Genus | Begomovirus |
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NCBI Assembly | GCF_000867685.1 |
Isolate | Mexico: Yucatan |
Release date | 2015/2/13 |
Submitter | Hernandez-Zepeda,C., Idris,A.M., Carnevali,G., Brown,J.K., Moreno-Valenzuela,O.A. |
Host | |
Vector | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_794162.1 |
---|---|
Location | 191-946 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGCGATCTCCCATGGCGCTCGATCGCGGGAACTTCAAAGGTTAGCCGCAATGCTAATTATTCTCCTCGTGCAGGAAGTGGGCCAAGAGTAAACAAGGCCGCTGAATGGGTTAACAGGCCCATGTACAGAAAGCCCAGGATCTACCGGATGAGGAGGACTCCTGATGTGCCCAGAGGCTGTGAAGGGCCTTGTAAGGTCCAGTCCTATGAACAGCGTCACGATATCTCACATGTCGGTAAGGTTATGTGCATCTCCGATGTGACACGTGGTAATGGGATCACCCATCGTGTTGGTAAGCGTTTCTGTGTTAAGTCTGTGTATATCCTCGGTAAGATCTGGATGGATGAGAACATCAAGCTCAAGAACCACACGAACAGTGTTATGTTCTGGTTGGTCAGGGACCGTAGACCGTATGGCACGCCAATGGATTTCGGTCAGGTGTTCAACATGTTCGACAACGAGCCCAGCACTGCTACGGTGAAGAACGATCTACGAGATCGTTACCAGGTCATGCACAAGTTCTATGGCAAAGTGACAGGTGGACAGTATGCCAGCAATGAACAGTCTATAGTGCAGAGATTCTGGAAGGTCAACAATCATGTGGTGTACAACCACCAAGAGGCTGGCAAGTACGAGAATCACACGGAGAACGCTCTGTTATTGTATATGGCATGTACTCATGCCTCTAACCCTGTGTATGCAACGCTTAAGATTCGAATCTACTTCTACGATTCGATAACGAATTAA |
Protein Sequence | MPKRDLPWRSIAGTSKVSRNANYSPRAGSGPRVNKAAEWVNRPMYRKPRIYRMRRTPDVPRGCEGPCKVQSYEQRHDISHVGKVMCISDVTRGNGITHRVGKRFCVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRYQVMHKFYGKVTGGQYASNEQSIVQRFWKVNNHVVYNHQEAGKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSITN |
NCBI Accession | YP_794163.1 |
---|---|
Location | 943-1341 |
Gene Name | AC3 |
Protein Name | replication enhancer protein |
Coding Region | ATGGATTCACGCACAGGGGAACTCATCACTGCACGTCAGGCAGAGAATGGCGTCTATATCTGGGAGATCGAAAATCCCCTCTATTTCAAGATGTACCGAGTAGAGGAACCGTTATACACGAGGACCAGGGTCTACCACGTACAGATAAGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCTTACCTGAATTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGCCGATCTATTTAGCTAGACTTAAGCACTTAGTGCATATGTACTTAGATCAATTAGGCGTCATTAGTCTTAACAATGTAATTAGAGCTGTTCGATTCGCAACGGACAGATCGTATGTCAACTATGTACTGGAAAATCATTCAATAAAATTTAAATTTTATTAA |
Protein Sequence | MDSRTGELITARQAENGVYIWEIENPLYFKMYRVEEPLYTRTRVYHVQIRFNHNLRRALHLHKAYLNFQVWTTSMTASGPIYLARLKHLVHMYLDQLGVISLNNVIRAVRFATDRSYVNYVLENHSIKFKFY |
NCBI Accession | YP_794164.1 |
---|---|
Location | 1088-1477 |
Gene Name | AC2 |
Protein Name | transactivator protein |
Coding Region | ATGCGGTCTTCATCACCCTCACATCCGCCCTCTATCAAGRCAGCACACAGGCAAGCCAAGAAGAGGGCCATCAGGAGGAGGCGGATTGATCTGGAGTGCGGGTGCTCCATATACTTTCACATAGGCTGTACCGGGCATGGATTCACGCACAGGGGAACTCATCACTGCACGTCAGGCAGAGAATGGCGTCTATATCTGGGAGATCGAAAATCCCCTCTATTTCAAGATGTACCGAGTAGAGGAACCGTTATACACGAGGACCAGGGTCTACCACGTACAGATAAGGTTCAACCACAACCTGAGGAGAGCGTTGCATCTCCACAAAGCTTACCTGAATTTCCAAGTCTGGACGACATCGATGACAGCTTCTGGGCCGATCTATTTAGCTAG |
Protein Sequence | MRSSSPSHPPSIKXAHRQAKKRAIRRRRIDLECGCSIYFHIGCTGHGFTHRGTHHCTSGREWRLYLGDRKSPLFQDVPSRGTVIHEDQGLPRTDKVQPQPEESVASPQSLPEFPSLDDIDDSFWADLFS |
NCBI Accession | YP_794165.1 |
---|---|
Location | 1389-2474 |
Gene Name | AC1 |
Protein Name | REP protein |
Coding Region | ATGCCACGAAAGGGTTCTTTCTCAATCAAAGCCAAAAACTATTTCCTCACATACCCCCAGTGCTCTCTTACTAAAGAAGAAGCACTTTCCCAATTACAAAACCTAAATACTCCAGTGAACAAGAAGTTCATCAAGATCTGCAGAGAACTTCATGAGAATGGGGAGCCTCATCTCCACGTGCTCATACAGTTCGAAGGGAAATACAACTGCACGAATAACAGATTCTTCGATCTGGTGTCCCCAACCAGGTCAATACATTTCCATCCGAACATTCAGGGAGCTAAATCCAGCTCCGACGTCAAGTCCTACGTCGAGAAAGACGGCGACACCATCGAATGGGGGGTGTTCCAGATCGACGGTAGAAGTGCTCGAGGAGGTCAGCAGACATCTAACGATGCAGCCGCCGAGGCGTTGAACTCTGGAACAAAGGAGGAGGCTATGAAAATCATCAAAGAGAAGCTGCCGGAGAAGTATCTCTTTCAGTTTCACAACCTATCCAGTAACCTCGATAGGATTTTCAGTAAGCCTCCAAAGCTTTGGGAACCTCCGTTTCCCCTCTCCTCTTTCACTAACGTGCCGGACGAGATGCAAGAGTGGGCGGACGATTATTTTGGGAGAGGTTCCGCTGCGCGGCCGGAAAGACCTGTTAGTCTCATAGTAGAGGGTGACTCGAGGACAGGGAAGACGATGTGGGCTCGTGCGTTAGGCCCACATAATTATCTTAGTGGACACCTGGATTTCAATGCCCGGTGCTATTCGAACGAAGTGGAGTATAACGTCATTGATGACGTCGCACCGCACTATCTAAAGCTAAAGCACTGGAAAGAACTTCTGGGGGCCCAGAAGGACTGGCAGTCAAATTGCAAATACGGCAAGCCAGTTCAAATTAAAGGAGGGATCCCATCAATCGTGCTTTGCAATCCAGGTGAGGGTGCCAGCTATAAAGATTTCCTGGACAAAGAGGAAAACTCAGCTCTCAGGAACTGGACTCTCAAGAATGCGGTCTTCATCACCCTCACATCCGCCCTCTATCAAGRCAGCACACAGGCAAGCCAAGAAGAGGGCCATCAGGAGGAGGCGGATTGA |
Protein Sequence | MPRKGSFSIKAKNYFLTYPQCSLTKEEALSQLQNLNTPVNKKFIKICRELHENGEPHLHVLIQFEGKYNCTNNRFFDLVSPTRSIHFHPNIQGAKSSSDVKSYVEKDGDTIEWGVFQIDGRSARGGQQTSNDAAAEALNSGTKEEAMKIIKEKLPEKYLFQFHNLSSNLDRIFSKPPKLWEPPFPLSSFTNVPDEMQEWADDYFGRGSAARPERPVSLIVEGDSRTGKTMWARALGPHNYLSGHLDFNARCYSNEVEYNVIDDVAPHYLKLKHWKELLGAQKDWQSNCKYGKPVQIKGGIPSIVLCNPGEGASYKDFLDKEENSALRNWTLKNAVFITLTSALYQXSTQASQEEGHQEEAD |
NCBI Accession | YP_794166.1 |
---|---|
Location | 383-1159 |
Gene Name | BV1 |
Protein Name | BV1 |
Coding Region | ATGATCATGTATCCTGTGAGGAATAAACGTGTTGGTTACTTCCCTAATCGACGATATACCTATCGTAATAATGTGTTTAACCGTTCAGCCTATGTGAAACGACATGATGGGAAACGACGTGGAAGTCGATATGTCAAGCCCAATGACGAGCCCAAGATGTCAGTCCAATCCATACACGAAAATCAGTATGGCACTGATTTTGTCATGGCCCATAATTCAGCTATCTCGACGTTCATCAGTTACCCGGACTTGGGTAAGATGGAACCGGGCCGAAGCAGGTCATATATCAAGTTGAAACGACTCCGTTTCAAAGGGACGGTGAAGATTGAACGTGTGCAATCGGATATGAACATGGACGGGACTCTCCCCAAAATAGAAGGAGTCTTCTCTCTTGTTGTTGTTGTTGATCGGAAACCCCACTTGGGTCCAAGTGGTTGTCTGCATACATTCGACGAGCTGTTCGGAGCAATCATTCACAGCCATGGCAATCTCAGCATTGTCCCTTCTCTGAAAGACCGTTATTATATTCGCCATGTGTTCAAACGCGTATTGTCATTGGAGAATGACACGCTGATGGTCGACGTTGAAGGATCTACAGCTCTATCTAACAGGCGTTTTAATTGTTGGTCCACGTTCAAAGACGTTGATCGTGATGCATGCAAGGGTGTTTATGATAATATAAGCAAGAACGCCCTGTTAATTTATTATTGCTGGGTGTCCGATACGCCTTCGAAGGCATCTAATTATGTATCTTTTGATCTTGATTATGTTGGTTAA |
Protein Sequence | MIMYPVRNKRVGYFPNRRYTYRNNVFNRSAYVKRHDGKRRGSRYVKPNDEPKMSVQSIHENQYGTDFVMAHNSAISTFISYPDLGKMEPGRSRSYIKLKRLRFKGTVKIERVQSDMNMDGTLPKIEGVFSLVVVVDRKPHLGPSGCLHTFDELFGAIIHSHGNLSIVPSLKDRYYIRHVFKRVLSLENDTLMVDVEGSTALSNRRFNCWSTFKDVDRDACKGVYDNISKNALLIYYCWVSDTPSKASNYVSFDLDYVG |
NCBI Accession | YP_794167.1 |
---|---|
Location | 1221-2102 |
Gene Name | BC1 |
Protein Name | movement protein |
Coding Region | ATGGAATCTCAGCTAGTCAATCCTCCACATGCCTTCAATTACATAGAGTCTCACCGCGACGAGTATCAGCTTTCTCATGACCTGACTGAAATAATACTGCAATTTCCTTCCACGGCGGCGCAGTTGACGGCAAGGCTTCATCGGAGCTGTATGAAAATCGACCACTGCGTCATAGAGTACAGGCAACAGGTACCAATCAACGCCGCCGGGACGGTAATAGTGGAGATCCACGACAAAAGGATGACAGATAACGAATCATTACAGGCATCGTGGACTYTTCCGATCAGATGCAACATAGATCTCCACTACTTCTCAGCTTCCTTTTTCTCCCTCAAAGACCCAATCCCGTGGAAACTCTATTACAGAGTTTCCGATACGAATGTTCATCAGAGGACCCACTTCGCCAAGTTCAAAGGGAAGCTGAAACTGTCGACGGCCAAACATTCGGTGGATATCCCGTTCCGGGCACCAACAGTGAAGATCCTTTCCAAACAGTTCACGGACAAGGATGTGGACTTTTGGCACGTCGACTACGGAAGAACGGARAGGAAGCCCATCAGATGCGCATCAATGTCCAGAGTTGGGTTACGAGGCCCAATCGATATAAGGCCTGGCGAGTCATGGGCTTCCAGGAGTACAATAGGTACGGGCCAATCTGAGGCGGACTCAGAGGTGGAGAACGAGCTCCACCCATACAGACACCTGAACAGGCTCGGGACGAGCGTTCTAGATCCAGGAGAGTCTGCTTCAATCGTGGGAGCCCAGAGAGCGGAGTCCAACATCACATTGTCCATGGGCCAATTGAACGAAATAGTTAGGACTACGGTCCAAGAATGTATTAATAATAACTGTCAAGCTTCTCAAGCCAAGTCATTGAAATAA |
Protein Sequence | MESQLVNPPHAFNYIESHRDEYQLSHDLTEIILQFPSTAAQLTARLHRSCMKIDHCVIEYRQQVPINAAGTVIVEIHDKRMTDNESLQASWTXPIRCNIDLHYFSASFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKILSKQFTDKDVDFWHVDYGRTERKPIRCASMSRVGLRGPIDIRPGESWASRSTIGTGQSEADSEVENELHPYRHLNRLGTSVLDPGESASIVGAQRAESNITLSMGQLNEIVRTTVQECINNNCQASQAKSLK |
1 |
Ghosh R, et al. Indian J Virol. 2012 Jun;23(1):70-4. doi: 10.1007/s13337-012-0062-7. Epub 2012 Mar 25. PMID: 23730007 |
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2 |
Characterization of sida golden mottle virus isolated from Sida santaremensis Monteiro in Florida. Al-Aqeel HA, et al. Arch Virol. 2018 Oct;163(10):2907-2911. doi: 10.1007/s00705-018-3903-x. Epub 2018 Jun 21. PMID: 29931396 |
3 |
Fiallo-Olivé E, et al. Arch Virol. 2012 Jan;157(1):141-6. doi: 10.1007/s00705-011-1123-8. Epub 2011 Oct 1. PMID: 21964921 |
4 |
Collins A, et al. Virus Res. 2010 Jun;150(1-2):148-52. doi: 10.1016/j.virusres.2010.03.008. Epub 2010 Mar 25. PMID: 20347895 |