Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000837305.1 |
Isolate | USA: Imperial Valley of California |
Release date | 2015/2/12 |
Submitter | Guzman,P., Sudarshana,M.R., Seo,Y.-S., Rojas,M.R., Natwick,E., Turini,T., Mayberry,K., Gilbertson,R.L., Hernandez,N.A. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_148985.1 |
---|---|
Location | 217-966 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCGAAGCGCGATGCCCCATGGCGTTCATTGGCGGGGACCTCAAAGGTTTCCCGCTCTGCTAACTATACTCCACGTGGAGGTCCTAAATTGGACAAGGCCGCTGTGTGGGTCAACCGGCCCATGTACCGGAAGCCCAGGATCTATCGGACATTCAAGAGTCCCGATGTTCCCAAGGGTTGTGAAGGGCCGTGTAAGGTTCAGTCTTTCGAGCAGCGGCATGATATATCTCATGTTGGGAAGGTGATGTGCATATCTGACGTGACCCGTGGTAACGGTATTACTCATCGCGTGGGGAAACGTTTTTGTGTTAAGTCTGTATATATTTTAGGGAAGATCTGGATGGACGAAAACATCAAGTTGAAGAACCACACTAACAGCGTTATTTTCTGGTTGGTAAGAGACCGTCGACCGTATAGTTCTCCTATGGATTTCGGCCAAGTGTTCAACATGTTCGACAACGAGCCTAGTACTGCAACCGTTAAGAACGATCTCCGCGATCGTTTTCAAGTGATGCACAGGTTCTATGCAAAGGTCACTGGTGGTCAATATGCGAGCAACGAGCAAGCCTTAGTTAGGCGATTTTGGAAGGTCAACAACCACGTAGTCTACAACCACCAGGAAGCAGGAAAATACGAAAATCATACTGAGAACGCTTTGTTATTGTATATGGCATGTACGCATGCCTCTAACCCCGTGTATGCGACATTGAAAATTCGGATCTATTTTTATGATTCGATAACAAATTAA |
Protein Sequence | MPKRDAPWRSLAGTSKVSRSANYTPRGGPKLDKAAVWVNRPMYRKPRIYRTFKSPDVPKGCEGPCKVQSFEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVIFWLVRDRRPYSSPMDFGQVFNMFDNEPSTATVKNDLRDRFQVMHRFYAKVTGGQYASNEQALVRRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
NCBI Accession | NP_148986.1 |
---|---|
Location | 963-1361 |
Gene Name | AC3 |
Protein Name | Ren protein |
Coding Region | ATGGATTCACGCACAGAGGAACGCATCACGCGGTTTCAGGCAGAGAATTCCGCTTTTATCTGGGACGTTCCAAATCCCCTCTATTTCAAGATGTACAACGTAGAGGACCCAATCTACACAACAACGAGGATATTCCACATCCAGATCAGATTCAACCACAACCTCAGGAGAGCACTAAATCTTCACAAAGCATTCCTGAACTTCCAAATCTGGACGACATTACGTCAAGTTTCTGGGACGACTTATTTAAAATGGTTTAAACATTTAGTGCTTCTGTATTTAGATAGATTAGGTGTTGTTGGACTGAATAATGTAATACGAGCTGTTGTATTTGCAACTGATAAACCATATGTAAACTATGTACTCGAAAATCATGATATAAAATTCAAATTTTATTAA |
Protein Sequence | MDSRTEERITRFQAENSAFIWDVPNPLYFKMYNVEDPIYTTTRIFHIQIRFNHNLRRALNLHKAFLNFQIWTTLRQVSGTTYLKWFKHLVLLYLDRLGVVGLNNVIRAVVFATDKPYVNYVLENHDIKFKFY |
NCBI Accession | NP_148987.1 |
---|---|
Location | 1102-1497 |
Gene Name | AC2 |
Protein Name | TrAP protein |
Coding Region | ATGCCCAGTTCATCTTCCTCGAAGGCCCCCTCTATCAAAGCACAGCACAGAGCAGCGAAGACTAGAGCCATCCGGCGTCGACGAATAGACTTGGACTGCGGTTGTTCAATATACCTGCATTTGAACTGTGCTGATTATGGATTCACGCACAGAGGAACGCATCACGCGGTTTCAGGCAGAGAATTCCGCTTTTATCTGGGACGTTCCAAATCCCCTCTATTTCAAGATGTACAACGTAGAGGACCCAATCTACACAACAACGAGGATATTCCACATCCAGATCAGATTCAACCACAACCTCAGGAGAGCACTAAATCTTCACAAAGCATTCCTGAACTTCCAAATCTGGACGACATTACGTCAAGTTTCTGGGACGACTTATTTAAAATGGTTTAA |
Protein Sequence | MPSSSSSKAPSIKAQHRAAKTRAIRRRRIDLDCGCSIYLHLNCADYGFTHRGTHHAVSGREFRFYLGRSKSPLFQDVQRRGPNLHNNEDIPHPDQIQPQPQESTKSSQSIPELPNLDDITSSFWDDLFKMV |
NCBI Accession | NP_148988.1 |
---|---|
Location | 1433-2488 |
Gene Name | AC1 |
Protein Name | Rep protein |
Coding Region | ATGCCACGGAACCCTAATTCCTTTCGTATATCAGCCAAGAACATTTTCTTAACATATCCTCAGTGCGACATTCCGAAAGATGAAGCTATTCAGATGCTTCAGCATCTTAACTGGTCAATCGTCAAACCGACGTATATCAGAGTCGCACGAGAGGAACATTCCGACGGGTTCCCGCACTTACACTGCCTCATTCAATTATCCGGTAAGTCTAACATCAAGGATGCTAGATTTTTCGACCTTGCTCACCCCAGAAGGTCTACCAGTTTTCACCCAAATGTTCAGGCAGCCAAAGACGCCAACGCCGTCAAGAATTACATCACCAAAGAAGGTGATTATTGTGAGTCCGGGAAATACAAGGTCTCTGGGGGTACAAAATCTAGCAAGGACGACGTCTATCACAACGCCATCAACGCAGGAAGTGCGGGAGAGGCTCTCGACATTATAAAAGCCGGTGATCCAAAAACGTTTATTGTGAACTATCATAACATAAAGGCTAACATCGAGCGCCTCTTTCATCAGCCACCTGAAACGTGGGCATGTCCATTTCCGTTATCATCGTTCACTCTCGTTCCAGAAGAGTTACAGGAGTGGGCTGATGATTATTTTGGGAGGGATGCCGCTGCGCGGCCAATGCGAGCTAGAAGTATAATCATAGAAGGTGACTCAAGAACGGGGAAGACGATGTGGTCCCGTTCGTTAGGCAAGCACAATTATCTTAGCGGTCACCTGGATTTCAATTCTAGGGTTTACTCAAACGAAGCCGAATATAACGTCATTGATGACGTCGCTCCGCAATACCTAAAGCTAAAGCACTGGAAAGAATTGATAGGGGCCCAAAGGGATTGGCAGTCCAACTGTAAATATGGAAAGCCAGTTCAAATTAAAGGAGGAATCCCATCAATCGTGCTGTGCAATCCAGGAGAGGGGGCATCTTATAAAGATTTCCTCGATAAAGAGGAAAATGAAAGCCTAAGAGAGTGGACGATCAAAAATGCCCAGTTCATCTTCCTCGAAGGCCCCCTCTATCAAAGCACAGCACAGAGCAGCGAAGACTAG |
Protein Sequence | MPRNPNSFRISAKNIFLTYPQCDIPKDEAIQMLQHLNWSIVKPTYIRVAREEHSDGFPHLHCLIQLSGKSNIKDARFFDLAHPRRSTSFHPNVQAAKDANAVKNYITKEGDYCESGKYKVSGGTKSSKDDVYHNAINAGSAGEALDIIKAGDPKTFIVNYHNIKANIERLFHQPPETWACPFPLSSFTLVPEELQEWADDYFGRDAAARPMRARSIIIEGDSRTGKTMWSRSLGKHNYLSGHLDFNSRVYSNEAEYNVIDDVAPQYLKLKHWKELIGAQRDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENESLREWTIKNAQFIFLEGPLYQSTAQSSED |
NCBI Accession | NP_148989.1 |
---|---|
Location | 521-1291 |
Gene Name | BV1 |
Protein Name | Nsp protein |
Coding Region | ATGTATTCGTCAGGCAGTAGACGTGGTCGTAGTTCTACACAACGACGGAGTTATTCACGGCGTACAGCTGTTAAACGTCATTATACTACATCACGTCTCGATGATAAACGTCGAACGAGCAATGCTGGTAAGGTACATGGTGAGGCGAAGATGTCACTGCAGCGTATACATGAGGACCAATTCGGCCCTGACTATGTGCTTCGACATAATACAGCGTTGTCGACGTTTATCACCTATCCTACTCTTCGCAAGAGTGAACCTAACCGTTCCAGGTCATATATAAAGTTAAAACGCCTGCGTTTTAAGGGAACTCTTAAGATTGAACGTGTAGAAACCGACATTAACATGGTTGGTTCACCTGCCAATATTGACGGAGTGTATTCTATCGTGATTGTGGTTGATCGTAAACCACATTTGACTTCGACTGGTTGTCTACCGACATTTGACGATTTATTTGGCGCGAGGATGCATAGTCACGGTAATTTATCAATAACGTCGTCTAATAAGCAGCGTTTCTATATCAGACATGTTATGAAGCGTGTACTATCTGTAGAGCGGAACACATTGATGATCGACATCGAAGGAACGACGACGTTTTCTAATAGGCGTTACAATTGTTGGTCCGCATTTAACGACAACGACCGTGATTCATGTAACGGTGTTTACGCTAACATCAGCAAGAACGCCATATTAGTTTATCATTGTTGGATGTCTGATGTAACGTCCAGCGCATCTACTTTTGTATCATACGACCTTGATTATTACGGATAA |
Protein Sequence | MYSSGSRRGRSSTQRRSYSRRTAVKRHYTTSRLDDKRRTSNAGKVHGEAKMSLQRIHEDQFGPDYVLRHNTALSTFITYPTLRKSEPNRSRSYIKLKRLRFKGTLKIERVETDINMVGSPANIDGVYSIVIVVDRKPHLTSTGCLPTFDDLFGARMHSHGNLSITSSNKQRFYIRHVMKRVLSVERNTLMIDIEGTTTFSNRRYNCWSAFNDNDRDSCNGVYANISKNAILVYHCWMSDVTSSASTFVSYDLDYYG |
NCBI Accession | NP_148990.1 |
---|---|
Location | 1479-2360 |
Gene Name | BC1 |
Protein Name | movement protein |
Coding Region | ATGTCAACGACGTTAGCTGCGGCACCTAACGCATTTAATTACATAGAATCGCGACGGGATGAGTATCGGCTATCTCATGACCTAACAGAAATTGTCCTGCAGTTTCCGTCGACGACTTCGCAAATTACTGCGAAACTGAGTCGTAGTTGTATGAAGATCGACCACTGTGTCATAGAATACAGGCAACAGGTTCCAATTAACGCCTCAGGAACGGTGATAGTGGAGATCCACGACAAACGCATGACTGACGACGAATCGTTGCAAGCGTCGTGGACATTTCCGATCAGATGCAATATAGATCTCCACTACTTCTCTGCGTCATTCTTCTCGCTAAAAGACCCAATTCCTTGGAAGTTATACTACAAGGTGTCAGATGCAAACGTTCATCAAATGACGCATTTCGCAAAATTCAAAGGCAAGCTAAAGCTGTCGTCGGCGAAACACTCAGTTGATATCCCCTTCCGGGCACCAACGGTGAAGTTGTTGTCGAAGCAATTCTGCGAGAAAGACGTTGATTTCTGGCACGTGGGTTACGGCAAGTGGGAGAGAAGACTGGTCAAATCCGCATCACTATCAAGAACTGGACTTAAGGGTCCAATTGAAATATGCCCAGGCGAGACCTGGGCTACAAAGAGCACAATTGTTACGAACAAATCAAATGCGGATTTGGGTATATCAGAAGAATTACTCCCGTATAGAGAACTTAACAGACTAGGAACAAGTGTATTAGATCCCGGAGATTCAGTTTCAATGGTCGGAATACAAAGGTCACAATCCAACATTACCATGTCAATGTCACAGCTGAACGAGTTAGTTAAATCGACAGTTCACGAGTGTATTAACAGTAGTTGTATTCCTCCGATACCAAAATCGTTAAATTAA |
Protein Sequence | MSTTLAAAPNAFNYIESRRDEYRLSHDLTEIVLQFPSTTSQITAKLSRSCMKIDHCVIEYRQQVPINASGTVIVEIHDKRMTDDESLQASWTFPIRCNIDLHYFSASFFSLKDPIPWKLYYKVSDANVHQMTHFAKFKGKLKLSSAKHSVDIPFRAPTVKLLSKQFCEKDVDFWHVGYGKWERRLVKSASLSRTGLKGPIEICPGETWATKSTIVTNKSNADLGISEELLPYRELNRLGTSVLDPGDSVSMVGIQRSQSNITMSMSQLNELVKSTVHECINSSCIPPIPKSLN |
1 |
Cucurbit leaf crumple virus (CuLCrV) associated to watermelon disease in Campeche state, Mexico. Rodríguez-Negrete EA, et al. Plant Dis. 2020 Dec 28. doi: 10.1094/PDIS-12-20-2551-PDN. Online ahead of print. PMID: 33369486 |
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2 |
Cucurbit leaf crumple virus Identified in Common Bean in Florida. Adkins S, et al. Plant Dis. 2009 Mar;93(3):320. doi: 10.1094/PDIS-93-3-0320B. PMID: 30764208 |
3 |
Waliullah S, et al. Int J Mol Sci. 2020 Mar 4;21(5):1756. doi: 10.3390/ijms21051756. PMID: 32143404 |
4 |
Detection of Cucurbit leaf crumple virus in Florida Cucurbits. Akad F, et al. Plant Dis. 2008 Apr;92(4):648. doi: 10.1094/PDIS-92-4-0648C. PMID: 30769620 |
5 |
Hagen C, et al. Plant Dis. 2008 May;92(5):781-793. doi: 10.1094/PDIS-92-5-0781. PMID: 30769582 |
6 |
Gadhave KR, et al. Phytopathology. 2020 Jun;110(6):1235-1241. doi: 10.1094/PHYTO-09-19-0337-R. Epub 2020 Apr 16. PMID: 32096698 |
7 |
Hagen C, et al. Phytopathology. 2008 Sep;98(9):1029-37. doi: 10.1094/PHYTO-98-9-1029. PMID: 18943741 |
8 |
Kuo YW, et al. Plant Dis. 2007 Mar;91(3):330. doi: 10.1094/PDIS-91-3-0330B. PMID: 30780592 |
9 |
Mondal S, et al. Plant Dis. 2021 May 19. doi: 10.1094/PDIS-01-21-0184-PDN. Online ahead of print. PMID: 34010021 |
10 |
Cucurbit yellow stunting disorder virus Detected in Pigweed in Florida. Webster CG, et al. Plant Dis. 2011 Mar;95(3):360. doi: 10.1094/PDIS-11-10-0813. PMID: 30743517 |