Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000857305.1 |
Isolate | India |
Release date | 2015/2/13 |
Submitter | Mandal,B., Pappu,H.R., Muniyappa,V. |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_694928.1 |
---|---|
Location | 145-501 |
Gene Name | AV2 |
Protein Name | pre-coat protein |
Coding Region | ATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGGTTTAGATGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATGCTCCTGACACATTGGGGCACGATTTAATTAGGGATTTAATTTCAGTAATTAGGGCCAGAAATTATGTCGAAGCGTCCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGTCGTCTCAACTTCGACAGCCCATATGTGAACCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAGGCATGGGCGAACAGACCTATGTACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTCCCTAA |
Protein Sequence | MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYAPDTLGHDLIRDLISVIRARNYVEASSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKGMGEQTYVQEAQDVQDVQKPRCP |
NCBI Accession | NP_694929.1 |
---|---|
Location | 290-613 |
Gene Name | AC5 |
Protein Name | AC5 protein |
Coding Region | ATGGGTCAGCCCAATACCCCTAGTAACATCAGAAAGACAAATAACCTTACCCATGTGACCAATATCATTCTTCGCATCAAAAGACTGCACCTTACATGGGCCTTCACATCCCTTAGGGACATCTGGGCTTCTGTACATCCTGTACATCCTGGGCTTCCTGTACATAGGTCTGTTCGCCCATGCCTTTGCTTTGGTGACGCGGACAATGGGGGCAGCAGCACGGTTCACATATGGGCTGTCGAAGTTGAGACGACGGCGTACCTTCGAAGCGGGCGTGGAAATGATTATATCTGCTGGACGCTTCGACATAATTTCTGGCCCTAA |
Protein Sequence | MGQPNTPSNIRKTNNLTHVTNIILRIKRLHLTWAFTSLRDIWASVHPVHPGLPVHRSVRPCLCFGDADNGGSSTVHIWAVEVETTAYLRSGRGNDYICWTLRHNFWP |
NCBI Accession | NP_694930.1 |
---|---|
Location | 305-1075 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGTCCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGTCGTCTCAACTTCGACAGCCCATATGTGAACCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAGGCATGGGCGAACAGACCTATGTACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTGCAGTCTTTTGATGCGAAGAATGATATTGGTCACATGGGTAAGGTTATTTGTCTTTCTGATGTTACTAGGGGTATTGGGCTGACCCATCGAGTAGGGAAACGTTTCTGTGTGAAGTCATTGTATTTTGTTGGCAAAATATGGATGGACGAGAACATCAAGACCAAGAACCATACGAATACTGTTATGTTTTGGATCGTTAGAGATAGGCGTCCTTCAGGAACCCCAAATGATTTCCAGCAAGTGTTCAATGTTTATGATAATGAGCCCTCTACGGCTACTGTGAAGAACGACCAGCGTGATCGTTTTCAGGTGTTGAGGAGGTTTCAAGCAACAGTCACAGGTGGTCAATATGCTGCTAAGGAACAAGCTATAATTAGGAAATTCTATCGTGTCAACAATTATGTGGTGTATAATCACCAGGAAGCTGGGAAGTATGAAAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACAAATTAA |
Protein Sequence | MSKRPADIIISTPASKVRRRLNFDSPYVNRAAAPIVRVTKAKAWANRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEPSTATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN |
NCBI Accession | NP_694931.1 |
---|---|
Location | 1078-1482 |
Gene Name | AC3 |
Protein Name | AC3 protein |
Coding Region | ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACACAACACCACAACAGGCCATTCCTAATGAAGGAAGACATCATCACCGTTCAGATACAGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTCCTAGCCTTCCGAATCTGGATGACCTCACAGCCTCCGACTGGTCGTTTCTTAAGGGTATTTAAGACCCAAGTTCTTAAGTATTTAAATAACTTAGGAGTTATCAGTATTAACACTGTACTTAAATCAGTTGATCATGTATTATGGAATGTATTACATCACGTTGTATATGTAGACCAATCATATTCAATAAAATTCAATCTTTATTAA |
Protein Sequence | MDSRTGELITAAQAENGVFIWEIQNPLYFKITQHHNRPFLMKEDIITVQIQFNHNLRKALGIHKCFLAFRIWMTSQPPTGRFLRVFKTQVLKYLNNLGVISINTVLKSVDHVLWNVLHHVVYVDQSYSIKFNLY |
NCBI Accession | NP_694932.1 |
---|---|
Location | 1223-1627 |
Gene Name | AC2 |
Protein Name | AC2 protein |
Coding Region | ATGCGACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAAGATAGCCAAGAAGGGGATCAGGCGTCGACGAGTTGATCTACCGTGTGGGTGTTCATACTTCATATCCATAGCCTGCCACAACCATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACACAACACCACAACAGGCCATTCCTAATGAAGGAAGACATCATCACCGTTCAGATACAGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTCCTAGCCTTCCGAATCTGGATGACCTCACAGCCTCCGACTGGTCGTTTCTTAAGGGTATTTAA |
Protein Sequence | MRPSSPSKAHSTQVPIKVQHKIAKKGIRRRRVDLPCGCSYFISIACHNHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNTTPQQAIPNEGRHHHRSDTVQSQPEESVGDTQMFPSLPNLDDLTASDWSFLKGI |
NCBI Accession | NP_694933.1 |
---|---|
Location | 1530-2615 |
Gene Name | AC1 |
Protein Name | replication-associated protein |
Coding Region | ATGCCTCGTATTAACTCTTTTTGTGTTAATGCCAAAAATATCTTCCTTACTTATCCCAAATGCCCAATACCCAAAGAACAAATGCTCGAAATCCTTAAAAACATTTCCTGTCCGTCTAATAGATTATTTATCAGAGTAGCCCAAGAGAAACACCAAGATGGGTCTATGCATATCCATGCCCTCATCCAATTCAAAGGTAAATCCAAGTTCCGAAACCCCAGACATTTCGATGTCACTCACCCTAATAGCTCCACCCAATTCCATCCAAACTTCCAGGGAGCTAAGTCCAGCTCCGATGTCAAGTCCTACATCGAGAAGGACAGTGATTACATCGACTGGGGTGAGTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCTTAAATGCAGGTTCAACCGAAGCAGCTTTAGCAATAATTAGGGAAAAACTCCCTAAAGATTTTATTTTTCAATATCATAATTTAAAATGTAATTTAGATAGGATTTTTACACCTCCAATGGAGGTTTATGTTTCTCCTTTTTCTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAGGAGTGGGCTGCCGAGAACGTCGTCAGTGCCGCTGCGCGGCCTATAAGGCCCATAAGTATAGTGATCGAGGGTGACAGTAGAACTGGGAAGACGATGTGGGCCAGATCACTTGGACCACATAATTATCTGTGTGGTCATCTAGACCTTAGCCCAAAAGTCTACAGTAATGATGCCTGGTATAACGTAATTGATGACGTAGACCCCCACTACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAAGGACTGGCAATCAAATACAAAATACGGGAAGCCAGTTCAAATTAAAGGCGGAATTCCCACAATCTTCCTCTGCAATCCAGGACCTGACTCAAGTTATAAAGAGTTCTTGGATGAAGAGAAAAATGCTGCACTCAAGAATTGGGCTTTAAAGAATGCGACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAAGATAGCCAAGAAGGGGATCAGGCGTCGACGAGTTGA |
Protein Sequence | MPRINSFCVNAKNIFLTYPKCPIPKEQMLEILKNISCPSNRLFIRVAQEKHQDGSMHIHALIQFKGKSKFRNPRHFDVTHPNSSTQFHPNFQGAKSSSDVKSYIEKDSDYIDWGEFQIDGRSARGGQQTANDAAAEALNAGSTEAALAIIREKLPKDFIFQYHNLKCNLDRIFTPPMEVYVSPFSSSSFDQVPEELEEWAAENVVSAAARPIRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQKDWQSNTKYGKPVQIKGGIPTIFLCNPGPDSSYKEFLDEEKNAALKNWALKNATFITLEGPLYSGSNQSAAQDSQEGDQASTS |
NCBI Accession | NP_694934.1 |
---|---|
Location | 2201-2458 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGGTCTATGCATATCCATGCCCTCATCCAATTCAAAGGTAAATCCAAGTTCCGAAACCCCAGACATTTCGATGTCACTCACCCTAATAGCTCCACCCAATTCCATCCAAACTTCCAGGGAGCTAAGTCCAGCTCCGATGTCAAGTCCTACATCGAGAAGGACAGTGATTACATCGACTGGGGTGAGTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCTTAA |
Protein Sequence | MGLCISMPSSNSKVNPSSETPDISMSLTLIAPPNSIQTSRELSPAPMSSPTSRRTVITSTGVSFRSMEDLHEEVNRQLMMLQQRP |
1 |
Kumar A, et al. Virus Res. 2018 Jan 2;243:60-64. doi: 10.1016/j.virusres.2017.10.005. Epub 2017 Oct 12. PMID: 29031475 |
---|---|
2 |
Zhai Y, et al. Front Plant Sci. 2022 Jan 7;12:768800. doi: 10.3389/fpls.2021.768800. eCollection 2021. PMID: 35069624 |
3 |
A new variant of Croton yellow vein mosaic virus naturally infecting wild sunflower in India. Sharma R, et al. Virusdisease. 2018 Dec;29(4):513-519. doi: 10.1007/s13337-018-0495-8. Epub 2018 Nov 15. PMID: 30539055 |
4 |
Pramesh D, et al. Arch Virol. 2013 Mar;158(3):531-42. doi: 10.1007/s00705-012-1511-8. Epub 2012 Oct 25. PMID: 23096697 |
5 |
Snehi SK, et al. Virus Genes. 2011 Aug;43(1):93-101. doi: 10.1007/s11262-011-0605-9. Epub 2011 Apr 9. PMID: 21479677 |
6 |
Jailani AAK, et al. Virusdisease. 2016 Sep;27(3):277-286. doi: 10.1007/s13337-016-0326-8. Epub 2016 Jul 4. PMID: 28466040 |
7 |
Sahu AK, et al. Mol Biol Rep. 2014 Nov;41(11):7631-8. doi: 10.1007/s11033-014-3653-0. Epub 2014 Aug 3. PMID: 25086625 |
8 |
Sinha V, et al. Virus Genes. 2017 Dec;53(6):906-912. doi: 10.1007/s11262-017-1499-y. Epub 2017 Jul 31. PMID: 28762207 |
9 |
Association of a satellite DNA beta molecule with mesta yellow vein mosaic disease. Chatterjee A, et al. Virus Genes. 2007 Dec;35(3):835-44. doi: 10.1007/s11262-007-0160-6. Epub 2007 Aug 31. PMID: 17763932 |
10 |
Gireeshbai S, et al. Lett Appl Microbiol. 2022 Oct;75(4):1000-1009. doi: 10.1111/lam.13774. Epub 2022 Jul 2. PMID: 35723883 |