African cassava mosaic Burkina Faso virus
Basic Information
| Genus | Begomovirus |
|---|---|
| NCBI Assembly | GCF_004786835.1 |
| Isolate | Burkina Faso:Ouagadougou |
| Release date | 2021/6/1 |
| Submitter | Tiendrebeogo,F., Lefeuvre,P., Hoareau,M., Harimalala,M.A., Villemot,J., Traore,V.S.E., Konate,G., Traore,A.S., Barro,N., Reynaud,B., Traore,O., Lett,J.M. |
| Host | |
| Vector | |
| Download | Genome |GFF3 |PEP |CDS |
Genomic Organization
JBrowse
Genome
NC_055127
ACCGGTTGGCCCCGCCCCCCTTTAAACGTGGTCCCCTCGCACATGTTGGCCTCGCCTTTTTTTTTGAAAGGGGTCCCCCCCACATGTTTCTCTTACCTGCGTATACTACGGTGGTCCCCGCATGCATGTGTTGTCTGCTATGGATAATGCATGTGTGGCCCACATGCAAATAAATGATCTGCGGGCCTATCGAATGACAGCCTGTGCTACTAAATTATATTTAGTATATTGGTCATTTCTCTGAGTTAATAAAATGGTATATTTTATTGAACTGTTAATATTGCCATTCGATAGTAGTGATTTATAATCATCAATCTGACAACGATCATGAAGGACAATTAAGGCTAGTAGCGTAATCGTGTATGTATTATATATAGGGTTCTAACATGCATGAGTTGGAGTATATCAGGTATCGGAATTATATACATTGATTTGTAATGTATACTATCAGGAAGCAGTCTAGAAACTTCCAAAGGAAATTTAACAGCAATACCACTAACAGATATCCAATCAGGCGTAAGTATGTTGGTGGGCATACTAGACCATCTGTTAGGCGAAGATTGTCATATGAGCCAGTGGAGAGACCGTTGGTCCATAATGTTTTATGTGAGAAGCAACATGGTGATGTGTTTAATTTGCAGCAGAACACAAGTTACACGTCATTTGTGACTTATCCTTCCAGGGGACCATCTGGTGATGGGCGTAGTCGGGATTACATCAAGTTGCAAAGTATGTCCGTCTCGGGAGTGATACATGCGAAGGCGAATGGCATTGATGATCCTATGGAGGTGTCTAATGTAGTTAATGGAGTGTTCGTGTTTAGTGTAATCATGGACACAAAGCCTTATTTACCTGCCGGTGTTCAAGCTCTTCCGACATTTGAAGAGCTGTTCGGATCATATTCCGCTTGTTACGTTAATTTAAGATTATTGAATAATCAACAGCATCGATATAGGGTCTTGCACAGCGTGAAACGTTTCGTGTCATCTGCAGGAGATACTAAGGTATCGCAATTTAGGTTTAATAAGCGATTGAGCACCAGGCGATATAATATTTGGACATCATTCCATGATGGGGATATGGTAAATGCAGGTGGAAATTATAGGAACATAAGCAAGAATGCTATTCTTGTTAGTTATGCTTTTGTATCAGAGCATTCAATGTCTTGTAATCCATTTGTACAAATAGAAACATCCTATGTTGGATGATGTATTATTCATAAATCTTTATGGCTACTGCCTCTATGTGCTATTAAGCACTTGTTTACAGTGTGTTCTATAATGCTTTCAATGTCCTTTTTCGACATGGAGTGGGTTTGTGAAACGGAGTCCCCTGGATCTAGGGAAGCTTCAGGTAGCTTGTGTAGTCCTCGAAGTGGGAATTCAGCCTCAGAGGCATACTGCTTGGAGGATGATTCGTCGAAATCAATTTGTTTGGGGCCTGTGTATCTGATGCTGGTAGAGCGCCCAATTGTGGATTTTGTAGCCCATGTTTCCCCTGGTTGGACCGTGATGGGCCTATATTTAGGCCCAGTGTCATAATCTGTACCGGTCTCATTCTGAATGAGCCTTCGAATGGGCTTAGGTTTTCCAACGGACCAGAAGTCCACACAGTCAGGCCCATAGTCTTTGGATAGTATTTTTATAGTGGGCTGTTTAAATCGAATGTCCGTTGAATGTTTGGCAGCTGACAGCTTCAGTTTTGCCTTAATTTGGGCAAATGTGATGCCATTCTTTACGTTTGAGTCTTCAACCTTATACAGCAGCTGCCATGGTACGTTATCATCAATTGAAAAGTAAGATGCAGAGAAATAATGGAGGTCCACATTACACCCAATGGGAAATGTGAATTGGGCTTGGTCTTGTTGCTCATCACTGAGCCTAGTGTCCCGAATGGTAACGATAACAGAACCCTGTGCATTAAAGGGCACTTGATTCCTGTATTCAATGACGACATGGTCGACCTTCATGCATTTGCCCATGATACGTACCCTTGTTCTTTCAAGGGTCGAAGGAAATTGAAGTGTAATCGGTGATTCATCATTCGTCAGTTTGTATTCTGTTCTTGCTGATTGAATATAGTCGCTGGATATGACAGGTACAGATGTATCCATAGTCAACACTCGGATTATAAGCGTGTCAAAGCCACAGCACCTGTCTCATGATAAACATGAATAATCTATTATTAAACTGGCCGCGCAGCGGAATGGCTTTAATGCAAGATAAATCAGAAGCTTTTGTCAACAGGGTAAACATATTGTAGAAATATATACATATATGTGGTATCCTATCGGAAAAATGCGTCTATGTTTAATCCAAATCAAACATATATACATGCATACAGCATTAGTCGTTGAAACATTATTTATATATAGATATGTACCTGATAATAACTTAAATTGGATATCTGCTGGAGTGGAATGTGGATAGTCTTATTAGCAAAGTGGTCATATAAATATGTTTTATATATTTATTAAGGAGTTATCCAACGAGTGATAGTTTACGTTGTTAGATTTGCATGTTCAAATCTAAAATAAGCAACTACACTATAGTGAGAGAAAGTTAGAGAGAGACGCTCTCAACTAGCACCGATTGACTGCCCTGGATACTTCTCCCCTGTTAATTGGGGTCCTATATATAGTTTGCACCAAATGGCATAATGGTAATAAGTTCAACTTTAATTTGAATGAAAAGGCTCAAAATGCGCAGAACACCCAAGGGGCCAACCGTATAATATT
NC_055128
ACCGGTGGGCGCGAAAAAAAAAAAAGTGGTCCCCTCCCCCCTTTAAACGTGGTCCCCGCGCACTATGTATGTCGGCCAATCATGCTGTAGCGTTAAAGGTCATTTAATAGTGGTGGACCACTATATACTTACAGGCGAAGTTGTTGCTAGTGCGCAATGTGGGATCCACTGGTGAATGAGTTTCCAGACTCGGTGCATGGGCTGAGGTGTATGCTTGCAATTAAATATTTGCAGGCCTTAGAGGATACATACGAGCCCAGTACTTTGGGCCACGATCTGTTTAGAGATCTAATCTCGGTTATCAGGGCTCGTAATTATGTCGAAGCGTCCAGGAGATATCATCATTTCCACGCCAGGATCCAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATACAGGAACCGTGCTACTGCCCCCACTGTCCACGTCACAAATCGAAAACGGGCCTGGATGAACAGGCCCATGTACAGAAAGCCCATGATGTACAGGATGTATAGAAGCCCAGACATACCTAGGGGCTGTGAAGGTCCATGTAAGGTCCAGTCGTTTGAGCAGAGGGATGATGTGAAGCACCTTGGTATCTGTAAGGTGATTAGTGATGTGACACGTGGGCCTGGGCTGACACACAGAGTCGGTAAGAGGTTTTGTATCAAGTCCATTTACATTCTTGGTAAGATCTGGATGGATGAAAATATTAAGAAGCAGAATCACACGAATAATGTAATGTTTTATCTGCTTAGGGATAGAAGGCCTTATGGCAATACGCCCCAAGACTTTGGGCAGATATTTAACATGTTTGATAATGAGCCCAGTACTGCAACAATTAAGAACGATTTGAGGGATAGGTTTCAGGTTTTGAGGAAATTTCATGCCACTGTTATTGGTGGTCCATCTGGCATGAAGGAGCAGGCGTTGGTGAAAAGGTTTTACAGGTTGAATCATCACGTGACATATAATCATCAAGAGGCAGGGAAATACGAGAATCACACAGAGAATGCATTGCTTTTGTATATGGCATGTACTCATGCCTCCAATCCTGTATATGCTACGTTGAAAATACGTATATACTTCTATGACAGTATTGGGAATTAATAAACATTGAATTTTATTTCATGAGTCAACTGACACTCAATAGTTTTTTCAATTACATTGAACAAAACATGATCAGAAGCTCTAATTACACTGTTAATTGAGATAACACCTATATTATCCAAGTATTTAAGTACTTGGTATCTAAAGACCCTTAAGAAAAGACCAGTCTGAGGCCGTAAGGTCGTCCAGATCCTGAAGGTTAGAAAACATTTGTGAATCCCCAACTCCTTCCTCAGGTTGTGATTGAATCGAACTTGGACGGTTATGATGTCCTGGTTCATCAGGAATGGGCGTTGTTGGTGCTCGGTTATTGTGAAATACAGGGGATTGTTTATTTCCCAGGTATACACGCCATTCATTGCTTGAGGAGCAGTGATGAGTTCCCCTGTGCGTAAATCCATGATTGGAGCAGTTGATATGGAGGTAATATGAACAGCCACAAACAAGATCCACTCTCCTACGCCGGATGGCTCGCGTCTTGAATTGTCTGTGACTGACTTTGATTGGAACCGGAGTAGAGTGGTTCTGTGAGGGTGATGAAGATTGCATTCTTTAATGCCCAGGCCTTTAGCGCTTGTTGCTTTTCCTCGTCTAGGAACTCTTTATAGGACGAGGTAGGTCCTGGATTGCAGAGGAAGATAGTGGGAATTCCACCTTTAATTTGAATGGGCTTCCCGTATTTGGTGTTGCTTTGCCAGTCTCTTTGGGCCCCCATGAACTCTTTAAAGTGTTTGAGATAGTGGGGATCGACGTCATCAATGACGTTATACCAAGCATCATTTGAATACACCTTTGGACTCAGATCTAGATGCCCACACAAGTAATTGTGTGGACCTAATGACCTGGCCCACATTGTCTTGCCTGTACGACTATCACCTTCAATAACTATACTAGTCGGTCTCCAAGGCCGCGCAGCGGAACTCATGACGTTCTCAGAAACCCAGTCTTCAAGTTCTTCCGGAACGTGAGTAAAAGAAGAAGATAAAAAAGGAGAAATATATGGCTCTGGAGGGGCCATGAAAATCCTATCTAAATTATTTTTTAAATTATGATATTGAAAAATAAATTCTTTAGGGAGTTTCTCCCTAATAATAGCCATAGCGGCGTCAGCGGAACCTGCATTTAAGGCCTCTGCTGCAGCGTCGTTAGCGTTCTGGCAGCCTCCCCTAGCACTTCTTCCGTCGACCTGGAATTCTCCCCATTCAAGGGTGTCTCCGTCCTTGTCGATGTAGGACTTGACATCGGAGCTTGATTTAGCTCCTTGAATGTTTGGATGGAAATGTGCTGACCTGGTTGGGGATACCAGGTCGAAGAATCGTTGATTTTGGCAGTTGTATTTTCCTTCGAACTGAATAAGCACATGGAGATGAGGCTCCCCATCGTCGTGTAATTCTTTGCAGATTTTGATGTATTTTTTGTTTGTTGGTGTTTCTAAGTTTCTGATTTGGGAAAGTGCTTCGTCTTTTGTGAGAGAGCATTTGGGATATGTGAGGAAATAATTTTTGGAGTTAATTCTGAATTTTCGAGGAGGAGCCATTTGGTCAACTAGCACCGATTGACTCTTCTGTGATTTATCCCTAGTGTATTGGGGTTCTATATATACTTAGCACCAAATGGCATTGTCGTAATAATCCCAACAAATTTTGAACCCCCATTAGCGCCCACCGTTCTAATATT
Gene Information
| NCBI Accession | YP_010084323.1 |
|---|---|
| Location | 438-1208 |
| Gene Name | BV1 |
| Protein Name | movement protein (MP) |
| Coding Region | ATGTATACTATCAGGAAGCAGTCTAGAAACTTCCAAAGGAAATTTAACAGCAATACCACTAACAGATATCCAATCAGGCGTAAGTATGTTGGTGGGCATACTAGACCATCTGTTAGGCGAAGATTGTCATATGAGCCAGTGGAGAGACCGTTGGTCCATAATGTTTTATGTGAGAAGCAACATGGTGATGTGTTTAATTTGCAGCAGAACACAAGTTACACGTCATTTGTGACTTATCCTTCCAGGGGACCATCTGGTGATGGGCGTAGTCGGGATTACATCAAGTTGCAAAGTATGTCCGTCTCGGGAGTGATACATGCGAAGGCGAATGGCATTGATGATCCTATGGAGGTGTCTAATGTAGTTAATGGAGTGTTCGTGTTTAGTGTAATCATGGACACAAAGCCTTATTTACCTGCCGGTGTTCAAGCTCTTCCGACATTTGAAGAGCTGTTCGGATCATATTCCGCTTGTTACGTTAATTTAAGATTATTGAATAATCAACAGCATCGATATAGGGTCTTGCACAGCGTGAAACGTTTCGTGTCATCTGCAGGAGATACTAAGGTATCGCAATTTAGGTTTAATAAGCGATTGAGCACCAGGCGATATAATATTTGGACATCATTCCATGATGGGGATATGGTAAATGCAGGTGGAAATTATAGGAACATAAGCAAGAATGCTATTCTTGTTAGTTATGCTTTTGTATCAGAGCATTCAATGTCTTGTAATCCATTTGTACAAATAGAAACATCCTATGTTGGATGA |
| Protein Sequence | MYTIRKQSRNFQRKFNSNTTNRYPIRRKYVGGHTRPSVRRRLSYEPVERPLVHNVLCEKQHGDVFNLQQNTSYTSFVTYPSRGPSGDGRSRDYIKLQSMSVSGVIHAKANGIDDPMEVSNVVNGVFVFSVIMDTKPYLPAGVQALPTFEELFGSYSACYVNLRLLNNQQHRYRVLHSVKRFVSSAGDTKVSQFRFNKRLSTRRYNIWTSFHDGDMVNAGGNYRNISKNAILVSYAFVSEHSMSCNPFVQIETSYVG |
| NCBI Accession | YP_010084324.1 |
|---|---|
| Location | 1217-2113 |
| Gene Name | BC1 |
| Protein Name | nuclear shuttle protein (NSP) |
| Coding Region | ATGGATACATCTGTACCTGTCATATCCAGCGACTATATTCAATCAGCAAGAACAGAATACAAACTGACGAATGATGAATCACCGATTACACTTCAATTTCCTTCGACCCTTGAAAGAACAAGGGTACGTATCATGGGCAAATGCATGAAGGTCGACCATGTCGTCATTGAATACAGGAATCAAGTGCCCTTTAATGCACAGGGTTCTGTTATCGTTACCATTCGGGACACTAGGCTCAGTGATGAGCAACAAGACCAAGCCCAATTCACATTTCCCATTGGGTGTAATGTGGACCTCCATTATTTCTCTGCATCTTACTTTTCAATTGATGATAACGTACCATGGCAGCTGCTGTATAAGGTTGAAGACTCAAACGTAAAGAATGGCATCACATTTGCCCAAATTAAGGCAAAACTGAAGCTGTCAGCTGCCAAACATTCAACGGACATTCGATTTAAACAGCCCACTATAAAAATACTATCCAAAGACTATGGGCCTGACTGTGTGGACTTCTGGTCCGTTGGAAAACCTAAGCCCATTCGAAGGCTCATTCAGAATGAGACCGGTACAGATTATGACACTGGGCCTAAATATAGGCCCATCACGGTCCAACCAGGGGAAACATGGGCTACAAAATCCACAATTGGGCGCTCTACCAGCATCAGATACACAGGCCCCAAACAAATTGATTTCGACGAATCATCCTCCAAGCAGTATGCCTCTGAGGCTGAATTCCCACTTCGAGGACTACACAAGCTACCTGAAGCTTCCCTAGATCCAGGGGACTCCGTTTCACAAACCCACTCCATGTCGAAAAAGGACATTGAAAGCATTATAGAACACACTGTAAACAAGTGCTTAATAGCACATAGAGGCAGTAGCCATAAAGATTTATGA |
| Protein Sequence | MDTSVPVISSDYIQSARTEYKLTNDESPITLQFPSTLERTRVRIMGKCMKVDHVVIEYRNQVPFNAQGSVIVTIRDTRLSDEQQDQAQFTFPIGCNVDLHYFSASYFSIDDNVPWQLLYKVEDSNVKNGITFAQIKAKLKLSAAKHSTDIRFKQPTIKILSKDYGPDCVDFWSVGKPKPIRRLIQNETGTDYDTGPKYRPITVQPGETWATKSTIGRSTSIRYTGPKQIDFDESSSKQYASEAEFPLRGLHKLPEASLDPGDSVSQTHSMSKKDIESIIEHTVNKCLIAHRGSSHKDL |
| NCBI Accession | YP_010084325.1 |
|---|---|
| Location | 157-498 |
| Gene Name | AV2 |
| Protein Name | AV2 protein |
| Coding Region | ATGTGGGATCCACTGGTGAATGAGTTTCCAGACTCGGTGCATGGGCTGAGGTGTATGCTTGCAATTAAATATTTGCAGGCCTTAGAGGATACATACGAGCCCAGTACTTTGGGCCACGATCTGTTTAGAGATCTAATCTCGGTTATCAGGGCTCGTAATTATGTCGAAGCGTCCAGGAGATATCATCATTTCCACGCCAGGATCCAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATACAGGAACCGTGCTACTGCCCCCACTGTCCACGTCACAAATCGAAAACGGGCCTGGATGAACAGGCCCATGTACAGAAAGCCCATGATGTACAGGATGTATAG |
| Protein Sequence | MWDPLVNEFPDSVHGLRCMLAIKYLQALEDTYEPSTLGHDLFRDLISVIRARNYVEASRRYHHFHARIQGSSKAELRQPIQEPCYCPHCPRHKSKTGLDEQAHVQKAHDVQDV |
| NCBI Accession | YP_010084326.1 |
|---|---|
| Location | 317-1093 |
| Gene Name | AV1 |
| Protein Name | coat protein (CP) |
| Coding Region | ATGTCGAAGCGTCCAGGAGATATCATCATTTCCACGCCAGGATCCAAGGTTCGTCGAAGGCTGAACTTCGACAGCCCATACAGGAACCGTGCTACTGCCCCCACTGTCCACGTCACAAATCGAAAACGGGCCTGGATGAACAGGCCCATGTACAGAAAGCCCATGATGTACAGGATGTATAGAAGCCCAGACATACCTAGGGGCTGTGAAGGTCCATGTAAGGTCCAGTCGTTTGAGCAGAGGGATGATGTGAAGCACCTTGGTATCTGTAAGGTGATTAGTGATGTGACACGTGGGCCTGGGCTGACACACAGAGTCGGTAAGAGGTTTTGTATCAAGTCCATTTACATTCTTGGTAAGATCTGGATGGATGAAAATATTAAGAAGCAGAATCACACGAATAATGTAATGTTTTATCTGCTTAGGGATAGAAGGCCTTATGGCAATACGCCCCAAGACTTTGGGCAGATATTTAACATGTTTGATAATGAGCCCAGTACTGCAACAATTAAGAACGATTTGAGGGATAGGTTTCAGGTTTTGAGGAAATTTCATGCCACTGTTATTGGTGGTCCATCTGGCATGAAGGAGCAGGCGTTGGTGAAAAGGTTTTACAGGTTGAATCATCACGTGACATATAATCATCAAGAGGCAGGGAAATACGAGAATCACACAGAGAATGCATTGCTTTTGTATATGGCATGTACTCATGCCTCCAATCCTGTATATGCTACGTTGAAAATACGTATATACTTCTATGACAGTATTGGGAATTAA |
| Protein Sequence | MSKRPGDIIISTPGSKVRRRLNFDSPYRNRATAPTVHVTNRKRAWMNRPMYRKPMMYRMYRSPDIPRGCEGPCKVQSFEQRDDVKHLGICKVISDVTRGPGLTHRVGKRFCIKSIYILGKIWMDENIKKQNHTNNVMFYLLRDRRPYGNTPQDFGQIFNMFDNEPSTATIKNDLRDRFQVLRKFHATVIGGPSGMKEQALVKRFYRLNHHVTYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIGN |
| NCBI Accession | YP_010084327.1 |
|---|---|
| Location | 1090-1494 |
| Gene Name | AV3 |
| Protein Name | replication enhancer protein (REn) |
| Coding Region | ATGGATTTACGCACAGGGGAACTCATCACTGCTCCTCAAGCAATGAATGGCGTGTATACCTGGGAAATAAACAATCCCCTGTATTTCACAATAACCGAGCACCAACAACGCCCATTCCTGATGAACCAGGACATCATAACCGTCCAAGTTCGATTCAATCACAACCTGAGGAAGGAGTTGGGGATTCACAAATGTTTTCTAACCTTCAGGATCTGGACGACCTTACGGCCTCAGACTGGTCTTTTCTTAAGGGTCTTTAGATACCAAGTACTTAAATACTTGGATAATATAGGTGTTATCTCAATTAACAGTGTAATTAGAGCTTCTGATCATGTTTTGTTCAATGTAATTGAAAAAACTATTGAGTGTCAGTTGACTCATGAAATAAAATTCAATGTTTATTAA |
| Protein Sequence | MDLRTGELITAPQAMNGVYTWEINNPLYFTITEHQQRPFLMNQDIITVQVRFNHNLRKELGIHKCFLTFRIWTTLRPQTGLFLRVFRYQVLKYLDNIGVISINSVIRASDHVLFNVIEKTIECQLTHEIKFNVY |
| NCBI Accession | YP_010084328.1 |
|---|---|
| Location | 1235-1642 |
| Gene Name | AV2 |
| Protein Name | transcription activator protein (TrAP) |
| Coding Region | ATGCAATCTTCATCACCCTCACAGAACCACTCTACTCCGGTTCCAATCAAAGTCAGTCACAGACAATTCAAGACGCGAGCCATCCGGCGTAGGAGAGTGGATCTTGTTTGTGGCTGTTCATATTACCTCCATATCAACTGCTCCAATCATGGATTTACGCACAGGGGAACTCATCACTGCTCCTCAAGCAATGAATGGCGTGTATACCTGGGAAATAAACAATCCCCTGTATTTCACAATAACCGAGCACCAACAACGCCCATTCCTGATGAACCAGGACATCATAACCGTCCAAGTTCGATTCAATCACAACCTGAGGAAGGAGTTGGGGATTCACAAATGTTTTCTAACCTTCAGGATCTGGACGACCTTACGGCCTCAGACTGGTCTTTTCTTAAGGGTCTTTAG |
| Protein Sequence | MQSSSPSQNHSTPVPIKVSHRQFKTRAIRRRRVDLVCGCSYYLHINCSNHGFTHRGTHHCSSSNEWRVYLGNKQSPVFHNNRAPTTPIPDEPGHHNRPSSIQSQPEEGVGDSQMFSNLQDLDDLTASDWSFLKGL |
| NCBI Accession | YP_010084329.1 |
|---|---|
| Location | 1551-2630 |
| Gene Name | AV1 |
| Protein Name | replication associated protein (Rep) |
| Coding Region | ATGGCTCCTCCTCGAAAATTCAGAATTAACTCCAAAAATTATTTCCTCACATATCCCAAATGCTCTCTCACAAAAGACGAAGCACTTTCCCAAATCAGAAACTTAGAAACACCAACAAACAAAAAATACATCAAAATCTGCAAAGAATTACACGACGATGGGGAGCCTCATCTCCATGTGCTTATTCAGTTCGAAGGAAAATACAACTGCCAAAATCAACGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAAGGAGCTAAATCAAGCTCCGATGTCAAGTCCTACATCGACAAGGACGGAGACACCCTTGAATGGGGAGAATTCCAGGTCGACGGAAGAAGTGCTAGGGGAGGCTGCCAGAACGCTAACGACGCTGCAGCAGAGGCCTTAAATGCAGGTTCCGCTGACGCCGCTATGGCTATTATTAGGGAGAAACTCCCTAAAGAATTTATTTTTCAATATCATAATTTAAAAAATAATTTAGATAGGATTTTCATGGCCCCTCCAGAGCCATATATTTCTCCTTTTTTATCTTCTTCTTTTACTCACGTTCCGGAAGAACTTGAAGACTGGGTTTCTGAGAACGTCATGAGTTCCGCTGCGCGGCCTTGGAGACCGACTAGTATAGTTATTGAAGGTGATAGTCGTACAGGCAAGACAATGTGGGCCAGGTCATTAGGTCCACACAATTACTTGTGTGGGCATCTAGATCTGAGTCCAAAGGTGTATTCAAATGATGCTTGGTATAACGTCATTGATGACGTCGATCCCCACTATCTCAAACACTTTAAAGAGTTCATGGGGGCCCAAAGAGACTGGCAAAGCAACACCAAATACGGGAAGCCCATTCAAATTAAAGGTGGAATTCCCACTATCTTCCTCTGCAATCCAGGACCTACCTCGTCCTATAAAGAGTTCCTAGACGAGGAAAAGCAACAAGCGCTAAAGGCCTGGGCATTAAAGAATGCAATCTTCATCACCCTCACAGAACCACTCTACTCCGGTTCCAATCAAAGTCAGTCACAGACAATTCAAGACGCGAGCCATCCGGCGTAG |
| Protein Sequence | MAPPRKFRINSKNYFLTYPKCSLTKDEALSQIRNLETPTNKKYIKICKELHDDGEPHLHVLIQFEGKYNCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQVDGRSARGGCQNANDAAAEALNAGSADAAMAIIREKLPKEFIFQYHNLKNNLDRIFMAPPEPYISPFLSSSFTHVPEELEDWVSENVMSSAARPWRPTSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDWQSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEFLDEEKQQALKAWALKNAIFITLTEPLYSGSNQSQSQTIQDASHPA |
| NCBI Accession | YP_010084330.1 |
|---|---|
| Location | 2216-2473 |
| Gene Name | AV4 |
| Protein Name | AV4 protein |
| Coding Region | ATGGGGAGCCTCATCTCCATGTGCTTATTCAGTTCGAAGGAAAATACAACTGCCAAAATCAACGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCAAACATTCAAGGAGCTAAATCAAGCTCCGATGTCAAGTCCTACATCGACAAGGACGGAGACACCCTTGAATGGGGAGAATTCCAGGTCGACGGAAGAAGTGCTAGGGGAGGCTGCCAGAACGCTAACGACGCTGCAGCAGAGGCCTTAA |
| Protein Sequence | MGSLISMCLFSSKENTTAKINDSSTWYPQPGQHISIQTFKELNQAPMSSPTSTRTETPLNGENSRSTEEVLGEAARTLTTLQQRP |
References More References in PubMed
| 1 |
Epidemiological assessment of cassava mosaic disease in Burkina Faso. Soro M, et al. Plant Pathol. 2021 Dec;70(9):2207-2216. doi: 10.1111/ppa.13459. Epub 2021 Sep 9. PMID: 35873883 |
|---|---|
| 2 |
Tiendrébéogo F, et al. Virol J. 2012 Mar 14;9:67. doi: 10.1186/1743-422X-9-67. PMID: 22416906 |
| 3 |
Cassava mosaic disease in Burkina Faso: epidemiological aspects and disease management perspectives. Sawadogo S, et al. Discov Agric. 2025;3(1):197. doi: 10.1007/s44279-025-00386-2. Epub 2025 Oct 7. PMID: 41069991 |
| 4 |
Identification and Distribution of Begomoviruses Infecting Cassava Fields in Sierra Leone. Saffa MD, et al. Plants (Basel). 2025 Jul 11;14(14):2142. doi: 10.3390/plants14142142. PMID: 40733379 |
| 5 |
Ahoya DKD, et al. J Agric Food Res. 2025 Jun;21:101827. doi: 10.1016/j.jafr.2025.101827. PMID: 40487127 |
| 6 |
Swanson MM, et al. Biochimie. 1993;75(8):707-11. doi: 10.1016/0300-9084(93)90101-w. PMID: 7506936 |