Cotton yellow mosaic virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_001669825.1 |
| Isolate | Benin |
| Release date | 2016/6/19 |
| Submitter | Leke,W.N., Khatabi,B., Mignouna,D.B., Brown,J.K., Fondong,V.N. |
| Host | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_030310
ACCGGATGGCCGCGCGCCCGCTTTATGTGGTCCCCCCTTGTGGTCCCCGCGCACTAGACATTGTCGTCCAATAAAATCAACGCCTGGAAGGCTATTTATTTGATTTTGTCTTTATATACTTGGCGCTTAAGTATTTAAATTTCAAAATGTGGGATCCACTTCTGAACGATTTCCCAGACTCTGTCCATGGGCTTCGTTGCATGTTAGCTGTAAAATATTTACAGGCCGTCGAAGATACATACGAGCCCAATACTCTGGGTTGGGATCTAATCAGAGATTTAATCTCCGTCATCAGAGCCAAGAGCTATGTCGAAGCGACCCGGCGATATCATCATTTCAACGCCCGTTTCGAAGGTGCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGCAGCTGTCCCCACTGTCCCAGGCACAAGCAAACGACGTTCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTACAGAATGTACAGAAGCCCTGATGTTCCTCGTGGATGTGAAGGCCCATGTAAGATCCAGTCGTTTGATCAGCGTGATTCCGTAGTCCACACAGGTAACGTTAGGTGTCTAAGTGATGTGACCAGGGGAAATGGTCTCACTCATCGCACAGGTAAACGATTTTGCATTAAGACCGTTTACATATTAGGCAAAGTGTGGATGGACGAAAATGTGAAGAAATCCAATCACACCAACACCTGTATGTTCTGGTTAGTTAGGGATAGACGTCCTTATGGCCCCAGCCCCCAAGATTTCGGTCAGGTTTTTAACATGTTTGATAACGAGCCTAGCACAGCGACTGTCCAGAGTGACAAACGTGATCGCTACCAGGTTTTGAAGAGGTTCCATTATACGGTCACCGGAGGACCCTCTGGTTGCAAGGAGGCTGTAATTGTCAGGCGAAAATACAACTTATATCACAACGTGATTTATAATCATCAAGAGGCTGCCAAGTATGAGAATCATACAGAGAATGCATTGCTGCTGTACATGGCATGTACCCATGCCTCTAATCCCGTTTATGCTAGTCTTAAGATACGGATGTATTTCTACGATTCATTAATGAATTAATAAATATTAAATTTTATTTCATGATTGCTCTCAACTGCAATTGTATTTACAAGTACATTGTACAACACATGATCTACTGCCCTAATGACTAGATTAATTGAAATTACACCGATATTATCCAAGTATTTATACACTTGCGTACTAAATACCCTCAAGAAACGCCCAGTCGGAGGTCGTAAACTCGTCCAGACCTTGAAGTTCAGAAAACACTTGTGAATCCCCAAAGCCTTCCGCAACCGGTGGTTGAACCGGATTTGGATCGATATTATGTGAAACGGATTGTTGAACGGGTTTTCCAGGTGACTTGTTATCGTGAAATAGAGGGGATTTGGCACCTCCCATATAAACACGCCATTCCAAGCTTGAAGCGCAGTGATGGATTCCCCTGTGCGTGAATCCATGGTTATTGCAGTCGATGTGTCTATAGAATGAGCACCCGCAAGAGAGATCCACTCTCCTACGTCGAACTACCTTCTTCTTCGCGAGTCGGTGCCTGACTTTGATCGGCACTGTCGTACAGTGGCTCCCAGAGGGTGACGAATTTTGCATTTGGAATTGTCCAAGCTTTCAATGATGCATTCTTTTCCTCGTCTAGGAATTCTTTATAGGAGGACGTTGGTCCAGGATTGCAGAGGAAGATAGTGGGAATGCCACCTTTAATTTGAATTGGCTTTCCGTACTTGGTATTGCTTTGCCAGTCACGCTGGGCCCCCATGAACTCTTTAAAGTGCTTTAGGTAGTGCGGATCGACGTCATCAATGACGTTATACCAGGCATCATTGGAATACACCTTTGGGCTGAGATCGAGATGCCCACACAGATAATTGTGTGGTCCCAAAGACCGGGCCCACATTGTCTTCCCGGTCCGACTGTCTCCTTCGATGACAATACTGATCGGTCTCCATGGCCGCGCAGCGGAACTCTTTACATTTTCCGACGCCCAATTATCAAGTTCCACCGGAACTCTCGAGAAAGAAGAAGAAAGAAATGGAGAAACATAAGGAGCCGGTGGCTCTACAAAAATCTTATCTAAATTACAATTTATATTATGAAAATGTAAAACAAAGTCTTTTGGGGCTAATTCTTTAATTATGCCAAGAGCTTCCGACTTACTTCCCGAGTTAATTGCTCTGGCGTAAGCGTCATTTGCAGACTCTTGACCTCCTCTTGCAGATCGCCCATCGATCTGAAACTGTCCCCATTCGAGGGTGTCTCCGTCTTTGTCCAGGTACGACTTGACGTCCGAGCTTGATTTAGCTCCCTGAATGTTGGGGTGGAAACTGGCGCTACTGCTTGGGTGTACACAATCGAAGAGGCGATTGTTGGTACATGTGAGTTTGCCCTCGAACTGCAACAGCACATGAAGATGCGGTTCCCCATCTTGATGCAGCTCACGGCAGATTTTGATGAATTTAGGGTTTGTTGGCAACGATAAAGCTCTCAGCTGCTCTAAGAGGTGTTCTTTTGTTAGAGAACACCTTGGGTAAGTGAGAAAATAATTCTTGGCTTGTATTTTAAAACGCGGAGCTCTCATGTTGACTAGTCAATTGGAGACACCCCCCTGAAACTCTCTCCTATGTATTAGAGACAATATATATTGTCTCCAAATGGCATAAATGTAATTCTGTAAAGTTATATACTTTAATTTGAACTCAGATTCCTAGCGGCCATCCGTATAATATT
Gene Information
| NCBI Accession | YP_009256559.1 |
|---|---|
| Location | 147-497 |
| Protein Name | AV2 |
| Coding Region | ATGTGGGATCCACTTCTGAACGATTTCCCAGACTCTGTCCATGGGCTTCGTTGCATGTTAGCTGTAAAATATTTACAGGCCGTCGAAGATACATACGAGCCCAATACTCTGGGTTGGGATCTAATCAGAGATTTAATCTCCGTCATCAGAGCCAAGAGCTATGTCGAAGCGACCCGGCGATATCATCATTTCAACGCCCGTTTCGAAGGTGCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGCAGCTGTCCCCACTGTCCCAGGCACAAGCAAACGACGTTCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTACAGAATGTACAGAAGCCCTGA |
| Protein Sequence | MWDPLLNDFPDSVHGLRCMLAVKYLQAVEDTYEPNTLGWDLIRDLISVIRAKSYVEATRRYHHFNARFEGASKAEFRQPIHQPCSCPHCPRHKQTTFMDVQAHVSKAQDVQNVQKP |
| NCBI Accession | YP_009256560.1 |
|---|---|
| Location | 307-1083 |
| Protein Name | AV1 |
| Coding Region | ATGTCGAAGCGACCCGGCGATATCATCATTTCAACGCCCGTTTCGAAGGTGCGTCGAAGGCTGAATTTCGACAGCCCATACACCAACCGTGCAGCTGTCCCCACTGTCCCAGGCACAAGCAAACGACGTTCATGGACGTACAGGCCCATGTATCGAAAGCCCAGGATGTACAGAATGTACAGAAGCCCTGATGTTCCTCGTGGATGTGAAGGCCCATGTAAGATCCAGTCGTTTGATCAGCGTGATTCCGTAGTCCACACAGGTAACGTTAGGTGTCTAAGTGATGTGACCAGGGGAAATGGTCTCACTCATCGCACAGGTAAACGATTTTGCATTAAGACCGTTTACATATTAGGCAAAGTGTGGATGGACGAAAATGTGAAGAAATCCAATCACACCAACACCTGTATGTTCTGGTTAGTTAGGGATAGACGTCCTTATGGCCCCAGCCCCCAAGATTTCGGTCAGGTTTTTAACATGTTTGATAACGAGCCTAGCACAGCGACTGTCCAGAGTGACAAACGTGATCGCTACCAGGTTTTGAAGAGGTTCCATTATACGGTCACCGGAGGACCCTCTGGTTGCAAGGAGGCTGTAATTGTCAGGCGAAAATACAACTTATATCACAACGTGATTTATAATCATCAAGAGGCTGCCAAGTATGAGAATCATACAGAGAATGCATTGCTGCTGTACATGGCATGTACCCATGCCTCTAATCCCGTTTATGCTAGTCTTAAGATACGGATGTATTTCTACGATTCATTAATGAATTAA |
| Protein Sequence | MSKRPGDIIISTPVSKVRRRLNFDSPYTNRAAVPTVPGTSKRRSWTYRPMYRKPRMYRMYRSPDVPRGCEGPCKIQSFDQRDSVVHTGNVRCLSDVTRGNGLTHRTGKRFCIKTVYILGKVWMDENVKKSNHTNTCMFWLVRDRRPYGPSPQDFGQVFNMFDNEPSTATVQSDKRDRYQVLKRFHYTVTGGPSGCKEAVIVRRKYNLYHNVIYNHQEAAKYENHTENALLLYMACTHASNPVYASLKIRMYFYDSLMN |
| NCBI Accession | YP_009256561.1 |
|---|---|
| Location | 1080-1484 |
| Protein Name | AC3 |
| Coding Region | ATGGATTCACGCACAGGGGAATCCATCACTGCGCTTCAAGCTTGGAATGGCGTGTTTATATGGGAGGTGCCAAATCCCCTCTATTTCACGATAACAAGTCACCTGGAAAACCCGTTCAACAATCCGTTTCACATAATATCGATCCAAATCCGGTTCAACCACCGGTTGCGGAAGGCTTTGGGGATTCACAAGTGTTTTCTGAACTTCAAGGTCTGGACGAGTTTACGACCTCCGACTGGGCGTTTCTTGAGGGTATTTAGTACGCAAGTGTATAAATACTTGGATAATATCGGTGTAATTTCAATTAATCTAGTCATTAGGGCAGTAGATCATGTGTTGTACAATGTACTTGTAAATACAATTGCAGTTGAGAGCAATCATGAAATAAAATTTAATATTTATTAA |
| Protein Sequence | MDSRTGESITALQAWNGVFIWEVPNPLYFTITSHLENPFNNPFHIISIQIRFNHRLRKALGIHKCFLNFKVWTSLRPPTGRFLRVFSTQVYKYLDNIGVISINLVIRAVDHVLYNVLVNTIAVESNHEIKFNIY |
| NCBI Accession | YP_009256562.1 |
|---|---|
| Location | 1225-1632 |
| Protein Name | AC2 |
| Coding Region | ATGCAAAATTCGTCACCCTCTGGGAGCCACTGTACGACAGTGCCGATCAAAGTCAGGCACCGACTCGCGAAGAAGAAGGTAGTTCGACGTAGGAGAGTGGATCTCTCTTGCGGGTGCTCATTCTATAGACACATCGACTGCAATAACCATGGATTCACGCACAGGGGAATCCATCACTGCGCTTCAAGCTTGGAATGGCGTGTTTATATGGGAGGTGCCAAATCCCCTCTATTTCACGATAACAAGTCACCTGGAAAACCCGTTCAACAATCCGTTTCACATAATATCGATCCAAATCCGGTTCAACCACCGGTTGCGGAAGGCTTTGGGGATTCACAAGTGTTTTCTGAACTTCAAGGTCTGGACGAGTTTACGACCTCCGACTGGGCGTTTCTTGAGGGTATTTAG |
| Protein Sequence | MQNSSPSGSHCTTVPIKVRHRLAKKKVVRRRRVDLSCGCSFYRHIDCNNHGFTHRGIHHCASSLEWRVYMGGAKSPLFHDNKSPGKPVQQSVSHNIDPNPVQPPVAEGFGDSQVFSELQGLDEFTTSDWAFLEGI |
| NCBI Accession | YP_009256563.1 |
|---|---|
| Location | 1541-2617 |
| Protein Name | AC1 |
| Coding Region | ATGAGAGCTCCGCGTTTTAAAATACAAGCCAAGAATTATTTTCTCACTTACCCAAGGTGTTCTCTAACAAAAGAACACCTCTTAGAGCAGCTGAGAGCTTTATCGTTGCCAACAAACCCTAAATTCATCAAAATCTGCCGTGAGCTGCATCAAGATGGGGAACCGCATCTTCATGTGCTGTTGCAGTTCGAGGGCAAACTCACATGTACCAACAATCGCCTCTTCGATTGTGTACACCCAAGCAGTAGCGCCAGTTTCCACCCCAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCGTACCTGGACAAAGACGGAGACACCCTCGAATGGGGACAGTTTCAGATCGATGGGCGATCTGCAAGAGGAGGTCAAGAGTCTGCAAATGACGCTTACGCCAGAGCAATTAACTCGGGAAGTAAGTCGGAAGCTCTTGGCATAATTAAAGAATTAGCCCCAAAAGACTTTGTTTTACATTTTCATAATATAAATTGTAATTTAGATAAGATTTTTGTAGAGCCACCGGCTCCTTATGTTTCTCCATTTCTTTCTTCTTCTTTCTCGAGAGTTCCGGTGGAACTTGATAATTGGGCGTCGGAAAATGTAAAGAGTTCCGCTGCGCGGCCATGGAGACCGATCAGTATTGTCATCGAAGGAGACAGTCGGACCGGGAAGACAATGTGGGCCCGGTCTTTGGGACCACACAATTATCTGTGTGGGCATCTCGATCTCAGCCCAAAGGTGTATTCCAATGATGCCTGGTATAACGTCATTGATGACGTCGATCCGCACTACCTAAAGCACTTTAAAGAGTTCATGGGGGCCCAGCGTGACTGGCAAAGCAATACCAAGTACGGAAAGCCAATTCAAATTAAAGGTGGCATTCCCACTATCTTCCTCTGCAATCCTGGACCAACGTCCTCCTATAAAGAATTCCTAGACGAGGAAAAGAATGCATCATTGAAAGCTTGGACAATTCCAAATGCAAAATTCGTCACCCTCTGGGAGCCACTGTACGACAGTGCCGATCAAAGTCAGGCACCGACTCGCGAAGAAGAAGGTAGTTCGACGTAG |
| Protein Sequence | MRAPRFKIQAKNYFLTYPRCSLTKEHLLEQLRALSLPTNPKFIKICRELHQDGEPHLHVLLQFEGKLTCTNNRLFDCVHPSSSASFHPNIQGAKSSSDVKSYLDKDGDTLEWGQFQIDGRSARGGQESANDAYARAINSGSKSEALGIIKELAPKDFVLHFHNINCNLDKIFVEPPAPYVSPFLSSSFSRVPVELDNWASENVKSSAARPWRPISIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKNASLKAWTIPNAKFVTLWEPLYDSADQSQAPTREEEGSST |
| NCBI Accession | YP_009256564.1 |
|---|---|
| Location | 2173-2463 |
| Protein Name | AC4 |
| Coding Region | ATGGGGAACCGCATCTTCATGTGCTGTTGCAGTTCGAGGGCAAACTCACATGTACCAACAATCGCCTCTTCGATTGTGTACACCCAAGCAGTAGCGCCAGTTTCCACCCCAACATTCAGGGAGCTAAATCAAGCTCGGACGTCAAGTCGTACCTGGACAAAGACGGAGACACCCTCGAATGGGGACAGTTTCAGATCGATGGGCGATCTGCAAGAGGAGGTCAAGAGTCTGCAAATGACGCTTACGCCAGAGCAATTAACTCGGGAAGTAAGTCGGAAGCTCTTGGCATAA |
| Protein Sequence | MGNRIFMCCCSSRANSHVPTIASSIVYTQAVAPVSTPTFRELNQARTSSRTWTKTETPSNGDSFRSMGDLQEEVKSLQMTLTPEQLTREVSRKLLA |
References More References in PubMed
| 1 |
Coinfection of Cotton Plants with Watermelon Mosaic Virus and a Novel Polerovirus in China. Yang X, et al. Viruses. 2021 Nov 3;13(11):2210. doi: 10.3390/v13112210. PMID: 34835016 |
|---|---|
| 2 |
Arif M, et al. PLoS One. 2021 May 14;16(5):e0251232. doi: 10.1371/journal.pone.0251232. eCollection 2021. PMID: 33989327 |
| 3 |
A Yellow Mosaic Disease of Soybean in Northern India is Caused by Cotton leaf curl Kokhran virus. Raj SK, et al. Plant Dis. 2006 Jul;90(7):975. doi: 10.1094/PD-90-0975C. PMID: 30781056 |
| 4 |
PLOS ONE Editors. PLoS One. 2023 Jun 14;18(6):e0286780. doi: 10.1371/journal.pone.0286780. eCollection 2023. PMID: 37315010 |
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Identification of New Chickpea Virus and Control of Chickpea Virus Disease. Cun Z. Evid Based Complement Alternat Med. 2022 May 28;2022:6465505. doi: 10.1155/2022/6465505. eCollection 2022. PMID: 35668786 |
| 6 |
Biswas KK, et al. PLoS One. 2020 Apr 22;15(4):e0231886. doi: 10.1371/journal.pone.0231886. eCollection 2020. PMID: 32320461 |
| 7 |
Virus Diseases of Cereal and Oilseed Crops in Australia: Current Position and Future Challenges. Jones RAC, et al. Viruses. 2021 Oct 12;13(10):2051. doi: 10.3390/v13102051. PMID: 34696481 |
| 8 |
Coutts BA, et al. Plant Dis. 2013 Jun;97(6):765-771. doi: 10.1094/PDIS-08-12-0769-RE. PMID: 30722621 |
| 9 |
Sivalingam PN, et al. Acta Virol. 2011;55(4):357-60. doi: 10.4149/av_2011_04_357. PMID: 22149502 |
| 10 |
Jose J, et al. Virology. 2003 Jan 20;305(2):310-7. doi: 10.1006/viro.2002.1768. PMID: 12573576 |