Genus | Begomovirus |
---|---|
NCBI Assembly | GCF_003029365.2 |
Isolate | Cuba |
Release date | 2018/12/27 |
Host | |
Download | Genome |GFF3 |PEP |CDS |
NCBI Accession | YP_009547938.1 |
---|---|
Location | 343-1110 |
Gene Name | BV1 |
Protein Name | NSP |
Coding Region | ATGTATTCTTCTAAATATAAACGTGGTGTGTCTAATTATCAACGACGTGGTTATATTCGTAATCAAGTCTTGCGAAAAGCATCTTTTAAACGTTATGATGGCAAACGTCGACAAATTCATGGTGGTAAGGTTTATGATGATTCTAAAATGTTGGATCAACGGTTACATGAAAATCAATTTGGACCTGAATTTGTTATGGGTCAGAATGGTGCTATATCGACGTTTATTAGTTTCCCTCAATTGGGTAAGAATAAACCCAATCGAACTAGGTCATATATTAAATTAAAACGTTTGCGATTAAAAGGTACTGTTAAAATAGAGCGTGTTCGTAATGATATGAATATGGATGGTATTTCCTCAAAAATCGAAGGTGTATTCTCTATGGTTGTTGTGGTGGATCGTAAACCACATCTTGGTCCGTCTGGGAATCTACCAACATTTGAAGATTTATTCGGTGCAAGGATTAATAGTCATGGTAACTTAGCAATAATTCCGTCAATGGAGGACCGTTTTTATATACGACATGTTACGAAGCGAGTATTATCCGTGGATAATGACACAATGATGATCGATGTTGAAGGTTATACAAAATTGTCTAATAGGCGATATAATATGTGGTCTACGTTTAAGGATATAGACCATGAATCAAGTAATGGGGCCTATGATAATATTAGTAAAAATGCGATTTTAGTGTATTACTGTTGGATGTCGGATAATATGTCAAAGGCATCTACATTTGTATCATTTGATCTTGATTATGTGGGTTGA |
Protein Sequence | MYSSKYKRGVSNYQRRGYIRNQVLRKASFKRYDGKRRQIHGGKVYDDSKMLDQRLHENQFGPEFVMGQNGAISTFISFPQLGKNKPNRTRSYIKLKRLRLKGTVKIERVRNDMNMDGISSKIEGVFSMVVVVDRKPHLGPSGNLPTFEDLFGARINSHGNLAIIPSMEDRFYIRHVTKRVLSVDNDTMMIDVEGYTKLSNRRYNMWSTFKDIDHESSNGAYDNISKNAILVYYCWMSDNMSKASTFVSFDLDYVG |
NCBI Accession | YP_009547939.1 |
---|---|
Location | 1170-2051 |
Gene Name | BC1 |
Protein Name | MP |
Coding Region | ATGGATTCTCAGTTAGCAAATGCTCCAAATGCGTTTAATTACATAGAATCCCATAGGGATGAATATCAACTGTCTCATGATCTAACTGAGATAATTCTTCAATTTCCTTCAACAGCAGCACAATTAACAGCAAGGCTCAGTCGTAGCTGTATGAAAATTGACCATTGCGTCATTGAATATAGGCAGCAAGTACCAATAAACGCTACTGGCACAGTCATTGTAGAGATCCATGACAAAAGAATGACTGACGATGAATCATTACAAGCATCATGGACATTTCCACTACGATGCAACATAGATCTCCATTACTTTTCCTCTTCCTTCTTCTCGCTAAAAGACCCAATACCATGGAAACTGTATTATAGAGTTAGCGACACAAACGTACATCAAAGAACACATTTTGCCAAGTTTAAGGGTAAATTAAAATTATCCACGGCTAAACATTCAGTGGATATACCCTTCCGAGCACCAACAGTGAAAATTCACTCCAAACAATTTTCACATAAAGATGTTGATTTTTCGCATGTGGACTACGGTCGATGGGAACGAAAAACATTAAGGTCCACATCCATATCCAGAGTTGCTCTACCAGGCCCAATTGAATTGAGACCAGGAGAGTCATGGGCCGCCAAAAGCACAATTGGGCTTACTCATACAGATACGGATTCTGAAATAGAAAACGCAATACATCCATACAGACAACTGAATCGTTTAGGATCAAGCGCAATAGACCCAGGTGATTCAGCATCACAAGCAGGGTTGCAAAGAACCCAATCAAACATTACAATGTCAGTGGCCCAATTAAGCGATCTTGTTAGGACAACGGTTCAAGAATGTATAAACAATAATTGTATTCCAAATCAGCCCAAAGCATTGAAATAA |
Protein Sequence | MDSQLANAPNAFNYIESHRDEYQLSHDLTEIILQFPSTAAQLTARLSRSCMKIDHCVIEYRQQVPINATGTVIVEIHDKRMTDDESLQASWTFPLRCNIDLHYFSSSFFSLKDPIPWKLYYRVSDTNVHQRTHFAKFKGKLKLSTAKHSVDIPFRAPTVKIHSKQFSHKDVDFSHVDYGRWERKTLRSTSISRVALPGPIELRPGESWAAKSTIGLTHTDTDSEIENAIHPYRQLNRLGSSAIDPGDSASQAGLQRTQSNITMSVAQLSDLVRTTVQECINNNCIPNQPKALK |
NCBI Accession | YP_009508412.1 |
---|---|
Location | 198-947 |
Gene Name | AV1 |
Protein Name | coat protein |
Coding Region | ATGCCTAAGCGGGATGCCCCGTGGCGTTCTAATGCGGGGACCTCTAAGGTTAGCCGTAATTTGAATTACTCTCCTCGTGGAGGCCCAAAATCCAATAAGGCCAACGATTGGGTTAATAGGCCCATGTATAGAAAGCCCAGGTTTTATCGGATGTACAGGACTCCCGATGTACCTAGAGGATGTGAAGGGCCATGTAAGATCCAGTCGTTTGAACAACGCCATGATGTGTCTCACCTTGGTAAGGTTATGTGTATATCTGACGTGACACGTGGTAACGGTATTACCCATCGCGTTGGAAAACGTTTCTGTATCAAGTCTGTGTATATTTTAGGCAAGGTATGGATGGATGACAATATCAAGTTAAAGAATCACACCAACAGTGTTATGTTTTGGTTGGTTAGGGATAGGAGACCATATGGCACTCCCATGGATTTTGGTCAAGTTTTTAATATGTTTGATAATGAACCAAGTACTGCTACGGTTAAGAACGATCTTCGTGATCGTTTCCAGGTCTTGCACAAGTTTTATTCTAAGGTTACAGGTGGACAATATGCGAGTAATGAACAATCACTCGTTAAGCGATTTTGGAAGGTTAACAACCATGTGGTGTATAACCATCAGGAAGCGGCTAAGTACGAGAATCACACTGAAAATGCTCTATTATTGTATATGGCATGTACTCATGCGTCTAATCCTGTGTATGCTACATTGAAAATTCGGATCTATTTTTACGATTCGATAATGAATTAA |
Protein Sequence | MPKRDAPWRSNAGTSKVSRNLNYSPRGGPKSNKANDWVNRPMYRKPRFYRMYRTPDVPRGCEGPCKIQSFEQRHDVSHLGKVMCISDVTRGNGITHRVGKRFCIKSVYILGKVWMDDNIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATVKNDLRDRFQVLHKFYSKVTGGQYASNEQSLVKRFWKVNNHVVYNHQEAAKYENHTENALLLYMACTHASNPVYATLKIRIYFYDSIMN |
NCBI Accession | YP_009508413.1 |
---|---|
Location | 944-1342 |
Gene Name | AC3 |
Protein Name | REn |
Coding Region | ATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAGGCAACGAATGGCGTTTTTATTTGGGAGGTTCCAAATCCCCTATATTTCAAGATCGTATGGGTGGAACATCCAATATACACACGCAGCAAGGTGTTCCAAATACAAATCCGAGCCAACCACAACCTCAGGAAAGCGTTGGCTCTCCACAAAGCCTACTTCAATTTCCAAGTCTGGACGACTTTGACGACAGCTTCTGGGAAGAATTATTTAAGTAGATTCAAATTTATTGTCATGTATTACTTAGACAATTTAGGTGTTATTTCAGTTAACAATATTATTAGAGCTGTCTCATATGCAACAGACAAACATTATGTAAATGATGTACTTGAAGATCATGATATAAAATATAAACTTTATTAA |
Protein Sequence | MDSRTGEPITAAQATNGVFIWEVPNPLYFKIVWVEHPIYTRSKVFQIQIRANHNLRKALALHKAYFNFQVWTTLTTASGKNYLSRFKFIVMYYLDNLGVISVNNIIRAVSYATDKHYVNDVLEDHDIKYKLY |
NCBI Accession | YP_009508414.1 |
---|---|
Location | 1089-1505 |
Gene Name | AC2 |
Protein Name | TrAP |
Coding Region | ATGACTGGGCACAAAAAAACGCCATCTACGTCTCAATTGAGAGACCACTGTTCTCCTCCGTCAATCAAACCTCGCCATCGATACGCGAAGAGACAAACGAGGCGTAAAAGAATTGATCTGCAGTGCGGCTGTTCAATTTACGTTCACATCAACTGCAACAATCATGGATTCACGCACAGGGGAACCCATCACTGCAGCTCAGGCAACGAATGGCGTTTTTATTTGGGAGGTTCCAAATCCCCTATATTTCAAGATCGTATGGGTGGAACATCCAATATACACACGCAGCAAGGTGTTCCAAATACAAATCCGAGCCAACCACAACCTCAGGAAAGCGTTGGCTCTCCACAAAGCCTACTTCAATTTCCAAGTCTGGACGACTTTGACGACAGCTTCTGGGAAGAATTATTTAAGTAG |
Protein Sequence | MTGHKKTPSTSQLRDHCSPPSIKPRHRYAKRQTRRKRIDLQCGCSIYVHINCNNHGFTHRGTHHCSSGNEWRFYLGGSKSPIFQDRMGGTSNIHTQQGVPNTNPSQPQPQESVGSPQSLLQFPSLDDFDDSFWEELFK |
NCBI Accession | YP_009508415.1 |
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Location | 1399-2475 |
Gene Name | AC1 |
Protein Name | Rep |
Coding Region | ATGCCACTCCAGAAACGCTTTCGTTTAAATGCAAAGAACTACTTCCTCACATATCCAAAATGTTCTCTTTCTAAAGAAGAGGCATTATCACAATTACAACAATTATCCACACCTGTCAACAAAAAATACATCAAGATCTGCAGCGAATTGCATGAAGATGGGCAACCACATCTGCATGTTCTCATCCAATTCGAAGGTAAATACCAATGCGCGAATAATAGATTCTTCGACCTGGTATCCACAACCAGGTCAACACATTTCCATCCGAACATTCAGGGAGCTAAATCTAGCTCAGACGTCAAATCCTACATCGACAAAGACGGGGATACACTCGAATGGGGAGAGTTTCAAATAGACGGCAGATCAGCTAGAGGAGGTAAGCAATCTGCTAATGATTCATATGCAAAGGCCTTAAATGCAGAATCCATAGACGAAGCATTAAAGATCATTAAAGAGGAACAACCCAAAGATTATCTCCTTCAACATCATAACATACATAATAATCTCCAACGAATCTTCGCAAAGGCCCCGGAACAATGGGTTCCTCCATATCAATCATCAACGTTTGATAATGTTCCTCAAGTCATGAAAGACTGGGTTAGTCATAATGTTGTCGATGCCGCTGCGCGGCCATTGAGACCTATTTCAATTATTATTGAAGGATCATCAAGAACAGGCAAAACATTATGGGCCCGAAGTCTGGGCCCTCATAATTATTTATGTGGTCATATCGATCTCAATCCACGCATATACTCCAATGATGCTTGGTATAACGTCATCGACGACGTAGATCCGCATTATCTCAAACACTTTAAAGAGTTCATGGGGGCCCAAAGAAATTGGCAATCAAACTGCAAATACGGAAAGCCAATTCAAATTAAAGGAGGAATTCCCACTATCTTCCTTTGCAATCCTGGCCCCCATTCATCATATAAAGAGTATCTCGGCGAGGACAAGAACAGATCACTCAATGACTGGGCACAAAAAAACGCCATCTACGTCTCAATTGAGAGACCACTGTTCTCCTCCGTCAATCAAACCTCGCCATCGATACGCGAAGAGACAAACGAGGCGTAA |
Protein Sequence | MPLQKRFRLNAKNYFLTYPKCSLSKEEALSQLQQLSTPVNKKYIKICSELHEDGQPHLHVLIQFEGKYQCANNRFFDLVSTTRSTHFHPNIQGAKSSSDVKSYIDKDGDTLEWGEFQIDGRSARGGKQSANDSYAKALNAESIDEALKIIKEEQPKDYLLQHHNIHNNLQRIFAKAPEQWVPPYQSSTFDNVPQVMKDWVSHNVVDAAARPLRPISIIIEGSSRTGKTLWARSLGPHNYLCGHIDLNPRIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRNWQSNCKYGKPIQIKGGIPTIFLCNPGPHSSYKEYLGEDKNRSLNDWAQKNAIYVSIERPLFSSVNQTSPSIREETNEA |
NCBI Accession | YP_009508416.1 |
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Location | 2121-2447 |
Gene Name | AC4 |
Protein Name | AC4 protein |
Coding Region | ATGCAAAGAACTACTTCCTCACATATCCAAAATGTTCTCTTTCTAAAGAAGAGGCATTATCACAATTACAACAATTATCCACACCTGTCAACAAAAAATACATCAAGATCTGCAGCGAATTGCATGAAGATGGGCAACCACATCTGCATGTTCTCATCCAATTCGAAGGTAAATACCAATGCGCGAATAATAGATTCTTCGACCTGGTATCCACAACCAGGTCAACACATTTCCATCCGAACATTCAGGGAGCTAAATCTAGCTCAGACGTCAAATCCTACATCGACAAAGACGGGGATACACTCGAATGGGGAGAGTTTCAAATAG |
Protein Sequence | MQRTTSSHIQNVLFLKKRHYHNYNNYPHLSTKNTSRSAANCMKMGNHICMFSSNSKVNTNARIIDSSTWYPQPGQHISIRTFRELNLAQTSNPTSTKTGIHSNGESFK |
1 |
Mulenga RM, et al. Plant Dis. 2022 Sep;106(9):2380-2391. doi: 10.1094/PDIS-11-21-2533-RE. Epub 2022 Aug 12. PMID: 35188414 |
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2 |
Interactions between Common Bean Viruses and Their Whitefly Vector. Ferreira AL, et al. Viruses. 2024 Oct 2;16(10):1567. doi: 10.3390/v16101567. PMID: 39459901 |
3 |
Virus-induced gene silencing in soybean and common bean. Zhang C, et al. Methods Mol Biol. 2013;975:149-56. doi: 10.1007/978-1-62703-278-0_11. PMID: 23386301 |
4 |
Molecular Characteristics of Bean Common Mosaic Virus Occurring in Inner Mongolia, China. Li J, et al. Genes (Basel). 2024 Jan 21;15(1):133. doi: 10.3390/genes15010133. PMID: 38275614 |
5 |
Yang QQ, et al. Sci Rep. 2022 Jan 13;12(1):681. doi: 10.1038/s41598-021-03562-8. PMID: 35027575 |
6 |
Sword Bean (Canavalia gladiata): a new host of Bean common mosaic virus. Verma R, et al. Mol Biol Rep. 2023 Oct;50(10):8777-8781. doi: 10.1007/s11033-023-08769-8. Epub 2023 Aug 31. PMID: 37651019 |
7 |
Kareem KT, et al. Virusdisease. 2023 Jun;34(2):204-212. doi: 10.1007/s13337-023-00812-3. Epub 2023 Apr 7. PMID: 37408549 |
8 |
An effective virus-based gene silencing method for functional genomics studies in common bean. Díaz-Camino C, et al. Plant Methods. 2011 Jun 13;7:16. doi: 10.1186/1746-4811-7-16. PMID: 21668993 |
9 |
Meziadi C, et al. Theor Appl Genet. 2023 Dec 13;137(1):8. doi: 10.1007/s00122-023-04513-9. PMID: 38092992 |
10 |
First Report of Bean common mosaic virus Infecting Lablab purpureus in India. Udayashankar AC, et al. Plant Dis. 2011 Jul;95(7):881. doi: 10.1094/PDIS-01-11-0009. PMID: 30731707 |