Cowpea golden mosaic virus

Basic Information

Genus Begomovirus
Isolate Nigeria
Vector
Download Genome |GFF3 |PEP |CDS

Genomic Organization

JBrowse

Genome

AF029217
ACCTGAGGGCCGCTTTCGGTGTACCCCACGCACCAATCAGGATGCGCCATTTGCGCTTATTTATTAACTGGGCCTCTATATATTGGGCTTTGTTGTGTATTGGATTTGCACCATGTTTAACCCACTAACTGAACCCCTCCCAGTTACTCCTCACGGTTTGATGTGTATGTTGGCTTTGAAATATTTGCAGGAGTTCGAGAAATCTGTACATTTGACTCCGTGTGATAATACTGAGTTGTTGTTACTCCGCCGTGTTATTCGTGCAAGGACTTACGATGAAGCGAAGCGCCGATACCATATATTCCACACCTTCCAAGGCTCGAAGGAGGTTGACGTTCGACACCCCTCGTGCGACTCCTGCGTCCTTAGGGCGTTCCAACAAAAGGCGGGCTTGGGAGAACCGGCCCATGAACCGCAAGCCCATGATGTACCGGCTTTGGAGGAGTCCTGATGTTCCGTATGGTTGTGAGGGTCCATGTAAGGTTCAGTCTTTCGAGGCCAGACACGACGTCAAACACACGGGAACTTTTCAGTGTTGTTCAGACGTTACTCGGGGAATGGGTTTGACTCATCGCGTTGGGAAGCGTTTCACCATAAAGACTATCGGTATCTGGGGCAAGATCTGGATGGATGATAACATCAAGTTGAAGAACCACACTAACATAGTCATCTTTTTCTTAGTGCGTGACCGGCGTCCTAGTGGAGAACCAGTTTCTTTTGGAAGTTTGTTTAATATGTTCGATAACGAGCCAACTACGGCCACTGTGAAGCAAGAATATCGTGATCGTTTTCAGGTTATGAGGAGGTTTCATGCATCTGTTACCGGTGGACAGTACGCTTCAAAGGAACAGGCGTTGGTTAAGCGTTTTTTCAGGAACATTAATCATCGAGTTGTTTACAACCAACAAGAAGGCGCAGAGTACAAGAATCATCATGAAAATGCTTTGATGTTGTATATGGCATGTAGTCATGCCTCTAATCCTGTGTACGCGACAATTAAAGTTCGCATTTATTTTTACGACTCCATTACGAATTAATAAAGATTGAATATTATTTCATATTTTGGGTCTACATCAATTGTTCCATGAATTACATCAAACAACACATGATCGCACGCTAAAATACATGTATTAATTGAAATGACACCTAATCTATCTAAATAACGCATAACTTGTGTTTTAAAGACTCTCAAGAAACGCCAGGTCTGACTCCGTAAGACTGTTGAGATAGTCAATGTCATCCAGCATTTGTGAATCCCCAAGGCTTTCCTGAGGTTGTGGTTGAACTGGAGTCGAATTACTATTTCGTGGAACGGTAATCCCATTACCCATTCGTGGTGGCTCATCACCTTGAAATATATTGCATTTGGGACTGTCCAGATATAGGCGCCATTCTGCGCTTGAGCTGCAGTGATGGACTCCCCTGTGCGTAAATCCATGGTTGGCACACTCTATTGCGAGGTAGTATGAACAACCACAGGTTAAATCAACTCGTCGGCGCCTGATCTGTTTCTTTTTAGCTATTCTGTGTCTGACTTTTATTGGAATTTGAGTAGAGCGGGAAGGAGATGTCGACGAAGATTGCATTCTTTAATGCCCACTGCTTTAAATCTTTATTTTTATCTTCATCCAAGAAGCTTTTATAGGAGCTATTTGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCTCCTTTAATTTGAATTGGTTTCCCGTACTTTGTGTTGCTTTGCCAATCGTGCTGGGCACCCATGAATTCTTTAAAGTGCTTTAGATAGTGCGGATCGACGTCATCGATGACGTTATACCAGGCATTATTGCTATACACTTTTGGACTTAGGTCCAGATGACCGCATAGGTAATTGTGCGCACCTAATGATCTGGCCCACATTGTTTTCCCTGTTCTTGACTCCCCTTCAATGACTATGCTAATCGGTCTATCCGGCCGCGCAGCGGCATCCACCACGTTGATTGACGCCCAATCTTTCATGATCTGAGGAACGTTATTGAATGAGTTTAACCTAAACGGACAAGAATAGGGCTCTAATGGCTTACTGAAAATGCGATCTAAGTTGCTTTTAATGTTGTGGTAATGTAAGACGAAGTCCTTCGGAGCAAGTTCTTTCACAATGTTGAGAGCCTTCGTCGGACTTCCAGAGTTAATTGCTGCGGCGTAAGCGTCGTTGGCTGATTGTTGTCCTCCTCGGCTAGATCTTCCATCGATCTGGAATTCGCCCCATGAGATGGTGTCTCCATCCTTCTCGATATAGGACTTGACGTCGGAGCTCGATTTTGCTCCCTGAATGTTTGGATGAAACACGGCAGATCTGTTTCCAGAGACAAGGTCGAACAGTCTTGGATTTGTGATCTGGAGCTTACCTTCGAATTGTAGCAGTACGTGCAGATGAGGTTCCCCATCTTCGTGTAATTCCCTTGCTACCTTGATGAATTTCTTATTGACGGCTGTTGGTATCTGCCGGAGAAGCTCTAGGGCTTCCTCTTTCGGAAGAGAGCATCTGGGATAAGTGGCGAAAATGTTTTTGGCATTCACTCTAAACGCTCCGCTGCGTGGCATATTTGCAATTCTTGCGTTTACACCGATTGCTCTCAAAATCTTTTATCGCATATATTGGTGTAACGGGGTACCTAATATACTATATACCCCAATACACCTGGTAGTGACATCTGTCCCTAGTCCCCACACCTTTAGCGGCCCTCAGTATAATATT

Gene Information

NCBI Accession AAB87605.1
Location 113-451
Gene Name v2
Protein Name precoat protein
Coding Region ATGTTTAACCCACTAACTGAACCCCTCCCAGTTACTCCTCACGGTTTGATGTGTATGTTGGCTTTGAAATATTTGCAGGAGTTCGAGAAATCTGTACATTTGACTCCGTGTGATAATACTGAGTTGTTGTTACTCCGCCGTGTTATTCGTGCAAGGACTTACGATGAAGCGAAGCGCCGATACCATATATTCCACACCTTCCAAGGCTCGAAGGAGGTTGACGTTCGACACCCCTCGTGCGACTCCTGCGTCCTTAGGGCGTTCCAACAAAAGGCGGGCTTGGGAGAACCGGCCCATGAACCGCAAGCCCATGATGTACCGGCTTTGGAGGAGTCCTGA
Protein Sequence MFNPLTEPLPVTPHGLMCMLALKYLQEFEKSVHLTPCDNTELLLLRRVIRARTYDEAKRRYHIFHTFQGSKEVDVRHPSCDSCVLRAFQQKAGLGEPAHEPQAHDVPALEES

NCBI Accession AAB87606.1
Location 276-1037
Gene Name cp
Protein Name coat protein
Coding Region ATGAAGCGAAGCGCCGATACCATATATTCCACACCTTCCAAGGCTCGAAGGAGGTTGACGTTCGACACCCCTCGTGCGACTCCTGCGTCCTTAGGGCGTTCCAACAAAAGGCGGGCTTGGGAGAACCGGCCCATGAACCGCAAGCCCATGATGTACCGGCTTTGGAGGAGTCCTGATGTTCCGTATGGTTGTGAGGGTCCATGTAAGGTTCAGTCTTTCGAGGCCAGACACGACGTCAAACACACGGGAACTTTTCAGTGTTGTTCAGACGTTACTCGGGGAATGGGTTTGACTCATCGCGTTGGGAAGCGTTTCACCATAAAGACTATCGGTATCTGGGGCAAGATCTGGATGGATGATAACATCAAGTTGAAGAACCACACTAACATAGTCATCTTTTTCTTAGTGCGTGACCGGCGTCCTAGTGGAGAACCAGTTTCTTTTGGAAGTTTGTTTAATATGTTCGATAACGAGCCAACTACGGCCACTGTGAAGCAAGAATATCGTGATCGTTTTCAGGTTATGAGGAGGTTTCATGCATCTGTTACCGGTGGACAGTACGCTTCAAAGGAACAGGCGTTGGTTAAGCGTTTTTTCAGGAACATTAATCATCGAGTTGTTTACAACCAACAAGAAGGCGCAGAGTACAAGAATCATCATGAAAATGCTTTGATGTTGTATATGGCATGTAGTCATGCCTCTAATCCTGTGTACGCGACAATTAAAGTTCGCATTTATTTTTACGACTCCATTACGAATTAA
Protein Sequence MKRSADTIYSTPSKARRRLTFDTPRATPASLGRSNKRRAWENRPMNRKPMMYRLWRSPDVPYGCEGPCKVQSFEARHDVKHTGTFQCCSDVTRGMGLTHRVGKRFTIKTIGIWGKIWMDDNIKLKNHTNIVIFFLVRDRRPSGEPVSFGSLFNMFDNEPTTATVKQEYRDRFQVMRRFHASVTGGQYASKEQALVKRFFRNINHRVVYNQQEGAEYKNHHENALMLYMACSHASNPVYATIKVRIYFYDSITN

NCBI Accession AAB87609.1
Location 1034-1438
Gene Name c3
Protein Name c3 protein
Coding Region ATGGATTTACGCACAGGGGAGTCCATCACTGCAGCTCAAGCGCAGAATGGCGCCTATATCTGGACAGTCCCAAATGCAATATATTTCAAGGTGATGAGCCACCACGAATGGGTAATGGGATTACCGTTCCACGAAATAGTAATTCGACTCCAGTTCAACCACAACCTCAGGAAAGCCTTGGGGATTCACAAATGCTGGATGACATTGACTATCTCAACAGTCTTACGGAGTCAGACCTGGCGTTTCTTGAGAGTCTTTAAAACACAAGTTATGCGTTATTTAGATAGATTAGGTGTCATTTCAATTAATACATGTATTTTAGCGTGCGATCATGTGTTGTTTGATGTAATTCATGGAACAATTGATGTAGACCCAAAATATGAAATAATATTCAATCTTTATTAA
Protein Sequence MDLRTGESITAAQAQNGAYIWTVPNAIYFKVMSHHEWVMGLPFHEIVIRLQFNHNLRKALGIHKCWMTLTISTVLRSQTWRFLRVFKTQVMRYLDRLGVISINTCILACDHVLFDVIHGTIDVDPKYEIIFNLY

NCBI Accession AAB87608.1
Location 1179-1586
Gene Name trap
Protein Name transcription activation protein
Coding Region ATGCAATCTTCGTCGACATCTCCTTCCCGCTCTACTCAAATTCCAATAAAAGTCAGACACAGAATAGCTAAAAAGAAACAGATCAGGCGCCGACGAGTTGATTTAACCTGTGGTTGTTCATACTACCTCGCAATAGAGTGTGCCAACCATGGATTTACGCACAGGGGAGTCCATCACTGCAGCTCAAGCGCAGAATGGCGCCTATATCTGGACAGTCCCAAATGCAATATATTTCAAGGTGATGAGCCACCACGAATGGGTAATGGGATTACCGTTCCACGAAATAGTAATTCGACTCCAGTTCAACCACAACCTCAGGAAAGCCTTGGGGATTCACAAATGCTGGATGACATTGACTATCTCAACAGTCTTACGGAGTCAGACCTGGCGTTTCTTGAGAGTCTTTAA
Protein Sequence MQSSSTSPSRSTQIPIKVRHRIAKKKQIRRRRVDLTCGCSYYLAIECANHGFTHRGVHHCSSSAEWRLYLDSPKCNIFQGDEPPRMGNGITVPRNSNSTPVQPQPQESLGDSQMLDDIDYLNSLTESDLAFLESL

NCBI Accession AAB87607.1
Location 1516-2574
Gene Name rep
Protein Name replication-associated protein
Coding Region ATGCCACGCAGCGGAGCGTTTAGAGTGAATGCCAAAAACATTTTCGCCACTTATCCCAGATGCTCTCTTCCGAAAGAGGAAGCCCTAGAGCTTCTCCGGCAGATACCAACAGCCGTCAATAAGAAATTCATCAAGGTAGCAAGGGAATTACACGAAGATGGGGAACCTCATCTGCACGTACTGCTACAATTCGAAGGTAAGCTCCAGATCACAAATCCAAGACTGTTCGACCTTGTCTCTGGAAACAGATCTGCCGTGTTTCATCCAAACATTCAGGGAGCAAAATCGAGCTCCGACGTCAAGTCCTATATCGAGAAGGATGGAGACACCATCTCATGGGGCGAATTCCAGATCGATGGAAGATCTAGCCGAGGAGGACAACAATCAGCCAACGACGCTTACGCCGCAGCAATTAACTCTGGAAGTCCGACGAAGGCTCTCAACATTGTGAAAGAACTTGCTCCGAAGGACTTCGTCTTACATTACCACAACATTAAAAGCAACTTAGATCGCATTTTCAGTAAGCCATTAGAGCCCTATTCTTGTCCGTTTAGGTTAAACTCATTCAATAACGTTCCTCAGATCATGAAAGATTGGGCGTCAATCAACGTGGTGGATGCCGCTGCGCGGCCGGATAGACCGATTAGCATAGTCATTGAAGGGGAGTCAAGAACAGGGAAAACAATGTGGGCCAGATCATTAGGTGCGCACAATTACCTATGCGGTCATCTGGACCTAAGTCCAAAAGTGTATAGCAATAATGCCTGGTATAACGTCATCGATGACGTCGATCCGCACTATCTAAAGCACTTTAAAGAATTCATGGGTGCCCAGCACGATTGGCAAAGCAACACAAAGTACGGGAAACCAATTCAAATTAAAGGAGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCAAATAGCTCCTATAAAAGCTTCTTGGATGAAGATAAAAATAAAGATTTAAAGCAGTGGGCATTAAAGAATGCAATCTTCGTCGACATCTCCTTCCCGCTCTACTCAAATTCCAATAAAAGTCAGACACAGAATAGCTAA
Protein Sequence MPRSGAFRVNAKNIFATYPRCSLPKEEALELLRQIPTAVNKKFIKVARELHEDGEPHLHVLLQFEGKLQITNPRLFDLVSGNRSAVFHPNIQGAKSSSDVKSYIEKDGDTISWGEFQIDGRSSRGGQQSANDAYAAAINSGSPTKALNIVKELAPKDFVLHYHNIKSNLDRIFSKPLEPYSCPFRLNSFNNVPQIMKDWASINVVDAAARPDRPISIVIEGESRTGKTMWARSLGAHNYLCGHLDLSPKVYSNNAWYNVIDDVDPHYLKHFKEFMGAQHDWQSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKSFLDEDKNKDLKQWALKNAIFVDISFPLYSNSNKSQTQNS

NCBI Accession AAB87610.1
Location 2124-2417
Gene Name c4
Protein Name c4 protein
Coding Region ATGGGGAACCTCATCTGCACGTACTGCTACAATTCGAAGGTAAGCTCCAGATCACAAATCCAAGACTGTTCGACCTTGTCTCTGGAAACAGATCTGCCGTGTTTCATCCAAACATTCAGGGAGCAAAATCGAGCTCCGACGTCAAGTCCTATATCGAGAAGGATGGAGACACCATCTCATGGGGCGAATTCCAGATCGATGGAAGATCTAGCCGAGGAGGACAACAATCAGCCAACGACGCTTACGCCGCAGCAATTAACTCTGGAAGTCCGACGAAGGCTCTCAACATTGTGA
Protein Sequence MGNLICTYCYNSKVSSRSQIQDCSTLSLETDLPCFIQTFREQNRAPTSSPISRRMETPSHGANSRSMEDLAEEDNNQPTTLTPQQLTLEVRRRLSTL

References More References in PubMed

1

Development of agro-infectious clones for screening resistance against recombinant mungbean yellow mosaic India virus causing golden mosaic disease in vegetable cowpea.

Krishnan N, et al.  3 Biotech. 2022 Jul;12(7):145. doi: 10.1007/s13205-022-03206-2. Epub 2022 Jun 9.

PMID: 35694238
2

Cowpea golden mosaic disease in Gujarat is caused by a Mungbean yellow mosaic India virus isolate with a DNA B variant.

John P, et al.  Arch Virol. 2008;153(7):1359-65. doi: 10.1007/s00705-008-0116-8. Epub 2008 May 31.

PMID: 18516489
3

RNAi-derived transgenic resistance to Mungbean yellow mosaic India virus in cowpea.

Kumar S, et al.  PLoS One. 2017 Oct 27;12(10):e0186786. doi: 10.1371/journal.pone.0186786. eCollection 2017.

PMID: 29077738
4

Mapping of AFLP loci linked to tolerance to cowpea golden mosaic virus.

Rodrigues MA, et al.  Genet Mol Res. 2012 Oct 19;11(4):3789-97. doi: 10.4238/2012.August.17.12.

PMID: 22930435
5

Double-Stranded RNA High-Throughput Sequencing Reveals a New Cytorhabdovirus in a Bean Golden Mosaic Virus-Resistant Common Bean Transgenic Line.

Alves-Freitas DMT, et al.  Viruses. 2019 Jan 21;11(1):90. doi: 10.3390/v11010090.

PMID: 30669683
6

Survey of aphid population in a yellow passion fruit crop and its relationship on the spread Cowpea aphid-borne mosaic virus in a subtropical region of Brazil.

Garcêz RM, et al.  Springerplus. 2015 Sep 22;4:537. doi: 10.1186/s40064-015-1263-5. eCollection 2015.

PMID: 26413443
7

Infectivity analysis of a blackgram isolate of Mungbean yellow mosaic virus and genetic assortment with MYMIV in selective hosts.

Haq QM, et al.  Virus Genes. 2011 Jun;42(3):429-39. doi: 10.1007/s11262-011-0591-y. Epub 2011 Mar 6.

PMID: 21380756
8

Nanopore sequencing of a novel bipartite New World begomovirus infecting cowpea.

Naito FYB, et al.  Arch Virol. 2019 Jul;164(7):1907-1910. doi: 10.1007/s00705-019-04254-5. Epub 2019 Apr 10.

PMID: 30972591
9

First Report of Potato leaf roll virus (PLRV) Naturally Occurring on Jute (Corchorus olitorius) in India.

Biswas C, et al.  Plant Dis. 2014 Nov;98(11):1592. doi: 10.1094/PDIS-07-14-0668-PDN.

PMID: 30699809
10

Two new 'legumoviruses' (genus Begomovirus) naturally infecting soybean in Nigeria.

Alabi OJ, et al.  Arch Virol. 2010 May;155(5):643-56. doi: 10.1007/s00705-010-0630-3. Epub 2010 Mar 13.

PMID: 20229118