Datura leaf curl virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_004788495.1
Isolate Sudan
Release date 2019/6/28
Submitter Mohammed,H.S., El Siddig,M.A., El Hussein,A.A., Navas-Castillo,J., Fiallo-Olive,E., Mohammed,H.
Host
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_043531
ACCGGATGGCCGCGCCCCGCTTTTTGTGGTGGTCCCATGTGGGTCCCACACACTTTGCTATCAACCAATGAAATTGCAGCCTCAAACGTTAGATAATTGTTCATTTGTCTTTATATACTTGGTCCCCAAGTATTTTGTCTTGCAATATGTGGGACCCACTACTAAATGAATTTCCTGAATCCGTTCACGGATTTCGTTGTATGTTAGCTATTAAATATTTGCAGGCCGTTGAGGAAACGTATGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTTATATCTGTTGTTAGGGCCCGTGACTATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGCCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGCTGCCCCCATTGTCCAAGGCACAAACAGGCGCCGATCATGGACGTACAGGCCCATGTACCGAAAGCCCAGAATATACAGAATGTATCGAAGCCCTGATGTTCCCCGTGGATGTGAAGGCCCATGTAAGGTGCAGTCTTATGAGCAACGGGATGATATTAAGCATACTGGTATTGTTCGTTGTGTTAGTGATGTTACTCGTGGATCCGGAATTACCCACAGAGTGGGTAAGAGGTTCTGTGTTAAATCGATATATTTTTTAGGTAAAGTCTGGATGGATGAAAATATCAAGAAGCAGAATCACACTAATCAGGTCATGTTCTTTTTGGTCCGTGATAGAAGGCCCTATGGAAACAGCCCAATGGATTTTGGACAGGTTTTTAATATGTTCGATAATGAGCCCAGTACCGCAACCGTGAAGAATGATTTGCGGGATAGGTTTCAAGTGATGAGGAAATTTCATGCTACAGTCATTGGTGGGCCCTCTGGAATGAAGGAACAGGCTTTAGTTAAGAGATTTTTTAGAATTAACAGTCATGTAACTTATAATCATCAGGAGGCAGCCAAGTACGAGAATCATACTGAAAACGCCTTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCAGTGTATGCAACTATGAAAATACGAATCTATTTTTATGATTCGGTCAGCAATTAATAAACATTAAATTTTATTAAATTAGACTGCTCAACACTGTCAGTCCCATCGAGTACATTGTACAATACATGCTCTACGGCTTTTACAACTGTATTAATACTTATAATCCCTAAACTATCGAGGTATTTTAATACTTGGGTTTTAAATACCCTCAAGAAATGCCAGGTCTGAGGGTGTAAGGTCGTCCAGACCTGGAAATCCATCCAGCATTGGTGTAGTCCCAACGCTTTCCTCAGCTTGTGGTTGAATCGTATCTGGATGGTTATTATGTCCATCGTCATTCCGAATGATTTGTTGTCGTGCTGGATGATCTTGAAATAGAGGGGATTTGTTACCTCCCAGATAAAGACGCCATTCAGCGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATGTGTACGTAGTATGAGCACCCACAATTTAGATCAACCCTCTTACGCCGGATGGCTCTACGCTTAGCAGCTCTGTGTTGGACCTTGATTGGTACCTGAGTATAGTGGCTCTTCGAGGGAGATGAAGGTTGCATTTTTTAGTGCCCAGGCTTTTAATGCGCAATTCTTTTCTTCGTCCAGGAACTCTTTATAGCTGGAATTGGGCCCTGGATTGCAGAGGAAGATAGTTGGAATTCCCCCTTTAATTTGAATGGGCTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCCTTGAAGTGCTTTAAATAATGCGGGTCTACGTCATCAATTACATTGTACCACGCATCATTACTGTACACCTTTGGACTTAGGTCTAGATGTCCACACAAATAATTATGTGGGCCTAGAGACCTGGCCCACATTGTTTTGCCGGTTCTGCTATCACCCTCGATGACAATACTATTAGGTCTCCATGGCCGCGCAGCGGCATCCATGACATTCTCAGACACCCATTCCTCTATGGCCTCTGGAACTTGATCAAAGGAAGAAGAAAGAAAAGGGGAAACATAAACCTCCTTTGGAGGTGCAAAAATCCTATCTAAATTATTTTTTAAATTATGATATTGAAAAATAAAATCTTTAGGGAGTTTCTCCCTAATTATTGCCAGAGCAACATCAGCGGAACCTGAATTCAGGGCCTCTGCTGCAGCATCATTAGCTGTCTGTTGACCTCCTCTAGCAGATCTTCCATCGACCTGAAATTGACCCCAGTCGATGTAATCACCGTCCTTCTCGATGTATGACTTGACATCGGATGAGGACTTAGCTCCCTGGAAATTTGGGTGGAATTGGGAGGAGTTATGAGGGTGAGTGACATCGAAATGTCTGGGGTTTCTGAACTGGGCCTTACCCTTGAACTGGATGAGAGCATGGATATGCAGAGACCCATCTTGGTGTTTTTCTTGTGCCACTCGGATAAATAATTTATCTGATGGACAGTGTATGGATTTGATGAGTTCGAGCATTTGCTCTTTTGGGATTGGGCATTTTGGATATGTAAGGAATATGTTTTTTGCTTTAACTTGGAAGGAATTAACACGTGGCATATTGAATTGGGTGCTCTCGAAACTCTGTGGGAATTGGGGGCTTTGGGTGCCCATTTATATGGAGCACCCAAATGGCAAATTGGTAATTTTAGAACTTTAATTTGAAATTTGAAATTCAAAATTCAAATTTTAAATCCCCAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession YP_009666811.1
Location 147-497
Gene Name AV2
Protein Name AV2 protein
Coding Region ATGTGGGACCCACTACTAAATGAATTTCCTGAATCCGTTCACGGATTTCGTTGTATGTTAGCTATTAAATATTTGCAGGCCGTTGAGGAAACGTATGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTTATATCTGTTGTTAGGGCCCGTGACTATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGCCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGCTGCCCCCATTGTCCAAGGCACAAACAGGCGCCGATCATGGACGTACAGGCCCATGTACCGAAAGCCCAGAATATACAGAATGTATCGAAGCCCTGA
Protein Sequence MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDLISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQAPIMDVQAHVPKAQNIQNVSKP

NCBI Accession YP_009666812.1
Location 307-1083
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGCCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGCTGCCCCCATTGTCCAAGGCACAAACAGGCGCCGATCATGGACGTACAGGCCCATGTACCGAAAGCCCAGAATATACAGAATGTATCGAAGCCCTGATGTTCCCCGTGGATGTGAAGGCCCATGTAAGGTGCAGTCTTATGAGCAACGGGATGATATTAAGCATACTGGTATTGTTCGTTGTGTTAGTGATGTTACTCGTGGATCCGGAATTACCCACAGAGTGGGTAAGAGGTTCTGTGTTAAATCGATATATTTTTTAGGTAAAGTCTGGATGGATGAAAATATCAAGAAGCAGAATCACACTAATCAGGTCATGTTCTTTTTGGTCCGTGATAGAAGGCCCTATGGAAACAGCCCAATGGATTTTGGACAGGTTTTTAATATGTTCGATAATGAGCCCAGTACCGCAACCGTGAAGAATGATTTGCGGGATAGGTTTCAAGTGATGAGGAAATTTCATGCTACAGTCATTGGTGGGCCCTCTGGAATGAAGGAACAGGCTTTAGTTAAGAGATTTTTTAGAATTAACAGTCATGTAACTTATAATCATCAGGAGGCAGCCAAGTACGAGAATCATACTGAAAACGCCTTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCAGTGTATGCAACTATGAAAATACGAATCTATTTTTATGATTCGGTCAGCAATTAA
Protein Sequence MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGTNRRRSWTYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITHRVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATMKIRIYFYDSVSN

NCBI Accession YP_009666813.1
Location 1080-1484
Gene Name AC3
Protein Name replication enhancer protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCGCTGAATGGCGTCTTTATCTGGGAGGTAACAAATCCCCTCTATTTCAAGATCATCCAGCACGACAACAAATCATTCGGAATGACGATGGACATAATAACCATCCAGATACGATTCAACCACAAGCTGAGGAAAGCGTTGGGACTACACCAATGCTGGATGGATTTCCAGGTCTGGACGACCTTACACCCTCAGACCTGGCATTTCTTGAGGGTATTTAAAACCCAAGTATTAAAATACCTCGATAGTTTAGGGATTATAAGTATTAATACAGTTGTAAAAGCCGTAGAGCATGTATTGTACAATGTACTCGATGGGACTGACAGTGTTGAGCAGTCTAATTTAATAAAATTTAATGTTTATTAA
Protein Sequence MDSRTGELITAAQALNGVFIWEVTNPLYFKIIQHDNKSFGMTMDIITIQIRFNHKLRKALGLHQCWMDFQVWTTLHPQTWHFLRVFKTQVLKYLDSLGIISINTVVKAVEHVLYNVLDGTDSVEQSNLIKFNVY

NCBI Accession YP_009666814.1
Location 1225-1632
Gene Name AC2
Protein Name transcriptional activator protein
Coding Region ATGCAACCTTCATCTCCCTCGAAGAGCCACTATACTCAGGTACCAATCAAGGTCCAACACAGAGCTGCTAAGCGTAGAGCCATCCGGCGTAAGAGGGTTGATCTAAATTGTGGGTGCTCATACTACGTACACATCAACTGCCACAACCATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCGCTGAATGGCGTCTTTATCTGGGAGGTAACAAATCCCCTCTATTTCAAGATCATCCAGCACGACAACAAATCATTCGGAATGACGATGGACATAATAACCATCCAGATACGATTCAACCACAAGCTGAGGAAAGCGTTGGGACTACACCAATGCTGGATGGATTTCCAGGTCTGGACGACCTTACACCCTCAGACCTGGCATTTCTTGAGGGTATTTAA
Protein Sequence MQPSSPSKSHYTQVPIKVQHRAAKRRAIRRKRVDLNCGCSYYVHINCHNHGFTHRGTHHCSSSAEWRLYLGGNKSPLFQDHPARQQIIRNDDGHNNHPDTIQPQAEESVGTTPMLDGFPGLDDLTPSDLAFLEGI

NCBI Accession YP_009666815.1
Location 1562-2674
Gene Name AC1
Protein Name replication-associated protein
Coding Region ATGGGCACCCAAAGCCCCCAATTCCCACAGAGTTTCGAGAGCACCCAATTCAATATGCCACGTGTTAATTCCTTCCAAGTTAAAGCAAAAAACATATTCCTTACATATCCAAAATGCCCAATCCCAAAAGAGCAAATGCTCGAACTCATCAAATCCATACACTGTCCATCAGATAAATTATTTATCCGAGTGGCACAAGAAAAACACCAAGATGGGTCTCTGCATATCCATGCTCTCATCCAGTTCAAGGGTAAGGCCCAGTTCAGAAACCCCAGACATTTCGATGTCACTCACCCTCATAACTCCTCCCAATTCCACCCAAATTTCCAGGGAGCTAAGTCCTCATCCGATGTCAAGTCATACATCGAGAAGGACGGTGATTACATCGACTGGGGTCAATTTCAGGTCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCCTGAATTCAGGTTCCGCTGATGTTGCTCTGGCAATAATTAGGGAGAAACTCCCTAAAGATTTTATTTTTCAATATCATAATTTAAAAAATAATTTAGATAGGATTTTTGCACCTCCAAAGGAGGTTTATGTTTCCCCTTTTCTTTCTTCTTCCTTTGATCAAGTTCCAGAGGCCATAGAGGAATGGGTGTCTGAGAATGTCATGGATGCCGCTGCGCGGCCATGGAGACCTAATAGTATTGTCATCGAGGGTGATAGCAGAACCGGCAAAACAATGTGGGCCAGGTCTCTAGGCCCACATAATTATTTGTGTGGACATCTAGACCTAAGTCCAAAGGTGTACAGTAATGATGCGTGGTACAATGTAATTGATGACGTAGACCCGCATTATTTAAAGCACTTCAAGGAATTCATGGGGGCCCAGAGGGACTGGCAAAGCAACACAAAGTACGGGAAGCCCATTCAAATTAAAGGGGGAATTCCAACTATCTTCCTCTGCAATCCAGGGCCCAATTCCAGCTATAAAGAGTTCCTGGACGAAGAAAAGAATTGCGCATTAAAAGCCTGGGCACTAAAAAATGCAACCTTCATCTCCCTCGAAGAGCCACTATACTCAGGTACCAATCAAGGTCCAACACAGAGCTGCTAA
Protein Sequence MGTQSPQFPQSFESTQFNMPRVNSFQVKAKNIFLTYPKCPIPKEQMLELIKSIHCPSDKLFIRVAQEKHQDGSLHIHALIQFKGKAQFRNPRHFDVTHPHNSSQFHPNFQGAKSSSDVKSYIEKDGDYIDWGQFQVDGRSARGGQQTANDAAAEALNSGSADVALAIIREKLPKDFIFQYHNLKNNLDRIFAPPKEVYVSPFLSSSFDQVPEAIEEWVSENVMDAAARPWRPNSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEFLDEEKNCALKAWALKNATFISLEEPLYSGTNQGPTQSC

NCBI Accession YP_009666816.1
Location 2206-2463
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGTCTCTGCATATCCATGCTCTCATCCAGTTCAAGGGTAAGGCCCAGTTCAGAAACCCCAGACATTTCGATGTCACTCACCCTCATAACTCCTCCCAATTCCACCCAAATTTCCAGGGAGCTAAGTCCTCATCCGATGTCAAGTCATACATCGAGAAGGACGGTGATTACATCGACTGGGGTCAATTTCAGGTCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCCTGA
Protein Sequence MGLCISMLSSSSRVRPSSETPDISMSLTLITPPNSTQISRELSPHPMSSHTSRRTVITSTGVNFRSMEDLLEEVNRQLMMLQQRP

References More References in PubMed

1

Tomato yellow leaf curl viruses: menage a trois between the virus complex, the plant and the whitefly vector.

Díaz-Pendón JA, et al.  Mol Plant Pathol. 2010 Jul;11(4):441-50. doi: 10.1111/j.1364-3703.2010.00618.x.

PMID: 20618703
2

Complete genome sequence of datura leaf curl virus, a novel begomovirus infecting Datura innoxia in Sudan, related to begomoviruses causing tomato yellow leaf curl disease.

Mohammed HS, et al.  Arch Virol. 2018 Jan;163(1):273-275. doi: 10.1007/s00705-017-3574-z. Epub 2017 Oct 4.

PMID: 28980080
3

A Novel Strain of the Begomovirus Tomato Leaf Curl Sudan Virus Infecting Datura stramonium in Sudan.

Mohammed HS, et al.  Plant Dis. 2018 Sep;102(9):1863. doi: 10.1094/PDIS-01-18-0195-PDN. Epub 2018 Jul 6.

PMID: 30125192
4

Cross species transmission and recombination dynamics of chilli leaf curl virus: implications for host range expansion and LAMP-based detection.

Devaraj, et al.  3 Biotech. 2025 Aug;15(8):260. doi: 10.1007/s13205-025-04434-y. Epub 2025 Jul 19.

PMID: 40693173
5

A severe symptom phenotype in tomato in Mali is caused by a reassortant between a novel recombinant begomovirus (Tomato yellow leaf curl Mali virus) and a betasatellite.

Chen LF, et al.  Mol Plant Pathol. 2009 May;10(3):415-30. doi: 10.1111/j.1364-3703.2009.00541.x.

PMID: 19400843
6

Occurrence of Sweet potato feathery mottle virus and Sweet potato leaf curl Georgia virus on Sweet Potato in India.

Prasanth G, et al.  Plant Dis. 2008 Feb;92(2):311. doi: 10.1094/PDIS-92-2-0311B.

PMID: 30769415
7

Three years survey of Tomato yellow leaf curl Sardinia virus reservoir weed hosts in southern Italy.

Fanigliulo A, et al.  Commun Agric Appl Biol Sci. 2007;72(4):1023-8.

PMID: 18396845
8

Natural Hosts and Genetic Diversity of the Emerging Tomato Leaf Curl New Delhi Virus in Spain.

Juárez M, et al.  Front Microbiol. 2019 Feb 20;10:140. doi: 10.3389/fmicb.2019.00140. eCollection 2019.

PMID: 30842757
9

Biolistic inoculation of plants with tomato yellow leaf curl virus DNA.

Lapidot M, et al.  J Virol Methods. 2007 Sep;144(1-2):143-8. doi: 10.1016/j.jviromet.2007.04.011. Epub 2007 Jun 15.

PMID: 17573131
10

Two genetically related begomoviruses causing tomato leaf curl disease in Togo and Nigeria differ in virulence and host range but do not require a betasatellite for induction of disease symptoms.

Kon T, et al.  Arch Virol. 2012 Jan;157(1):107-20. doi: 10.1007/s00705-011-1139-0. Epub 2011 Nov 5.

PMID: 22057578