Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_000865045.1 |
Isolate | India |
Release date | 2015/2/13 |
Submitter | Chowda Reddy,R.V., Muniyappa,V., Colvin,J., Seal,S. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_277435.1 |
---|---|
Location | 131-478 |
Gene Name | AV2 |
Protein Name | CP expression activator |
Coding Region | ATGTGGGATCCACTGTTAAACGAGTTCCCCGAGACGGAACACGGGTTTCGTTGCGTGCTTGCTATCAAATATCTTCAACAATTGTCTGAAGAATACTCCCCTGATACGCTAGGTTACGATTTAATCCGCGATTTAATGTCAATTTTGCGTTCTAGGAATTATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCTTATGCAACCCGTGCAGTTGTCCCCACTGTCCGCGTCACAAAATCTCGCATGTGGGCGAACAGGCCCATGAACCGCAAGCCCAGAATGTACAGGATGTACAGAAGCCTTGA |
Protein Sequence | MWDPLLNEFPETEHGFRCVLAIKYLQQLSEEYSPDTLGYDLIRDLMSILRSRNYVEASCRYRHFYPRVEGASASELRQPLCNPCSCPHCPRHKISHVGEQAHEPQAQNVQDVQKP |
NCBI Accession | YP_277436.1 |
---|---|
Location | 291-1061 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGTCCTGCCGATATCGTCATTTCTACCCCCGCGTCGAAGGTGCGTCGGCGTCTGAACTTCGACAGCCCTTATGCAACCCGTGCAGTTGTCCCCACTGTCCGCGTCACAAAATCTCGCATGTGGGCGAACAGGCCCATGAACCGCAAGCCCAGAATGTACAGGATGTACAGAAGCCTTGATGTTCCAAGAGGCTGTGAGGGTCCATGTAAGGTCCAGTCGTTTGAGTCTAGACACGATGTAGTCCATATAGGTAAGGTCATGTGCATTAGTGATGTTACACGTGGTACTGGGTTAACCCATAGAGTTGGTAAGCGTTTTTGTGTGAAGTCTGTCTATGTTTTGGGCAAGATATGGATGGATGAGAACATCAAGACCAAGAATCACACGAACAGTGTCATTTTTTTTCTTGTTCGTGACCGTCGTCCTGTTGACAAGCCACAAGATTTTGGAGAGGTGTTCAATATGTTTGACAACGAGCCTAGTACTGCTACGGTGAAGAATATGCATAGAGATCGTTATCAGGTGCTGAGGAAGTGGCATGCAACTGTTACTGGTGGACAGTACGCCTCAAAGGAACAGGCATTAGTTAAGAAGTTTGTTAGGGTTAATAATTATGTTGTTTATAACCAGCAAGAGGCTGGGAACTATGAGAATCATTCTGAGAATGCTTTGATGTTGTATATGGCATGTACCCATGCCTCAAATCCTGTATACGCTACGCTTAAGATCCGTATTTATTTCTATGATTCCGTAACCAATTGA |
Protein Sequence | MSKRPADIVISTPASKVRRRLNFDSPYATRAVVPTVRVTKSRMWANRPMNRKPRMYRMYRSLDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGTGLTHRVGKRFCVKSVYVLGKIWMDENIKTKNHTNSVIFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGNYENHSENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession | YP_277437.1 |
---|---|
Location | 1064-1468 |
Gene Name | AC3 |
Protein Name | replication enhancer |
Coding Region | ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGTCTATATCTCGGAAGTTCCAAATCCCCTATATTTCAAGATCCTAAGCCTCCCCAACCGGCCATTCACAAACAACATGGACATAATAACGATCAGAATCCAATTCAATTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACACAGGTCCTCAAGTACCTCAACAATCTAGGTGTAATCTCAATTAATTCAATTATTAGAGCAGTTGATCATGTATTGTACAAGAAAATAGAAAACACCATGTTTGTAGACCAAACTTCAGAAATAAAATTCGATCTTTATTAA |
Protein Sequence | MDSRTGEPITAAQAWSGVYISEVPNPLYFKILSLPNRPFTNNMDIITIRIQFNYNLRRALGVHKCFLTFRIWTTLHPPTGLFLRVFKTQVLKYLNNLGVISINSIIRAVDHVLYKKIENTMFVDQTSEIKFDLY |
NCBI Accession | YP_277438.1 |
---|---|
Location | 1161-1613 |
Gene Name | AC2 |
Protein Name | transcriptional activator |
Coding Region | ATGCGATCTTCATCACCCTTGAAGGACCATTGTACTCAGGTACCAATCAAAGTTCAGCACAGGGAAGCGAAGAGACGCAACAGGAGGAGGAGAGTAGATCTTGAATGCGGGTGTTCTTATTATTTGTCTATCAACTGCCACAACCATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAAGCATGGAGTGGCGTCTATATCTCGGAAGTTCCAAATCCCCTATATTTCAAGATCCTAAGCCTCCCCAACCGGCCATTCACAAACAACATGGACATAATAACGATCAGAATCCAATTCAATTACAACCTTCGGAGAGCTCTGGGAGTGCACAAGTGTTTTCTGACCTTCCGAATCTGGACGACCTTACACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACACAGGTCCTCAAGTACCTCAACAATCTAGGTGTAATCTCAATTAA |
Protein Sequence | MRSSSPLKDHCTQVPIKVQHREAKRRNRRRRVDLECGCSYYLSINCHNHGFTHRGTHHCSSSMEWRLYLGSSKSPIFQDPKPPQPAIHKQHGHNNDQNPIQLQPSESSGSAQVFSDLPNLDDLTPSDWSFLKGIQNTGPQVPQQSRCNLN |
NCBI Accession | YP_277439.1 |
---|---|
Location | 1510-2598 |
Gene Name | AC1 |
Protein Name | replication-associated protein |
Coding Region | ATGCATCCGAAACGTTTTCTTATTAATTCCAAAAATTATTTCCTCACTTATCCAAATTGCTCTCTTACAAAAGAAGAAGCACTTTCCCAACTTCAAAACCTACAAACTCCTACAAATAAAAAATTCATCAAGATCTGCAGAGAGCTCCATGAAAATGGGGAACCTCATATTCACGTGCTCATCCAGTTCGAAGGGAAGTACAAGTGCCAAAATCAGAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCAGATGTCAAGGACTACATCGACAAGGACGGAGACACTCTCGAGTGGGGAGAGTTTCAGATCGATGGAAGATCAGCAAGAGGAGGACAACAGACAGCCAACGACGCTTACGCCGCAGCGCTTAACGCGGGAAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAACTAGCTCCTAAAGATTTTGTACTACAATTTCATAATTTAAATGCAAATCTAGACAGGATCTTTCAGGAGCCACCAGCTCCTTATGTTTCTCCTTTTTCTTTTTCTTCTTTTGATCAAGTTCCAGAAGAACTTGAAGTTTGGGCCATCGATAACGTTGTCGATGCCGCTGCGCGGCCCCTTAGACCTCGAAGTATAGTAATTGAGGGAGATAGTCGAACGGGGAAGACGATGTGGGCCAGATCACTGGGACCACATAACTATTTATGCGGACATCTGGACCTGAGTCCCAAGGTCTACAATAACGACGCCTGGTATAACGTCATTGATGACGTCGATCCGCATTTCCTCAAGCACTTTAAGGAGTTCATGGGGGCCCAAAGGGACTGGCAATCCAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGCGGGATACCGACAATCTTCCTCTGCAATCCAGGTCCCAACAGCAGTTATAAAGAATTTCTCGACGAGGAAAAGAACACAGCACTAAAGAACTGGGCAGTAAAGAATGCGATCTTCATCACCCTTGAAGGACCATTGTACTCAGGTACCAATCAAAGTTCAGCACAGGGAAGCGAAGAGACGCAACAGGAGGAGGAGAGTAGATCTTGA |
Protein Sequence | MHPKRFLINSKNYFLTYPNCSLTKEEALSQLQNLQTPTNKKFIKICRELHENGEPHIHVLIQFEGKYKCQNQRFFDLVSPTRSAHFHPNIQGAKSSSDVKDYIDKDGDTLEWGEFQIDGRSARGGQQTANDAYAAALNAGSKSEALRVIKELAPKDFVLQFHNLNANLDRIFQEPPAPYVSPFSFSSFDQVPEELEVWAIDNVVDAAARPLRPRSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEFLDEEKNTALKNWAVKNAIFITLEGPLYSGTNQSSAQGSEETQQEEESRS |
NCBI Accession | YP_277440.1 |
---|---|
Location | 2142-2444 |
Gene Name | AC4 |
Protein Name | AC4 |
Coding Region | ATGGGGAACCTCATATTCACGTGCTCATCCAGTTCGAAGGGAAGTACAAGTGCCAAAATCAGAGATTCTTCGACCTGGTATCCCCAACCAGGTCAGCACATTTCCATCCGAACATTCAGGGAGCTAAATCAAGCTCAGATGTCAAGGACTACATCGACAAGGACGGAGACACTCTCGAGTGGGGAGAGTTTCAGATCGATGGAAGATCAGCAAGAGGAGGACAACAGACAGCCAACGACGCTTACGCCGCAGCGCTTAACGCGGGAAGTAAGTCAGAGGCTCTTAGAGTCATTAAGGAACTAG |
Protein Sequence | MGNLIFTCSSSSKGSTSAKIRDSSTWYPQPGQHISIRTFRELNQAQMSRTTSTRTETLSSGESFRSMEDQQEEDNRQPTTLTPQRLTREVSQRLLESLRN |
1 |
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7 |
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8 |
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9 |
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