Genus | Begomovirus |
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NCBI Assembly | GCF_000842045.1 |
Release date | 2015/2/12 |
Submitter | Zhou,X., Liu,Y., Robinson,D.J., Harrison,B.D. |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | NP_795357.1 |
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Location | 121-486 |
Gene Name | AV2 |
Protein Name | AV2 protein |
Coding Region | ATGTGGGATCCACTAGTAAACGAATTCCCGGATACGGTGCACGGGTTTCGTTGTATGCTTTCTGTCAAATATTTGCAACTTTTGTCGCAGGATTATTCTCCAGATACCCTTGGTTACGAGTTAATACGTGATTTAATCTGTATTCTACGCTCCCGTAATTATGTCGAAGCGAGCTGCCGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAAACAACAGGCATGGACAAACAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAGGGGATGTGA |
Protein Sequence | MWDPLVNEFPDTVHGFRCMLSVKYLQLLSQDYSPDTLGYELIRDLICILRSRNYVEASCRYRHFYARVESTPASELRQPIHQPCCCPHCPRHKTTGMDKQAYEQETQNVPDVQKSGCSKGM |
NCBI Accession | NP_795358.1 |
---|---|
Location | 281-1051 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGTCGAAGCGAGCTGCCGATATCGTCATTTCTACGCCCGCGTCGAAAGTACGCCGGCGTCTGAACTTCGGCAGCCCATACACCAGCCGTGCTGCTGCCCCCATTGTCCGCGTCACAAAACAACAGGCATGGACAAACAGGCCTATGAACAGGAAACCCAGAATGTACCGGATGTACAGAAGTCCGGATGTTCCAAGGGGATGTGAGGGTCCCTGTAAGGTACAGTCGTTTGAATCTCGACACGATGTCGTTCATATTGGTAAGGTAATGTGTATTTCGGATGTTACGCGTGGAGTCGGTTTGACCCATCGTATAGGTAAGCGTTTTTGTGTCAAGTCAGTTTATGTTTTAGGTAAGATATGGATGGACGAGAACATCAAGACCAAGAACCATACGAATTCGGTGATGTTTTTCCTTGTTCGTGATCGACGACCGGTAGATAAACCACAAGATTTTGGTGAAGTATTTAATATGTTTGATAACGAGCCCAGTACGGCGACCGTGAAGAACATGCATAGGGATCGGTACCAGGTGTTGAGGAAATGGCATGCAACCGTTACTGGTGGTCAATATGCGAGTAAGGAGCAGGCATTGGTCAAGAAGTTTGTTAGGGTTAACAACTACGTTGTTTACAACCAGCAGGAAGCAGGAAAATACGAGAATCACACCGAGAATGCATTGATGCTTTATATGGCTTGTACCCATGCTAGTAACCCAGTTTATGCTACGCTTAAGATTAGAATATATTTTTATGACTCTGTAACGAACTAA |
Protein Sequence | MSKRAADIVISTPASKVRRRLNFGSPYTSRAAAPIVRVTKQQAWTNRPMNRKPRMYRMYRSPDVPRGCEGPCKVQSFESRHDVVHIGKVMCISDVTRGVGLTHRIGKRFCVKSVYVLGKIWMDENIKTKNHTNSVMFFLVRDRRPVDKPQDFGEVFNMFDNEPSTATVKNMHRDRYQVLRKWHATVTGGQYASKEQALVKKFVRVNNYVVYNQQEAGKYENHTENALMLYMACTHASNPVYATLKIRIYFYDSVTN |
NCBI Accession | NP_795359.1 |
---|---|
Location | 1054-1458 |
Gene Name | AC3 |
Protein Name | AC3 protein |
Coding Region | ATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCATTCAACGAATGGCGTCTTTATCTGGGAGGTTCCAAATCCCCTTTATTTCAAAATCCTCAGCCACGACAACCGTCCATTCACGACGAACATGGACATCATAACAATGAGGATCCAATTCAACTACAACCTTCGGAAAGCTCTGGGAGTGCACAAGTGTTTTCTAACCTTCCGAATCTGGACGACCTTATACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTACTCAAGTATCTCAACAATCTAGGTGTAATCTCACTTAATTTAGTTATTAAAGCCGTTGAACATGTATTGTACAATGTAATTAATCAAACAATGTATGTAGACCAATATTCAGATATAAAATTCAAACTTTATTAA |
Protein Sequence | MDSRTGERITAAHSTNGVFIWEVPNPLYFKILSHDNRPFTTNMDIITMRIQFNYNLRKALGVHKCFLTFRIWTTLYPPTGLFLRVFKTQVLKYLNNLGVISLNLVIKAVEHVLYNVINQTMYVDQYSDIKFKLY |
NCBI Accession | NP_795360.1 |
---|---|
Location | 1151-1603 |
Gene Name | AC2 |
Protein Name | AC2 protein |
Coding Region | ATGCAGTCTTCATCACCCTCGAGGAACCACTGTACTCAATTGCCCATCAAAGTCCAGCACAGGGAGGCCAAGAGGAGGACCAGGAGGAGGAGAGTGGATCTTGAATGTGGATGCAGCTATTACCTAAGTATCAACTGCCACAACCATGGATTCTCGCACAGGGGAACGCATCACTGCAGCTCATTCAACGAATGGCGTCTTTATCTGGGAGGTTCCAAATCCCCTTTATTTCAAAATCCTCAGCCACGACAACCGTCCATTCACGACGAACATGGACATCATAACAATGAGGATCCAATTCAACTACAACCTTCGGAAAGCTCTGGGAGTGCACAAGTGTTTTCTAACCTTCCGAATCTGGACGACCTTATACCCTCCGACTGGTCTTTTCTTAAGGGTATTCAAAACCCAAGTACTCAAGTATCTCAACAATCTAGGTGTAATCTCACTTAA |
Protein Sequence | MQSSSPSRNHCTQLPIKVQHREAKRRTRRRRVDLECGCSYYLSINCHNHGFSHRGTHHCSSFNEWRLYLGGSKSPLFQNPQPRQPSIHDEHGHHNNEDPIQLQPSESSGSAQVFSNLPNLDDLIPSDWSFLKGIQNPSTQVSQQSRCNLT |
NCBI Accession | NP_795354.1 |
---|---|
Location | 1500-2591 |
Gene Name | AC1 |
Protein Name | AC1 protein |
Coding Region | ATGCCCAGAAATAATTCTTTTTGCATAAATGCAAAAAATATTTTTCTTACTTTCCCAAAATGCCCAATTCCAAAAGAACAGATGTTAGATATATTATCTAACATTTCATGCCCTTCAGACAAATTATTCATTAGGGTTGCACAAGAAAAACACCAAGATGGGTCTCTGCATATCCATGCACTCATCCAATTCAAAGGTAAAGCCAAGTTCAGAAACCCCAGACATTTCGATGTCACTCACCCTCATACCTCCACCCAATTCCATCCAAACTTCCAGGGAGCTAAGTCCAGCTCTGATGTTAAGTCCTACATCGAGAAGGACGGAGATTACATCGACTGGGGCACATTTCAGATCGATGGAAGATCTGCAAGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAAGCCCTAAATGCAGGTTCTAAAGAAGCAGCTATGGCTATAATAAGGGAAAAACTCCCAGAAAAATTTATTTTTCAATATCATAATTTAAATAGTAATTTAGATAGGATTTTCACTCCTCCGTTGGAGGTTTATGTTTCTCCTTTTTTATCTTCTTCTTTTAATCAAGTTCCTGAAGAACTTGAAGAGTGGGTCTCCGAGAATGTCATGGATGCCGCTGCGCGGCCTCTGAGGCCTCAAAGTATAGTGATTGAGGGAGACAGTCGTACGGGTAAAACGATGTGGGCTAGGTCATTAGGGCCTCATAATTACTTATGCGGTCATTTAGATTTAAGCCCCAAAGTTTACAGCAATGATGCGTGGTATAACGTCATTGATGATGTCGATCCGCACTTCCTCAAGCACTTTAAAGAGTTCATGGGGGCCCAAAGGGACTGGCAATCAAACACAAAGTACGGGAAGCCAGTTCAAATTAAAGGTGGAATACCCACAATCTTCCTCTGCAATCCTGGGCCAAACTCATCTTATAAAGAATATCTGGACGAGGAAAAGAACCAAGCCCTAAAAAACTGGGCAGTTAAGAATGCAGTCTTCATCACCCTCGAGGAACCACTGTACTCAATTGCCCATCAAAGTCCAGCACAGGGAGGCCAAGAGGAGGACCAGGAGGAGGAGAGTGGATCTTGA |
Protein Sequence | MPRNNSFCINAKNIFLTFPKCPIPKEQMLDILSNISCPSDKLFIRVAQEKHQDGSLHIHALIQFKGKAKFRNPRHFDVTHPHTSTQFHPNFQGAKSSSDVKSYIEKDGDYIDWGTFQIDGRSARGGQQTANDAAAEALNAGSKEAAMAIIREKLPEKFIFQYHNLNSNLDRIFTPPLEVYVSPFLSSSFNQVPEELEEWVSENVMDAAARPLRPQSIVIEGDSRTGKTMWARSLGPHNYLCGHLDLSPKVYSNDAWYNVIDDVDPHFLKHFKEFMGAQRDWQSNTKYGKPVQIKGGIPTIFLCNPGPNSSYKEYLDEEKNQALKNWAVKNAVFITLEEPLYSIAHQSPAQGGQEEDQEEESGS |
NCBI Accession | NP_795355.1 |
---|---|
Location | 2177-2434 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGGGTCTCTGCATATCCATGCACTCATCCAATTCAAAGGTAAAGCCAAGTTCAGAAACCCCAGACATTTCGATGTCACTCACCCTCATACCTCCACCCAATTCCATCCAAACTTCCAGGGAGCTAAGTCCAGCTCTGATGTTAAGTCCTACATCGAGAAGGACGGAGATTACATCGACTGGGGCACATTTCAGATCGATGGAAGATCTGCAAGAGGAGGTCAACAGACAGCTAATGATGCTGCTGCAGAAGCCCTAA |
Protein Sequence | MGLCISMHSSNSKVKPSSETPDISMSLTLIPPPNSIQTSRELSPALMLSPTSRRTEITSTGAHFRSMEDLQEEVNRQLMMLLQKP |
1 |
Palchoudhury S, et al. J Virol Methods. 2022 Feb;300:114369. doi: 10.1016/j.jviromet.2021.114369. Epub 2021 Nov 20. PMID: 34813823 |
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2 |
Iqbal MJ, et al. Virus Res. 2023 Aug;333:199144. doi: 10.1016/j.virusres.2023.199144. Epub 2023 Jun 7. PMID: 37271420 |
3 |
Zubair M, et al. Sci Rep. 2017 Apr 6;7(1):680. doi: 10.1038/s41598-017-00727-2. PMID: 28386113 |
4 |
Kirthi N, et al. Arch Virol. 2004 Oct;149(10):2047-57. doi: 10.1007/s00705-004-0352-5. PMID: 15669112 |
5 |
Jailani AAK, et al. Arch Virol. 2021 Oct;166(10):2905-2909. doi: 10.1007/s00705-021-05179-8. Epub 2021 Aug 12. PMID: 34383166 |
6 |
Venkataravanappa V, et al. Virusdisease. 2022 Jun;33(2):194-207. doi: 10.1007/s13337-022-00772-0. Epub 2022 Jul 1. PMID: 35991698 |