAACAATCCCCTGTCTTTCAAACTCCTCCGAGAAGACTATGGGGTGATGAACCAACCTTACGACCACCTGAAGGTTCGCATAATGTTCAACCACTGCCTCAAGAAGAGGTTGGAGATTCACAAGTGCTTCCTCACCTGGACGATATCACTCCACTCACAAGCGATGAACTCGCGTTTCTTTGGGGCGTTTAAATATTTAGTTAAGGTGTATTTAAAACGCTTAGGTGTTATTTCCATTAATAATGTAATTCGAGCTGTGAATCATGTATTGTTCGACCAACTCACAAATGTAATCGAATGCGATTTGCAACATGAAATAAAATTCAACATTTATTAA | 
| Protein Sequence | MDSRTKELLTPSEAERGEYIWELNNPLSFKLLREDYGVMNQPYDHLKVRIMFNHCLKKRLEIHKCFLTWTISLHSQAMNSRFFGAFKYLVKVYLKRLGVISINNVIRAVNHVLFDQLTNVIECDLQHEIKFNIY | 
| NCBI Accession | YP_009508452.1 | 
|---|---|
| Location | 1212-1622 | 
| Gene Name | AC2 | 
| Protein Name | TrAP | 
| Coding Region | ATGCGATATTCTACACCATCAAAGAGCCACTGTTCTCCTCCGAGCATCAAGGCTCAACACAGCAAGGCGAAACGGCAGAGGGCGACTAGGAGACGCCGAATAGATTGTCCGTGCGGGTGCTCGATATACGTACACATCAACTGTAGCCACAATGGATTCACGCACAAAGGAGTTACTCACTCCATCGGAAGCAGAGCGTGGCGAGTATATCTGGGAGCTGAACAATCCCCTGTCTTTCAAACTCCTCCGAGAAGACTATGGGGTGATGAACCAACCTTACGACCACCTGAAGGTTCGCATAATGTTCAACCACTGCCTCAAGAAGAGGTTGGAGATTCACAAGTGCTTCCTCACCTGGACGATATCACTCCACTCACAAGCGATGAACTCGCGTTTCTTTGGGGCGTTTAA | 
| Protein Sequence | MRYSTPSKSHCSPPSIKAQHSKAKRQRATRRRRIDCPCGCSIYVHINCSHNGFTHKGVTHSIGSRAWRVYLGAEQSPVFQTPPRRLWGDEPTLRPPEGSHNVQPLPQEEVGDSQVLPHLDDITPLTSDELAFLWGV | 
| NCBI Accession | YP_009508453.1 | 
|---|---|
| Location | 1534-2610 | 
| Gene Name | AC1 | 
| Protein Name | Rep | 
| Coding Region | ATGCCACGGAGAGGGTCTTTTTGTGTGAAGGCAAAAAATATTTTCCTCACATATCCCAGGTGCGCTCTCACAAAGGAGGAAACACTTTCCCAATTACAAAACATACACTGTTCTTCTAACAAGAAATTTATCAAGATAGCTCGTGAACTACACGAGGATGGGGAACCACATCTCCATGTGCTTATCCAGTTTGAGGGAAAGTGTCAAATCACTAACCAGAAACACTTCGACCTCGTATCCCCAGTGCGATCAACACATTACCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGACGTCAAAAAATACATTGATAAAGATGGAGATACCCTAGACTGGGGAACGTTTCAGATCGACGGTCGAAGTGCTAGAGGAGGTTGCCAAAATGCAAACGACACGTGCGCAAATGCATTAAATGCAGGTTCAGCGGAAGCTGCATTAGCCATCATTAAGGAGCAGCTTCCCAAGGATTATATTTTCCAATATCACAATCTCATGGGCAACCTCGAACGCATATTCACACCTAAAACGGCGATATACAAATCGCCCTTTACTGTTGAACAATTTAACAATGTGCCAGAAGTATTAACTCGCTGGGCTGCTGAAAATGTGAAGGATTCCGCTGCGCGGCCGATGAGACCTATAAGCATCGTTCTTGAGGGTGAGTCTAGAACAGGGAAGACCATGTGGGCCAGGGCGTTGGGTAGGCACAATTACCTATGTGGCCATTTGGATCTTAGCGCCAAGGTCTATTCAAACGATGCGTGGTACAACGTAATCGATGACGTAGATCCGCACTATCTAAAGCACCTAAAGGAATTCATGGGGGCCCAGAAGGACTGGCAAAGCAACGTGAAATACGGAAAGCCCACTCAAATTAAAGGAGGCATTCCCACGATATTTCTGTGCAACGCGGGGCCCAAATCTTCCTATAAAGAATATTTGGAAGAGGAGCATAATGCACCGCTAAAGGAGTGGGCAAGCAAGAATGCGATATTCTACACCATCAAAGAGCCACTGTTCTCCTCCGAGCATCAAGGCTCAACACAGCAAGGCGAAACGGCAGAGGGCGACTAG | 
| Protein Sequence | MPRRGSFCVKAKNIFLTYPRCALTKEETLSQLQNIHCSSNKKFIKIARELHEDGEPHLHVLIQFEGKCQITNQKHFDLVSPVRSTHYHPNIQGAKSSSDVKKYIDKDGDTLDWGTFQIDGRSARGGCQNANDTCANALNAGSAEAALAIIKEQLPKDYIFQYHNLMGNLERIFTPKTAIYKSPFTVEQFNNVPEVLTRWAAENVKDSAARPMRPISIVLEGESRTGKTMWARALGRHNYLCGHLDLSAKVYSNDAWYNVIDDVDPHYLKHLKEFMGAQKDWQSNVKYGKPTQIKGGIPTIFLCNAGPKSSYKEYLEEEHNAPLKEWASKNAIFYTIKEPLFSSEHQGSTQQGETAEGD | 
| NCBI Accession | YP_009508454.1 | 
|---|---|
| Location | 2277-2453 | 
| Gene Name | AC4 | 
| Protein Name | AC4 protein | 
| Coding Region | ATGGGGAACCACATCTCCATGTGCTTATCCAGTTTGAGGGAAAGTGTCAAATCACTAACCAGAAACACTTCGACCTCGTATCCCCAGTGCGATCAACACATTACCATCCGAACATTCAGGGAGCTAAATCAAGCTCCGACGTCAAAAAATACATTGATAAAGATGGAGATACCCTAG | 
| Protein Sequence | MGNHISMCLSSLRESVKSLTRNTSTSYPQCDQHITIRTFRELNQAPTSKNTLIKMEIP | 
| 1 | 
                             Desmodium mottle virus, the first legumovirus (genus Begomovirus) from East Africa. Mollel HG, et al. Arch Virol. 2017 Jun;162(6):1799-1803. doi: 10.1007/s00705-017-3289-1. Epub 2017 Feb 27. PMID: 28243802  | 
                    
|---|---|
| 2 | 
                             Refined structure of desmodium yellow mottle tymovirus at 2.7 A resolution. Larson SB, et al. J Mol Biol. 2000 Aug 18;301(3):625-42. doi: 10.1006/jmbi.2000.3983. PMID: 10966774  | 
                    
| 3 | 
                             Potential Primary Inoculum Sources of Bean pod mottle virus in Iowa. Krell RK, et al. Plant Dis. 2003 Dec;87(12):1416-1422. doi: 10.1094/PDIS.2003.87.12.1416. PMID: 30812381  | 
                    
| 4 | 
                            
                             Hernández-Zepeda C, et al. Virus Genes. 2007 Dec;35(3):825-33. doi: 10.1007/s11262-007-0149-1. Epub 2007 Aug 8. PMID: 17682933  | 
                    
| 5 | 
                             A comparison of certain properties of desmodium yellow mottle and turnip yellow mosaic viruses. Scott HA, et al. Virology. 1972 Nov;50(2):613-4. doi: 10.1016/0042-6822(72)90414-x. PMID: 4629044  | 
                    
| 6 | 
                            
                             Bradshaw JD, et al. J Econ Entomol. 2007 Jun;100(3):808-14. doi: 10.1603/0022-0493(2007)100[808:npoctc]2.0.co;2. PMID: 17598542  | 
                    
| 7 | 
                             Landscape epidemiology of bean pod mottle comovirus: molecular evidence of heterogeneous sources. Bradshaw JD, et al. Arch Virol. 2011 Sep;156(9):1615-9. doi: 10.1007/s00705-011-1005-0. Epub 2011 May 12. PMID: 21562882  | 
                    
| 8 | 
                             Complete nucleotide sequence and experimental host range of Okra mosaic virus. Stephan D, et al. Virus Genes. 2008 Feb;36(1):231-40. doi: 10.1007/s11262-007-0181-1. Epub 2007 Nov 30. PMID: 18049886  | 
                    
| 9 | 
                            
                             Paul HL, et al. Intervirology. 1980;13(2):99-109. doi: 10.1159/000149114. PMID: 7372445  |