Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000838805.1 |
Isolate | Egypt: Aswan |
Release date | 2015/2/12 |
Submitter | Bigarre,L., Chazly,M., Salah,M., Ibrahim,M., Padidam,M., Nicole,M., Peterschmitt,M., Fauquet,C., Thouvenel,J.C., Thouvenel,J. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_062867.1 |
---|---|
Location | 163-531 |
Gene Name | AV2 |
Protein Name | AV2 protein |
Coding Region | ATGTGGGATCCGTTATTGAACGACTTCCCTGAATCCGTTCACGGTTTCCGTTGTATGCTCGCCGTGAAATATTTGCAGGCTGTTCGAGAGTCGTACGATCCTTCCACTCTTGGGTACGATCTTCTTAGCGATCTCATCGGAGTTGTTCGCCGTACCAACTATGTCGAAGCGACCAGCAGATATCATCATTTCCACTCCCGCCTCGAAAGTGCGTCGCCGTCTGAACTTCGACAGTCCCGGGTTATCCTCTGCACGTGCCCCCACTGTCCTCGTCACAAACAAACGCCGGGCGTGGTCCAACAGACCCAATTACAGGAAGCCCAGAATGTACAGAATGTATCGGAGCCCAGATGTCCCAAAGGGGTGTGA |
Protein Sequence | MWDPLLNDFPESVHGFRCMLAVKYLQAVRESYDPSTLGYDLLSDLIGVVRRTNYVEATSRYHHFHSRLESASPSELRQSRVILCTCPHCPRHKQTPGVVQQTQLQEAQNVQNVSEPRCPKGV |
NCBI Accession | NP_062868.1 |
---|---|
Location | 323-1099 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGACCAGCAGATATCATCATTTCCACTCCCGCCTCGAAAGTGCGTCGCCGTCTGAACTTCGACAGTCCCGGGTTATCCTCTGCACGTGCCCCCACTGTCCTCGTCACAAACAAACGCCGGGCGTGGTCCAACAGACCCAATTACAGGAAGCCCAGAATGTACAGAATGTATCGGAGCCCAGATGTCCCAAAGGGGTGTGAAGGTCCATGTAAGGTCCAGTCATATGAACAGCGTGATGATGTGAAGCATACTGGTATTGTTCGCTGTGTTTCTGATGTGACTAAGGGAACTGGGCTTACTCATCGTACTGGAAAGCGTTTCACAATCAAATCCATTTATATTCTTGGTAAGGTATGGATGGATGAGAACATTAAGAAGCAGAATCACACCAACAATGTGATGTTTTTCCTTGTTCGTGATAGAAGACCTTATGGGAATTCCCCGATGGATTTTGGTCAAGTTTTTAACATGTTTGATAATGAGCCCAGTACTGCTACTATAAAGAATGATTATCGAGATCGTTTCCAGGTGATGCGTAAGTTTAGTGCTACTGTAACTGGTGGTCCTTCTGGGATGAAGGAACAGGCTCTTGTTCGTAGGTTTTTTAAGATTAACAGTCAGATTGTGTATAACCATCAGGAAGCTGCGAAGTATGAGAACCATACTGAGAATGCTTTGTTGTTGTATATGGCATGTACTCATGCTTCTAATCCTGTGTATGCTACGTTAAAGATACGGATCTACTTCTACGATTCGGTATCTAATTAA |
Protein Sequence | MSKRPADIIISTPASKVRRRLNFDSPGLSSARAPTVLVTNKRRAWSNRPNYRKPRMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSDVTKGTGLTHRTGKRFTIKSIYILGKVWMDENIKKQNHTNNVMFFLVRDRRPYGNSPMDFGQVFNMFDNEPSTATIKNDYRDRFQVMRKFSATVTGGPSGMKEQALVRRFFKINSQIVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSVSN |
NCBI Accession | NP_062869.1 |
---|---|
Location | 1096-1497 |
Gene Name | AC3 |
Protein Name | AC3 protein |
Coding Region | ATGGATTCACGCACAGGGGAACTCATCACTGCGCATCAGACAGAGAATGGCGTACTTATCTGGACAATCAACAATCCCCTGTATTTCAAAACCATAAAGGAGATTCGTCTAACGCACGGGAATCAAACAATGGTAGAGATGCAGATAAGATTCAACTACAACCTCAGGAAGGAATTGGGGATTCACAAATGTTTCATGAACTTCAGGGTCTGGACGATCTCACGCCCTCCGACTGGTCTTTTCTTAAACGTATTTAGGAAGCAGATTATGAAATATTTGTATAGAATAGGCGTAATTTCAATTAACAATATAATTAGGGCAGTCAATCATGTTTTGTACGATGTATTGCAAACAACAGTGGCAAGTGAATTCACTCACAATATTCAAATAAAATTGTATTAA |
Protein Sequence | MDSRTGELITAHQTENGVLIWTINNPLYFKTIKEIRLTHGNQTMVEMQIRFNYNLRKELGIHKCFMNFRVWTISRPPTGLFLNVFRKQIMKYLYRIGVISINNIIRAVNHVLYDVLQTTVASEFTHNIQIKLY |
NCBI Accession | NP_062870.1 |
---|---|
Location | 1241-1645 |
Gene Name | AC2 |
Protein Name | AC2 protein |
Coding Region | ATGCGACCTTCATCACCCTCTCAAATCCGCTGTACTCAGGTACCAATCAAAGTCCAGCATCGGGAGGCCAAGAAGAGAGCAATCAGGAGACGCAGGATTGACATCCCTTGTGGTTGCACGGTATACGTAGCCTTCACGTGCAGAGACAATGGATTCACGCACAGGGGAACTCATCACTGCGCATCAGACAGAGAATGGCGTACTTATCTGGACAATCAACAATCCCCTGTATTTCAAAACCATAAAGGAGATTCGTCTAACGCACGGGAATCAAACAATGGTAGAGATGCAGATAAGATTCAACTACAACCTCAGGAAGGAATTGGGGATTCACAAATGTTTCATGAACTTCAGGGTCTGGACGATCTCACGCCCTCCGACTGGTCTTTTCTTAAACGTATTTAG |
Protein Sequence | MRPSSPSQIRCTQVPIKVQHREAKKRAIRRRRIDIPCGCTVYVAFTCRDNGFTHRGTHHCASDREWRTYLDNQQSPVFQNHKGDSSNARESNNGRDADKIQLQPQEGIGDSQMFHELQGLDDLTPSDWSFLKRI |
NCBI Accession | NP_062871.1 |
---|---|
Location | 1545-2633 |
Gene Name | AC1 |
Protein Name | Rep |
Coding Region | ATGGCTCCTCCCCACAGATTCCAAATATATGCCAAGAATTATTTCCTAACTTTCCCAAAATGTTCTCTAACAAAAGAGGAAGCCCTAGAGCAAATACAGAAAATAAGCACAGCTTCAAACAAGAAATATATCAAGATCTGCAGAGAGCTTCACGAGGATGGCCAACCTCATCTACATGTGCTTCTCCAGTTCGAAGGGAAGTTCAAGTGCCAAAATCAGAGACTCTTCGACCTGGTCTCCCCAAATAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTGGAATGGGGAGAATTCCAGATCGACGGAAGATCTGCAAGAGGAGGACAACAGACCGCCAATGACGCTTACGCCGCAGCGCTTAACGCAGGAAGTAAGGCAGAGGCTCTTAGGGTTATAAGGGAGTTAGCTCCCAAAGATTTTGTTTTACAATTTCATAATTTAAATAGTAATTTAGAGAGGATTTTTCAGGAGCCTCCAGCTCCTTATGTTTCTCCTTTTTTGTCTTCTTCGTTCGACCAAGTTCCAGAAGAACTTGAAGAATGGGCGGCGGAGAACGTCGTTGAGGCCGCTGCGCGGCCAAGTAGACCGATTAGTATAGTGATTGAAGGGGAAAGCAGAACAGGAAAGACCGTATGGGCCAGAAGTCTTGGGCCTCACAATTATCTGTGCGGTCATCTTGATCTGAGCCCAAAGGTGTTCAGTAATGACGCATGGTATAACGTCATAGATGATGTTGACCCGCATTATCTGAAACACTTTAAGGAGTTCATGGGGGCACAAAAGGACTGGCAAAGCAACACAAAATACGGGAAACCAGTTCAAATTAAAGGGGGCATCCCAACAATCTTCCTCTGCAATCCAGGTCCCAATTCCTCTTATAAAGAGTATTTAGACGAGGACAAGAACGCGCATCTCAAATCCTGGGCATTAAAGAATGCGACCTTCATCACCCTCTCAAATCCGCTGTACTCAGGTACCAATCAAAGTCCAGCATCGGGAGGCCAAGAAGAGAGCAATCAGGAGACGCAGGATTGA |
Protein Sequence | MAPPHRFQIYAKNYFLTFPKCSLTKEEALEQIQKISTASNKKYIKICRELHEDGQPHLHVLLQFEGKFKCQNQRLFDLVSPNRSAHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKAEALRVIRELAPKDFVLQFHNLNSNLERIFQEPPAPYVSPFLSSSFDQVPEELEEWAAENVVEAAARPSRPISIVIEGESRTGKTVWARSLGPHNYLCGHLDLSPKVFSNDAWYNVIDDVDPHYLKHFKEFMGAQKDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEDKNAHLKSWALKNATFITLSNPLYSGTNQSPASGGQEESNQETQD |
NCBI Accession | NP_062872.1 |
---|---|
Location | 2183-2476 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGCCAACCTCATCTACATGTGCTTCTCCAGTTCGAAGGGAAGTTCAAGTGCCAAAATCAGAGACTCTTCGACCTGGTCTCCCCAAATAGGTCAGCACATTTCCATCCAAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACATCGACAAGGATGGAGACACACTGGAATGGGGAGAATTCCAGATCGACGGAAGATCTGCAAGAGGAGGACAACAGACCGCCAATGACGCTTACGCCGCAGCGCTTAACGCAGGAAGTAAGGCAGAGGCTCTTAGGGTTATAA |
Protein Sequence | MANLIYMCFSSSKGSSSAKIRDSSTWSPQIGQHISIQTFRELNPAPTSSPTSTRMETHWNGENSRSTEDLQEEDNRPPMTLTPQRLTQEVRQRLLGL |
1 |
Identification of Cotton leaf curl Gezira virus in Papaya in Oman. Khan AJ, et al. Plant Dis. 2012 Nov;96(11):1704. doi: 10.1094/PDIS-05-12-0438-PDN. PMID: 30727467 |
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2 |
Idris AM, et al. Virus Res. 2005 Apr;109(1):19-32. doi: 10.1016/j.virusres.2004.10.002. Epub 2004 Nov 23. PMID: 15826909 |
3 |
Hussain K, et al. Cell Mol Biol (Noisy-le-grand). 2022 Sep 30;68(9):129-134. doi: 10.14715/cmb/2022.68.9.20. PMID: 36905263 |
4 |
Fiallo-Olivé E, et al. Virus Res. 2013 Dec 26;178(2):506-10. doi: 10.1016/j.virusres.2013.10.006. Epub 2013 Oct 16. PMID: 24140627 |
5 |
Tiendrébéogo F, et al. Virol J. 2010 Feb 23;7:48. doi: 10.1186/1743-422X-7-48. PMID: 20178575 |
6 |
Introduction of Cotton leaf curl Gezira virus into the United Arab Emirates. Idris A, et al. Plant Dis. 2014 Nov;98(11):1593. doi: 10.1094/PDIS-08-14-0838-PDN. PMID: 30699838 |
7 |
Idris AM, et al. Plant Dis. 2000 Jul;84(7):809. doi: 10.1094/PDIS.2000.84.7.809C. PMID: 30832125 |
8 |
Molecular analysis of Cotton leaf curl virus-Sudan reveals an evolutionary history of recombination. Idris AM, et al. Virus Genes. 2002 Jun;24(3):249-56. doi: 10.1023/a:1015380600089. PMID: 12086146 |
9 |
Shih SL, et al. Arch Virol. 2009;154(2):369-72. doi: 10.1007/s00705-008-0304-6. Epub 2009 Jan 21. PMID: 19156351 |
10 |
Conflon D, et al. Virus Res. 2018 Jul 15;253:124-134. doi: 10.1016/j.virusres.2018.06.003. Epub 2018 Jun 15. PMID: 29908896 |