Croton yellow vein mosaic virus

Basic Information

Genus Begomovirus
NCBI Assembly GCF_000857305.1
Isolate India
Release date 2015/2/13
Submitter Mandal,B., Pappu,H.R., Muniyappa,V.
Host
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

NC_004300
ACCGGATGGCCGCGAAAAAAAAAAGTGGGCCCCATGGCGCACTAACTGACAAATACATCTCCACCAATGAAAAGAGCTCCTCAGAGCTTAATTGTTTTGTGGTCCCCTATTTAAACTTCGCCACCAAGTAGTGCATTGCGCACTATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGGTTTAGATGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATGCTCCTGACACATTGGGGCACGATTTAATTAGGGATTTAATTTCAGTAATTAGGGCCAGAAATTATGTCGAAGCGTCCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGTCGTCTCAACTTCGACAGCCCATATGTGAACCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAGGCATGGGCGAACAGACCTATGTACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTGCAGTCTTTTGATGCGAAGAATGATATTGGTCACATGGGTAAGGTTATTTGTCTTTCTGATGTTACTAGGGGTATTGGGCTGACCCATCGAGTAGGGAAACGTTTCTGTGTGAAGTCATTGTATTTTGTTGGCAAAATATGGATGGACGAGAACATCAAGACCAAGAACCATACGAATACTGTTATGTTTTGGATCGTTAGAGATAGGCGTCCTTCAGGAACCCCAAATGATTTCCAGCAAGTGTTCAATGTTTATGATAATGAGCCCTCTACGGCTACTGTGAAGAACGACCAGCGTGATCGTTTTCAGGTGTTGAGGAGGTTTCAAGCAACAGTCACAGGTGGTCAATATGCTGCTAAGGAACAAGCTATAATTAGGAAATTCTATCGTGTCAACAATTATGTGGTGTATAATCACCAGGAAGCTGGGAAGTATGAAAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACAAATTAACATTAATAAAGATTGAATTTTATTGAATATGATTGGTCTACATATACAACGTGATGTAATACATTCCATAATACATGATCAACTGATTTAAGTACAGTGTTAATACTGATAACTCCTAAGTTATTTAAATACTTAAGAACTTGGGTCTTAAATACCCTTAAGAAACGACCAGTCGGAGGCTGTGAGGTCATCCAGATTCGGAAGGCTAGGAAACATTTGTGTATCCCCAACGCTTTCCTCAGGTTGTGATTGAACTGTATCTGAACGGTGATGATGTCTTCCTTCATTAGGAATGGCCTGTTGTGGTGTTGTGTTATCTTGAAATACAGGGGATTTTGAATCTCCCAGATAAACACGCCATTCTCTGCTTGAGCTGCAGTGATGAGTTCCCCTGTGCGTGAATCCATGGTTGTGGCAGGCTATGGATATGAAGTATGAACACCCACACGGTAGATCAACTCGTCGACGCCTGATCCCCTTCTTGGCTATCTTGTGCTGCACTTTGATTGGAACCTGAGTAGAGTGGGCCTTCGAGGGTGATGAAGGTCGCATTCTTTAAAGCCCAATTCTTGAGTGCAGCATTTTTCTCTTCATCCAAGAACTCTTTATAACTTGAGTCAGGTCCTGGATTGCAGAGGAAGATTGTGGGAATTCCGCCTTTAATTTGAACTGGCTTCCCGTATTTTGTATTTGATTGCCAGTCCTTTTGGGCCCCCATGAATTCCTTAAAGTGCTTTAGGTAGTGGGGGTCTACGTCATCAATTACGTTATACCAGGCATCATTACTGTAGACTTTTGGGCTAAGGTCTAGATGACCACACAGATAATTATGTGGTCCAAGTGATCTGGCCCACATCGTCTTCCCAGTTCTACTGTCACCCTCGATCACTATACTTATGGGCCTTATAGGCCGCGCAGCGGCACTGACGACGTTCTCGGCAGCCCACTCCTCAAGTTCTTCTGGAACTTGATCGAATGAAGAAGAAGAAAAAGGAGAAACATAAACCTCCATTGGAGGTGTAAAAATCCTATCTAAATTACATTTTAAATTATGATATTGAAAAATAAAATCTTTAGGGAGTTTTTCCCTAATTATTGCTAAAGCTGCTTCGGTTGAACCTGCATTTAAGGCCTCTGCTGCAGCATCATTAGCTGTCTGTTGACCTCCTCGTGCAGATCTTCCATCGATCTGAAACTCACCCCAGTCGATGTAATCACTGTCCTTCTCGATGTAGGACTTGACATCGGAGCTGGACTTAGCTCCCTGGAAGTTTGGATGGAATTGGGTGGAGCTATTAGGGTGAGTGACATCGAAATGTCTGGGGTTTCGGAACTTGGATTTACCTTTGAATTGGATGAGGGCATGGATATGCATAGACCCATCTTGGTGTTTCTCTTGGGCTACTCTGATAAATAATCTATTAGACGGACAGGAAATGTTTTTAAGGATTTCGAGCATTTGTTCTTTGGGTATTGGGCATTTGGGATAAGTAAGGAAGATATTTTTGGCATTAACACAAAAAGAGTTAATACGAGGCATATTGAATTGGGGACACTCAAAACTCTGAGGAATGGGGGACTCGGGGGACTCATTTATATGGTGTCCCTAAATGGCATTTCTGTAATTTGGTAAAGTAATTCAAAATTCTCACGCTCCAAAAAGCGGCCATCCGTATAATATT

Gene Information

NCBI Accession NP_694928.1
Location 145-501
Gene Name AV2
Protein Name pre-coat protein
Coding Region ATGTGGGATCCATTAGTAAACGAGTTTCCCGAAACCGTTCACGGGTTTAGATGTATGTTAGCAGTTAAATATCTGCAGTTAGTAGAGAAGACTTATGCTCCTGACACATTGGGGCACGATTTAATTAGGGATTTAATTTCAGTAATTAGGGCCAGAAATTATGTCGAAGCGTCCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGTCGTCTCAACTTCGACAGCCCATATGTGAACCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAGGCATGGGCGAACAGACCTATGTACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTCCCTAA
Protein Sequence MWDPLVNEFPETVHGFRCMLAVKYLQLVEKTYAPDTLGHDLIRDLISVIRARNYVEASSRYNHFHARFEGTPSSQLRQPICEPCCCPHCPRHQSKGMGEQTYVQEAQDVQDVQKPRCP

NCBI Accession NP_694929.1
Location 290-613
Gene Name AC5
Protein Name AC5 protein
Coding Region ATGGGTCAGCCCAATACCCCTAGTAACATCAGAAAGACAAATAACCTTACCCATGTGACCAATATCATTCTTCGCATCAAAAGACTGCACCTTACATGGGCCTTCACATCCCTTAGGGACATCTGGGCTTCTGTACATCCTGTACATCCTGGGCTTCCTGTACATAGGTCTGTTCGCCCATGCCTTTGCTTTGGTGACGCGGACAATGGGGGCAGCAGCACGGTTCACATATGGGCTGTCGAAGTTGAGACGACGGCGTACCTTCGAAGCGGGCGTGGAAATGATTATATCTGCTGGACGCTTCGACATAATTTCTGGCCCTAA
Protein Sequence MGQPNTPSNIRKTNNLTHVTNIILRIKRLHLTWAFTSLRDIWASVHPVHPGLPVHRSVRPCLCFGDADNGGSSTVHIWAVEVETTAYLRSGRGNDYICWTLRHNFWP

NCBI Accession NP_694930.1
Location 305-1075
Gene Name AV1
Protein Name coat protein
Coding Region ATGTCGAAGCGTCCAGCAGATATAATCATTTCCACGCCCGCTTCGAAGGTACGCCGTCGTCTCAACTTCGACAGCCCATATGTGAACCGTGCTGCTGCCCCCATTGTCCGCGTCACCAAAGCAAAGGCATGGGCGAACAGACCTATGTACAGGAAGCCCAGGATGTACAGGATGTACAGAAGCCCAGATGTCCCTAAGGGATGTGAAGGCCCATGTAAGGTGCAGTCTTTTGATGCGAAGAATGATATTGGTCACATGGGTAAGGTTATTTGTCTTTCTGATGTTACTAGGGGTATTGGGCTGACCCATCGAGTAGGGAAACGTTTCTGTGTGAAGTCATTGTATTTTGTTGGCAAAATATGGATGGACGAGAACATCAAGACCAAGAACCATACGAATACTGTTATGTTTTGGATCGTTAGAGATAGGCGTCCTTCAGGAACCCCAAATGATTTCCAGCAAGTGTTCAATGTTTATGATAATGAGCCCTCTACGGCTACTGTGAAGAACGACCAGCGTGATCGTTTTCAGGTGTTGAGGAGGTTTCAAGCAACAGTCACAGGTGGTCAATATGCTGCTAAGGAACAAGCTATAATTAGGAAATTCTATCGTGTCAACAATTATGTGGTGTATAATCACCAGGAAGCTGGGAAGTATGAAAATCACACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCCTCTAATCCTGTGTATGCTACTTTGAAAGTTAGGAGTTACTTCTACGATTCTGTAACAAATTAA
Protein Sequence MSKRPADIIISTPASKVRRRLNFDSPYVNRAAAPIVRVTKAKAWANRPMYRKPRMYRMYRSPDVPKGCEGPCKVQSFDAKNDIGHMGKVICLSDVTRGIGLTHRVGKRFCVKSLYFVGKIWMDENIKTKNHTNTVMFWIVRDRRPSGTPNDFQQVFNVYDNEPSTATVKNDQRDRFQVLRRFQATVTGGQYAAKEQAIIRKFYRVNNYVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKVRSYFYDSVTN

NCBI Accession NP_694931.1
Location 1078-1482
Gene Name AC3
Protein Name AC3 protein
Coding Region ATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACACAACACCACAACAGGCCATTCCTAATGAAGGAAGACATCATCACCGTTCAGATACAGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTCCTAGCCTTCCGAATCTGGATGACCTCACAGCCTCCGACTGGTCGTTTCTTAAGGGTATTTAAGACCCAAGTTCTTAAGTATTTAAATAACTTAGGAGTTATCAGTATTAACACTGTACTTAAATCAGTTGATCATGTATTATGGAATGTATTACATCACGTTGTATATGTAGACCAATCATATTCAATAAAATTCAATCTTTATTAA
Protein Sequence MDSRTGELITAAQAENGVFIWEIQNPLYFKITQHHNRPFLMKEDIITVQIQFNHNLRKALGIHKCFLAFRIWMTSQPPTGRFLRVFKTQVLKYLNNLGVISINTVLKSVDHVLWNVLHHVVYVDQSYSIKFNLY

NCBI Accession NP_694932.1
Location 1223-1627
Gene Name AC2
Protein Name AC2 protein
Coding Region ATGCGACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAAGATAGCCAAGAAGGGGATCAGGCGTCGACGAGTTGATCTACCGTGTGGGTGTTCATACTTCATATCCATAGCCTGCCACAACCATGGATTCACGCACAGGGGAACTCATCACTGCAGCTCAAGCAGAGAATGGCGTGTTTATCTGGGAGATTCAAAATCCCCTGTATTTCAAGATAACACAACACCACAACAGGCCATTCCTAATGAAGGAAGACATCATCACCGTTCAGATACAGTTCAATCACAACCTGAGGAAAGCGTTGGGGATACACAAATGTTTCCTAGCCTTCCGAATCTGGATGACCTCACAGCCTCCGACTGGTCGTTTCTTAAGGGTATTTAA
Protein Sequence MRPSSPSKAHSTQVPIKVQHKIAKKGIRRRRVDLPCGCSYFISIACHNHGFTHRGTHHCSSSREWRVYLGDSKSPVFQDNTTPQQAIPNEGRHHHRSDTVQSQPEESVGDTQMFPSLPNLDDLTASDWSFLKGI

NCBI Accession NP_694933.1
Location 1530-2615
Gene Name AC1
Protein Name replication-associated protein
Coding Region ATGCCTCGTATTAACTCTTTTTGTGTTAATGCCAAAAATATCTTCCTTACTTATCCCAAATGCCCAATACCCAAAGAACAAATGCTCGAAATCCTTAAAAACATTTCCTGTCCGTCTAATAGATTATTTATCAGAGTAGCCCAAGAGAAACACCAAGATGGGTCTATGCATATCCATGCCCTCATCCAATTCAAAGGTAAATCCAAGTTCCGAAACCCCAGACATTTCGATGTCACTCACCCTAATAGCTCCACCCAATTCCATCCAAACTTCCAGGGAGCTAAGTCCAGCTCCGATGTCAAGTCCTACATCGAGAAGGACAGTGATTACATCGACTGGGGTGAGTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCTTAAATGCAGGTTCAACCGAAGCAGCTTTAGCAATAATTAGGGAAAAACTCCCTAAAGATTTTATTTTTCAATATCATAATTTAAAATGTAATTTAGATAGGATTTTTACACCTCCAATGGAGGTTTATGTTTCTCCTTTTTCTTCTTCTTCATTCGATCAAGTTCCAGAAGAACTTGAGGAGTGGGCTGCCGAGAACGTCGTCAGTGCCGCTGCGCGGCCTATAAGGCCCATAAGTATAGTGATCGAGGGTGACAGTAGAACTGGGAAGACGATGTGGGCCAGATCACTTGGACCACATAATTATCTGTGTGGTCATCTAGACCTTAGCCCAAAAGTCTACAGTAATGATGCCTGGTATAACGTAATTGATGACGTAGACCCCCACTACCTAAAGCACTTTAAGGAATTCATGGGGGCCCAAAAGGACTGGCAATCAAATACAAAATACGGGAAGCCAGTTCAAATTAAAGGCGGAATTCCCACAATCTTCCTCTGCAATCCAGGACCTGACTCAAGTTATAAAGAGTTCTTGGATGAAGAGAAAAATGCTGCACTCAAGAATTGGGCTTTAAAGAATGCGACCTTCATCACCCTCGAAGGCCCACTCTACTCAGGTTCCAATCAAAGTGCAGCACAAGATAGCCAAGAAGGGGATCAGGCGTCGACGAGTTGA
Protein Sequence MPRINSFCVNAKNIFLTYPKCPIPKEQMLEILKNISCPSNRLFIRVAQEKHQDGSMHIHALIQFKGKSKFRNPRHFDVTHPNSSTQFHPNFQGAKSSSDVKSYIEKDSDYIDWGEFQIDGRSARGGQQTANDAAAEALNAGSTEAALAIIREKLPKDFIFQYHNLKCNLDRIFTPPMEVYVSPFSSSSFDQVPEELEEWAAENVVSAAARPIRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQKDWQSNTKYGKPVQIKGGIPTIFLCNPGPDSSYKEFLDEEKNAALKNWALKNATFITLEGPLYSGSNQSAAQDSQEGDQASTS

NCBI Accession NP_694934.1
Location 2201-2458
Gene Name AC4
Protein Name AC4 protein
Coding Region ATGGGTCTATGCATATCCATGCCCTCATCCAATTCAAAGGTAAATCCAAGTTCCGAAACCCCAGACATTTCGATGTCACTCACCCTAATAGCTCCACCCAATTCCATCCAAACTTCCAGGGAGCTAAGTCCAGCTCCGATGTCAAGTCCTACATCGAGAAGGACAGTGATTACATCGACTGGGGTGAGTTTCAGATCGATGGAAGATCTGCACGAGGAGGTCAACAGACAGCTAATGATGCTGCAGCAGAGGCCTTAA
Protein Sequence MGLCISMPSSNSKVNPSSETPDISMSLTLIAPPNSIQTSRELSPAPMSSPTSRRTVITSTGVSFRSMEDLHEEVNRQLMMLQQRP

References More References in PubMed

1

Natural infection of croton yellow vein mosaic virus and its cognate betasatellite in germplasm of different Crambe spp in India.

Kumar A, et al.  Virus Res. 2018 Jan 2;243:60-64. doi: 10.1016/j.virusres.2017.10.005. Epub 2017 Oct 12.

PMID: 29031475
2

Identification and Functional Analysis of Four RNA Silencing Suppressors in Begomovirus Croton Yellow Vein Mosaic Virus.

Zhai Y, et al.  Front Plant Sci. 2022 Jan 7;12:768800. doi: 10.3389/fpls.2021.768800. eCollection 2021.

PMID: 35069624
3

A new variant of Croton yellow vein mosaic virus naturally infecting wild sunflower in India.

Sharma R, et al.  Virusdisease. 2018 Dec;29(4):513-519. doi: 10.1007/s13337-018-0495-8. Epub 2018 Nov 15.

PMID: 30539055
4

Host range and genetic diversity of croton yellow vein mosaic virus, a weed-infecting monopartite begomovirus causing leaf curl disease in tomato.

Pramesh D, et al.  Arch Virol. 2013 Mar;158(3):531-42. doi: 10.1007/s00705-012-1511-8. Epub 2012 Oct 25.

PMID: 23096697
5

Complete nucleotide sequence of Croton yellow vein mosaic virus and DNA-β associated with yellow vein mosaic disease of Jatropha gossypifolia in India.

Snehi SK, et al.  Virus Genes. 2011 Aug;43(1):93-101. doi: 10.1007/s11262-011-0605-9. Epub 2011 Apr 9.

PMID: 21479677
6

Agroinfection of tobacco by croton yellow vein mosaic virus and designing of a replicon vector for expression of foreign gene in plant.

Jailani AAK, et al.  Virusdisease. 2016 Sep;27(3):277-286. doi: 10.1007/s13337-016-0326-8. Epub 2016 Jul 4.

PMID: 28466040
7

RNAi mediated gene silencing against betasatellite associated with Croton yellow vein mosaic begomovirus.

Sahu AK, et al.  Mol Biol Rep. 2014 Nov;41(11):7631-8. doi: 10.1007/s11033-014-3653-0. Epub 2014 Aug 3.

PMID: 25086625
8

The efficacy of antisense-based construct for inducing resistance against Croton yellow vein mosaic virus in Nicotiana tabacum.

Sinha V, et al.  Virus Genes. 2017 Dec;53(6):906-912. doi: 10.1007/s11262-017-1499-y. Epub 2017 Jul 31.

PMID: 28762207
9

Association of a satellite DNA beta molecule with mesta yellow vein mosaic disease.

Chatterjee A, et al.  Virus Genes. 2007 Dec;35(3):835-44. doi: 10.1007/s11262-007-0160-6. Epub 2007 Aug 31.

PMID: 17763932
10

Mixed infection of a new begomovirus, Jatropha leaf curl Guntur virus and recombinant/chimeric jatropha leaf curl Gujarat virus in Jatropha gossypiifolia.

Gireeshbai S, et al.  Lett Appl Microbiol. 2022 Oct;75(4):1000-1009. doi: 10.1111/lam.13774. Epub 2022 Jul 2.

PMID: 35723883