Datura leaf curl virus
Basic Information
| Genus |
Begomovirus
|
| NCBI Assembly |
GCF_004788495.1 |
| Isolate |
Sudan |
| Release date |
2019/6/28 |
| Submitter |
Mohammed,H.S., El Siddig,M.A., El Hussein,A.A., Navas-Castillo,J., Fiallo-Olive,E., Mohammed,H. |
| Host |
|
| Vector |
|
| Download |
Genome
|GFF3
|PEP
|CDS |
Genomic Organization
JBrowse
Genome
ACCGGATGGCCGCGCCCCGCTTTTTGTGGTGGTCCCATGTGGGTCCCACACACTTTGCTATCAACCAATGAAATTGCAGCCTCAAACGTTAGATAATTGTTCATTTGTCTTTATATACTTGGTCCCCAAGTATTTTGTCTTGCAATATGTGGGACCCACTACTAAATGAATTTCCTGAATCCGTTCACGGATTTCGTTGTATGTTAGCTATTAAATATTTGCAGGCCGTTGAGGAAACGTATGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTTATATCTGTTGTTAGGGCCCGTGACTATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGCCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGCTGCCCCCATTGTCCAAGGCACAAACAGGCGCCGATCATGGACGTACAGGCCCATGTACCGAAAGCCCAGAATATACAGAATGTATCGAAGCCCTGATGTTCCCCGTGGATGTGAAGGCCCATGTAAGGTGCAGTCTTATGAGCAACGGGATGATATTAAGCATACTGGTATTGTTCGTTGTGTTAGTGATGTTACTCGTGGATCCGGAATTACCCACAGAGTGGGTAAGAGGTTCTGTGTTAAATCGATATATTTTTTAGGTAAAGTCTGGATGGATGAAAATATCAAGAAGCAGAATCACACTAATCAGGTCATGTTCTTTTTGGTCCGTGATAGAAGGCCCTATGGAAACAGCCCAATGGATTTTGGACAGGTTTTTAATATGTTCGATAATGAGCCCAGTACCGCAACCGTGAAGAATGATTTGCGGGATAGGTTTCAAGTGATGAGGAAATTTCATGCTACAGTCATTGGTGGGCCCTCTGGAATGAAGGAACAGGCTTTAGTTAAGAGATTTTTTAGAATTAACAGTCATGTAACTTATAATCATCAGGAGGCAGCCAAGTACGAGAATCATACTGAAAACGCCTTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCAGTGTATGCAACTATGAAAATACGAATCTATTTTTATGATTCGGTCAGCAATTAATAAACATTAAATTTTATTAAATTAGACTGCTCAACACTGTCAGTCCCATCGAGTACATTGTACAATACATGCTCTACGGCTTTTACAACTGTATTAATACTTATAATCCCTAAACTATCGAGGTATTTTAATACTTGGGTTTTAAATACCCTCAAGAAATGCCAGGTCTGAGGGTGTAAGGTCGTCCAGACCTGGAAATCCATCCAGCATTGGTGTAGTCCCAACGCTTTCCTCAGCTTGTGGTTGAATCGTATCTGGATGGTTATTATGTCCATCGTCATTCCGAATGATTTGTTGTCGTGCTGGATGATCTTGAAATAGAGGGGATTTGTTACCTCCCAGATAAAGACGCCATTCAGCGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGTTGATGTGTACGTAGTATGAGCACCCACAATTTAGATCAACCCTCTTACGCCGGATGGCTCTACGCTTAGCAGCTCTGTGTTGGACCTTGATTGGTACCTGAGTATAGTGGCTCTTCGAGGGAGATGAAGGTTGCATTTTTTAGTGCCCAGGCTTTTAATGCGCAATTCTTTTCTTCGTCCAGGAACTCTTTATAGCTGGAATTGGGCCCTGGATTGCAGAGGAAGATAGTTGGAATTCCCCCTTTAATTTGAATGGGCTTCCCGTACTTTGTGTTGCTTTGCCAGTCCCTCTGGGCCCCCATGAATTCCTTGAAGTGCTTTAAATAATGCGGGTCTACGTCATCAATTACATTGTACCACGCATCATTACTGTACACCTTTGGACTTAGGTCTAGATGTCCACACAAATAATTATGTGGGCCTAGAGACCTGGCCCACATTGTTTTGCCGGTTCTGCTATCACCCTCGATGACAATACTATTAGGTCTCCATGGCCGCGCAGCGGCATCCATGACATTCTCAGACACCCATTCCTCTATGGCCTCTGGAACTTGATCAAAGGAAGAAGAAAGAAAAGGGGAAACATAAACCTCCTTTGGAGGTGCAAAAATCCTATCTAAATTATTTTTTAAATTATGATATTGAAAAATAAAATCTTTAGGGAGTTTCTCCCTAATTATTGCCAGAGCAACATCAGCGGAACCTGAATTCAGGGCCTCTGCTGCAGCATCATTAGCTGTCTGTTGACCTCCTCTAGCAGATCTTCCATCGACCTGAAATTGACCCCAGTCGATGTAATCACCGTCCTTCTCGATGTATGACTTGACATCGGATGAGGACTTAGCTCCCTGGAAATTTGGGTGGAATTGGGAGGAGTTATGAGGGTGAGTGACATCGAAATGTCTGGGGTTTCTGAACTGGGCCTTACCCTTGAACTGGATGAGAGCATGGATATGCAGAGACCCATCTTGGTGTTTTTCTTGTGCCACTCGGATAAATAATTTATCTGATGGACAGTGTATGGATTTGATGAGTTCGAGCATTTGCTCTTTTGGGATTGGGCATTTTGGATATGTAAGGAATATGTTTTTTGCTTTAACTTGGAAGGAATTAACACGTGGCATATTGAATTGGGTGCTCTCGAAACTCTGTGGGAATTGGGGGCTTTGGGTGCCCATTTATATGGAGCACCCAAATGGCAAATTGGTAATTTTAGAACTTTAATTTGAAATTTGAAATTCAAAATTCAAATTTTAAATCCCCAAAGCGGCCATCCGTATAATATT
Gene Information
|
NCBI Accession
|
YP_009666811.1
|
|
Location
|
147-497 |
|
Gene Name
|
AV2 |
|
Protein Name
|
AV2 protein |
|
Coding Region
|
ATGTGGGACCCACTACTAAATGAATTTCCTGAATCCGTTCACGGATTTCGTTGTATGTTAGCTATTAAATATTTGCAGGCCGTTGAGGAAACGTATGAGCCCAATACTTTGGGCCACGATTTAATTAGGGATCTTATATCTGTTGTTAGGGCCCGTGACTATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGCCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGCTGCCCCCATTGTCCAAGGCACAAACAGGCGCCGATCATGGACGTACAGGCCCATGTACCGAAAGCCCAGAATATACAGAATGTATCGAAGCCCTGA |
|
Protein Sequence
|
MWDPLLNEFPESVHGFRCMLAIKYLQAVEETYEPNTLGHDLIRDLISVVRARDYVEATRRYNHFHARLEGSPKAELRQPIQQPCCCPHCPRHKQAPIMDVQAHVPKAQNIQNVSKP |
|
NCBI Accession
|
YP_009666812.1
|
|
Location
|
307-1083 |
|
Gene Name
|
AV1 |
|
Protein Name
|
coat protein |
|
Coding Region
|
ATGTCGAAGCGACCCGGCGATATAATCATTTCCACGCCCGTCTCGAAGGTTCGCCGAAGGCTGAACTTCGACAGCCCATACAGCAGCCGTGCTGCTGCCCCCATTGTCCAAGGCACAAACAGGCGCCGATCATGGACGTACAGGCCCATGTACCGAAAGCCCAGAATATACAGAATGTATCGAAGCCCTGATGTTCCCCGTGGATGTGAAGGCCCATGTAAGGTGCAGTCTTATGAGCAACGGGATGATATTAAGCATACTGGTATTGTTCGTTGTGTTAGTGATGTTACTCGTGGATCCGGAATTACCCACAGAGTGGGTAAGAGGTTCTGTGTTAAATCGATATATTTTTTAGGTAAAGTCTGGATGGATGAAAATATCAAGAAGCAGAATCACACTAATCAGGTCATGTTCTTTTTGGTCCGTGATAGAAGGCCCTATGGAAACAGCCCAATGGATTTTGGACAGGTTTTTAATATGTTCGATAATGAGCCCAGTACCGCAACCGTGAAGAATGATTTGCGGGATAGGTTTCAAGTGATGAGGAAATTTCATGCTACAGTCATTGGTGGGCCCTCTGGAATGAAGGAACAGGCTTTAGTTAAGAGATTTTTTAGAATTAACAGTCATGTAACTTATAATCATCAGGAGGCAGCCAAGTACGAGAATCATACTGAAAACGCCTTGTTATTGTATATGGCATGTACGCATGCCTCTAATCCAGTGTATGCAACTATGAAAATACGAATCTATTTTTATGATTCGGTCAGCAATTAA |
|
Protein Sequence
|
MSKRPGDIIISTPVSKVRRRLNFDSPYSSRAAAPIVQGTNRRRSWTYRPMYRKPRIYRMYRSPDVPRGCEGPCKVQSYEQRDDIKHTGIVRCVSDVTRGSGITHRVGKRFCVKSIYFLGKVWMDENIKKQNHTNQVMFFLVRDRRPYGNSPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMRKFHATVIGGPSGMKEQALVKRFFRINSHVTYNHQEAAKYENHTENALLLYMACTHASNPVYATMKIRIYFYDSVSN |
|
NCBI Accession
|
YP_009666813.1
|
|
Location
|
1080-1484 |
|
Gene Name
|
AC3 |
|
Protein Name
|
replication enhancer protein |
|
Coding Region
|
ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCGCTGAATGGCGTCTTTATCTGGGAGGTAACAAATCCCCTCTATTTCAAGATCATCCAGCACGACAACAAATCATTCGGAATGACGATGGACATAATAACCATCCAGATACGATTCAACCACAAGCTGAGGAAAGCGTTGGGACTACACCAATGCTGGATGGATTTCCAGGTCTGGACGACCTTACACCCTCAGACCTGGCATTTCTTGAGGGTATTTAAAACCCAAGTATTAAAATACCTCGATAGTTTAGGGATTATAAGTATTAATACAGTTGTAAAAGCCGTAGAGCATGTATTGTACAATGTACTCGATGGGACTGACAGTGTTGAGCAGTCTAATTTAATAAAATTTAATGTTTATTAA |
|
Protein Sequence
|
MDSRTGELITAAQALNGVFIWEVTNPLYFKIIQHDNKSFGMTMDIITIQIRFNHKLRKALGLHQCWMDFQVWTTLHPQTWHFLRVFKTQVLKYLDSLGIISINTVVKAVEHVLYNVLDGTDSVEQSNLIKFNVY |
|
NCBI Accession
|
YP_009666814.1
|
|
Location
|
1225-1632 |
|
Gene Name
|
AC2 |
|
Protein Name
|
transcriptional activator protein |
|
Coding Region
|
ATGCAACCTTCATCTCCCTCGAAGAGCCACTATACTCAGGTACCAATCAAGGTCCAACACAGAGCTGCTAAGCGTAGAGCCATCCGGCGTAAGAGGGTTGATCTAAATTGTGGGTGCTCATACTACGTACACATCAACTGCCACAACCATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCGCTGAATGGCGTCTTTATCTGGGAGGTAACAAATCCCCTCTATTTCAAGATCATCCAGCACGACAACAAATCATTCGGAATGACGATGGACATAATAACCATCCAGATACGATTCAACCACAAGCTGAGGAAAGCGTTGGGACTACACCAATGCTGGATGGATTTCCAGGTCTGGACGACCTTACACCCTCAGACCTGGCATTTCTTGAGGGTATTTAA |
|
Protein Sequence
|
MQPSSPSKSHYTQVPIKVQHRAAKRRAIRRKRVDLNCGCSYYVHINCHNHGFTHRGTHHCSSSAEWRLYLGGNKSPLFQDHPARQQIIRNDDGHNNHPDTIQPQAEESVGTTPMLDGFPGLDDLTPSDLAFLEGI |
|
NCBI Accession
|
YP_009666815.1
|
|
Location
|
1562-2674 |
|
Gene Name
|
AC1 |
|
Protein Name
|
replication-associated protein |
|
Coding Region
|
ATGGGCACCCAAAGCCCCCAATTCCCACAGAGTTTCGAGAGCACCCAATTCAATATGCCACGTGTTAATTCCTTCCAAGTTAAAGCAAAAAACATATTCCTTACATATCCAAAATGCCCAATCCCAAAAGAGCAAATGCTCGAACTCATCAAATCCATACACTGTCCATCAGATAAATTATTTATCCGAGTGGCACAAGAAAAACACCAAGATGGGTCTCTGCATATCCATGCTCTCATCCAGTTCAAGGGTAAGGCCCAGTTCAGAAACCCCAGACATTTCGATGTCACTCACCCTCATAACTCCTCCCAATTCCACCCAAATTTCCAGGGAGCTAAGTCCTCATCCGATGTCAAGTCATACATCGAGAAGGACGGTGATTACATCGACTGGGGTCAATTTCAGGTCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCCTGAATTCAGGTTCCGCTGATGTTGCTCTGGCAATAATTAGGGAGAAACTCCCTAAAGATTTTATTTTTCAATATCATAATTTAAAAAATAATTTAGATAGGATTTTTGCACCTCCAAAGGAGGTTTATGTTTCCCCTTTTCTTTCTTCTTCCTTTGATCAAGTTCCAGAGGCCATAGAGGAATGGGTGTCTGAGAATGTCATGGATGCCGCTGCGCGGCCATGGAGACCTAATAGTATTGTCATCGAGGGTGATAGCAGAACCGGCAAAACAATGTGGGCCAGGTCTCTAGGCCCACATAATTATTTGTGTGGACATCTAGACCTAAGTCCAAAGGTGTACAGTAATGATGCGTGGTACAATGTAATTGATGACGTAGACCCGCATTATTTAAAGCACTTCAAGGAATTCATGGGGGCCCAGAGGGACTGGCAAAGCAACACAAAGTACGGGAAGCCCATTCAAATTAAAGGGGGAATTCCAACTATCTTCCTCTGCAATCCAGGGCCCAATTCCAGCTATAAAGAGTTCCTGGACGAAGAAAAGAATTGCGCATTAAAAGCCTGGGCACTAAAAAATGCAACCTTCATCTCCCTCGAAGAGCCACTATACTCAGGTACCAATCAAGGTCCAACACAGAGCTGCTAA |
|
Protein Sequence
|
MGTQSPQFPQSFESTQFNMPRVNSFQVKAKNIFLTYPKCPIPKEQMLELIKSIHCPSDKLFIRVAQEKHQDGSLHIHALIQFKGKAQFRNPRHFDVTHPHNSSQFHPNFQGAKSSSDVKSYIEKDGDYIDWGQFQVDGRSARGGQQTANDAAAEALNSGSADVALAIIREKLPKDFIFQYHNLKNNLDRIFAPPKEVYVSPFLSSSFDQVPEAIEEWVSENVMDAAARPWRPNSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEFLDEEKNCALKAWALKNATFISLEEPLYSGTNQGPTQSC |
|
NCBI Accession
|
YP_009666816.1
|
|
Location
|
2206-2463 |
|
Gene Name
|
AC4 |
|
Protein Name
|
AC4 protein |
|
Coding Region
|
ATGGGTCTCTGCATATCCATGCTCTCATCCAGTTCAAGGGTAAGGCCCAGTTCAGAAACCCCAGACATTTCGATGTCACTCACCCTCATAACTCCTCCCAATTCCACCCAAATTTCCAGGGAGCTAAGTCCTCATCCGATGTCAAGTCATACATCGAGAAGGACGGTGATTACATCGACTGGGGTCAATTTCAGGTCGATGGAAGATCTGCTAGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCCTGA |
|
Protein Sequence
|
MGLCISMLSSSSRVRPSSETPDISMSLTLITPPNSTQISRELSPHPMSSHTSRRTVITSTGVNFRSMEDLLEEVNRQLMMLQQRP |